Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168939331-27030-101938381838.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig138 Length=932
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|62321216|dbj|BAD94384.1| ketol-acid reductoisomerase [Arabido 393 5e-109 gi|15231092|ref|NP_191420.1| ketol-acid reductoisomerase [Ara... 393 5e-109 gi|288063|emb|CAA48253.1| ketol-acid reductoisomerase [Arabidops 392 1e-108 gi|92874663|gb|ABE82897.1| Acetohydroxy acid isomeroreductase [M 386 6e-107 gi|6491802|emb|CAB61890.1| acetohydroxy acid isomeroreductase [P 385 1e-106 gi|6225542|sp|O82043|ILV5_PEA Ketol-acid reductoisomerase, ch... 385 1e-106 gi|266346|sp|Q01292|ILV5_SPIOL Ketol-acid reductoisomerase, c... 382 8e-106 gi|2554835|pdb|1YVE|I Chain I, Acetohydroxy Acid Isomeroreduc... 382 8e-106 gi|115438917|ref|NP_001043738.1| Os01g0652600 [Oryza sativa (... 380 5e-105 gi|115465569|ref|NP_001056384.1| Os05g0573700 [Oryza sativa (... 373 5e-103 gi|116056611|emb|CAL52900.1| unnamed protein product [Ostreococc 221 3e-57 gi|68052007|sp|P84534|ILV5_POPEU Ketol-acid reductoisomerase,... 33.5 1.2 gi|102139799|gb|ABF69984.1| male sterility protein-related [Musa 31.6 4.7
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 617 Number of extensions: 8 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 932 Length of database: 101054579 Length adjustment: 113 Effective length of query: 819 Effective length of database: 69036142 Effective search space: 13600119974 Effective search space used: 13600119974 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 67 (30.4 bits)