RID=1168939066-6017-42492802592.BLASTQ4, Contig134

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168939066-6017-42492802592.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Score E Sequences producing significant alignments: (Bits) Value gi|115449865|ref|NP_001048570.1| Os02g0823600 [Oryza sativa (... 82.8 5e-16

gi|18414237|ref|NP_568120.1| unknown protein [Arabidopsis tha... 75.9 6e-14

gi|42565409|gb|AAS20978.1| F12E4.230-like protein [Hyacinthus or 69.7 4e-12

Alignments

 

>gi|115449865|ref|NP_001048570.1|  Os02g0823600 [Oryza sativa (japonica cultivar-group)]
 gi|48716311|dbj|BAD22924.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|48717083|dbj|BAD22856.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113538101|dbj|BAF10484.1|  Os02g0823600 [Oryza sativa (japonica cultivar-group)]
Length=85

 Score = 82.8 bits (203),  Expect = 5e-16
 Identities = 34/43 (79%), Positives = 40/43 (93%), Gaps = 0/43 (0%)
 Frame = +1

Query  43   MVCIACLLPLFLVPIVNILPLLFHYIMGKIYKLFGWEYRKPER  171
            MVC+ACLLPLFL+P+VN LPLLFH I+ KIY+LFGWEYR+PER
Sbjct  1    MVCLACLLPLFLIPVVNALPLLFHLILSKIYRLFGWEYRRPER  43


>gi|18414237|ref|NP_568120.1|  unknown protein [Arabidopsis thaliana]
 gi|7378630|emb|CAB83306.1|  putative protein [Arabidopsis thaliana]
 gi|15028373|gb|AAK76663.1|  unknown protein [Arabidopsis thaliana]
 gi|21537152|gb|AAM61493.1|  unknown [Arabidopsis thaliana]
 gi|22136792|gb|AAM91740.1|  unknown protein [Arabidopsis thaliana]
Length=89

 Score = 75.9 bits (185),  Expect = 6e-14
 Identities = 50/90 (55%), Positives = 62/90 (68%), Gaps = 4/90 (4%)
 Frame = +1

Query  43   MVCIACLLPLFLVPIVNILPLLFHYIMGKIYKLFGWEYRKPERappacpykpaakTENVK  222
            MVC+ CL+PLFLVP++N++P +  Y M K+Y   GWEYRKP R PPACP+KP AK +N  
Sbjct  1    MVCVMCLVPLFLVPLINLMPRIIDYFMAKLYAWLGWEYRKPARVPPACPFKPVAKNDNAT  60

Query  223  KVGPETVPGSIPESSSKP--VEVTDG-KQD  303
            KVG ET      E+ +KP  VE T G KQD
Sbjct  61   KVGAETGTEG-TETIAKPGVVEETGGIKQD  89


>gi|42565409|gb|AAS20978.1|  F12E4.230-like protein [Hyacinthus orientalis]
Length=86

 Score = 69.7 bits (169),  Expect = 4e-12
 Identities = 27/40 (67%), Positives = 35/40 (87%), Gaps = 0/40 (0%)
 Frame = +1

Query  52   IACLLPLFLVPIVNILPLLFHYIMGKIYKLFGWEYRKPER  171
            +ACLLPLFL+P++N LP+L  +I+GK+Y LFGWEYRKP R
Sbjct  1    LACLLPLFLIPVINALPVLMDFILGKVYALFGWEYRKPAR  40

Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 359 Number of extensions: 9 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 476 Length of database: 101054579 Length adjustment: 104 Effective length of query: 372 Effective length of database: 71586283 Effective search space: 3865659282 Effective search space used: 3865659282 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)

Distribution of 3 Blast Hits on the Query Sequence