RID=1168939361-10466-4181841849.BLASTQ4, Contig140

Alignments
 

>gi|8886929|gb|AAF80615.1|AC069251_8  F2D10.18 [Arabidopsis thaliana]
Length=662

 Score =  148 bits (373),  Expect(2) = 2e-41
 Identities = 73/102 (71%), Positives = 86/102 (84%), Gaps = 1/102 (0%)
 Frame = +3

Query  105  QPGFDMKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFRE  284
            QP   MKG KSK++T+S+KLSV KKPA KG  +   A KDPNKPKRPASAFFVFME+FRE
Sbjct  373  QPESIMKGAKSKTETRSSKLSVTKKPA-KGAGRGKAAAKDPNKPKRPASAFFVFMEDFRE  431

Query  285  QYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
             +KK++PKNKSVA VGKA GDKWKS+S++EKAP+VAKAEK K
Sbjct  432  TFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRK  473


 Score = 40.8 bits (94),  Expect(2) = 2e-41
 Identities = 17/23 (73%), Positives = 20/23 (86%), Gaps = 0/23 (0%)
 Frame = +1

Query  412  VEYEKNMKAYNKRQAEGPKADDE  480
            VEYEKN+KAYNK+  EGPK D+E
Sbjct  474  VEYEKNIKAYNKKLEEGPKEDEE  496


 Score =  141 bits (356),  Expect(2) = 6e-40
 Identities = 70/97 (72%), Positives = 84/97 (86%), Gaps = 4/97 (4%)
 Frame = +3

Query  120  MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  299
            MKG KSK++T+S KLSV KKPA KG +    A KDPNKPKRP+SAFFVFME+FR  YK++
Sbjct  522  MKGAKSKAETRSTKLSVTKKPA-KGAKG---AAKDPNKPKRPSSAFFVFMEDFRVTYKEE  577

Query  300  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            HPKNKSVAAVGKAGG+KWKS+S++EKAP+VAKA+K K
Sbjct  578  HPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRK  614


 Score = 42.4 bits (98),  Expect(2) = 6e-40
 Identities = 18/23 (78%), Positives = 20/23 (86%), Gaps = 0/23 (0%)
 Frame = +1

Query  412  VEYEKNMKAYNKRQAEGPKADDE  480
            VEYEKNMKAYNK+  EGPK D+E
Sbjct  615  VEYEKNMKAYNKKLEEGPKEDEE  637


>gi|79318286|ref|NP_001031074.1|  HMGB2 (HIGH MOBILITY GROUP B 2) [Arabidopsis thaliana]
Length=142

 Score =  146 bits (368),  Expect(2) = 8e-41
 Identities = 71/97 (73%), Positives = 84/97 (86%), Gaps = 1/97 (1%)
 Frame = +3

Query  120  MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  299
            MKG KSK++T+S+KLSV KKPA KG  +   A KDPNKPKRPASAFFVFME+FRE +KK+
Sbjct  1    MKGAKSKTETRSSKLSVTKKPA-KGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKE  59

Query  300  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            +PKNKSVA VGKA GDKWKS+S++EKAP+VAKAEK K
Sbjct  60   NPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRK  96


 Score = 40.8 bits (94),  Expect(2) = 8e-41
 Identities = 17/23 (73%), Positives = 20/23 (86%), Gaps = 0/23 (0%)
 Frame = +1

Query  412  VEYEKNMKAYNKRQAEGPKADDE  480
            VEYEKN+KAYNK+  EGPK D+E
Sbjct  97   VEYEKNIKAYNKKLEEGPKEDEE  119


>gi|18394898|ref|NP_564123.1|  HMGB2 (HIGH MOBILITY GROUP B 2); transcription factor [Arabidopsis 
thaliana]
 gi|13877971|gb|AAK44063.1|AF370248_1  unknown protein [Arabidopsis thaliana]
 gi|2832359|emb|CAA74401.1|  HMG protein [Arabidopsis thaliana]
 gi|17104699|gb|AAL34238.1|  unknown protein [Arabidopsis thaliana]
 gi|21536964|gb|AAM61305.1|  unknown [Arabidopsis thaliana]
 gi|26452113|dbj|BAC43146.1|  unknown protein [Arabidopsis thaliana]
Length=144

 Score =  146 bits (368),  Expect(2) = 8e-41
 Identities = 71/97 (73%), Positives = 84/97 (86%), Gaps = 1/97 (1%)
 Frame = +3

Query  120  MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  299
            MKG KSK++T+S+KLSV KKPA KG  +   A KDPNKPKRPASAFFVFME+FRE +KK+
Sbjct  1    MKGAKSKTETRSSKLSVTKKPA-KGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKE  59

Query  300  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            +PKNKSVA VGKA GDKWKS+S++EKAP+VAKAEK K
Sbjct  60   NPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRK  96


 Score = 40.8 bits (94),  Expect(2) = 8e-41
 Identities = 17/23 (73%), Positives = 20/23 (86%), Gaps = 0/23 (0%)
 Frame = +1

Query  412  VEYEKNMKAYNKRQAEGPKADDE  480
            VEYEKN+KAYNK+  EGPK D+E
Sbjct  97   VEYEKNIKAYNKKLEEGPKEDEE  119


>gi|18394900|ref|NP_564124.1|  HMGB3 (HIGH MOBILITY GROUP B 3); transcription factor [Arabidopsis 
thaliana]
 gi|15724174|gb|AAL06479.1|AF411789_1  At1g20690/F2D10_15 [Arabidopsis thaliana]
 gi|1694976|emb|CAA70691.1|  HMG1 [Arabidopsis thaliana]
 gi|2832361|emb|CAA74402.1|  HMG protein [Arabidopsis thaliana]
 gi|20453325|gb|AAM19901.1|  At1g20690/F2D10_15 [Arabidopsis thaliana]
 gi|21537072|gb|AAM61413.1|  unknown [Arabidopsis thaliana]
 gi|22530942|gb|AAM96975.1|  expressed protein [Arabidopsis thaliana]
 gi|23198424|gb|AAN15739.1|  expressed protein [Arabidopsis thaliana]
Length=141

 Score =  141 bits (356),  Expect(2) = 7e-40
 Identities = 70/97 (72%), Positives = 84/97 (86%), Gaps = 4/97 (4%)
 Frame = +3

Query  120  MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  299
            MKG KSK++T+S KLSV KKPA KG +    A KDPNKPKRP+SAFFVFME+FR  YK++
Sbjct  1    MKGAKSKAETRSTKLSVTKKPA-KGAKG---AAKDPNKPKRPSSAFFVFMEDFRVTYKEE  56

Query  300  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            HPKNKSVAAVGKAGG+KWKS+S++EKAP+VAKA+K K
Sbjct  57   HPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRK  93


 Score = 42.4 bits (98),  Expect(2) = 7e-40
 Identities = 18/23 (78%), Positives = 20/23 (86%), Gaps = 0/23 (0%)
 Frame = +1

Query  412  VEYEKNMKAYNKRQAEGPKADDE  480
            VEYEKNMKAYNK+  EGPK D+E
Sbjct  94   VEYEKNMKAYNKKLEEGPKEDEE  116


>gi|123379|sp|P26585|HMGL_SOYBN  HMG1/2-like protein (SB11 protein)
 gi|18645|emb|CAA41200.1|  HMG-1 like protein gene [Glycine max]
Length=152

 Score =  135 bits (341),  Expect(2) = 3e-38
 Identities = 69/102 (67%), Positives = 83/102 (81%), Gaps = 5/102 (4%)
 Frame = +3

Query  120  MKGGKSKSDTKSA--KLSVNKKPATKGGRK---SGKAVKDPNKPKRPASAFFVFMEEFRE  284
            MKGGKSK+++K A  KL+VNKK A    RK    GKA KDPNKPKRP SAFFVFMEEFR+
Sbjct  1    MKGGKSKTESKRADPKLAVNKKGAATKARKPAGKGKAAKDPNKPKRPPSAFFVFMEEFRK  60

Query  285  QYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
             + K+HP+NK+V+AVGKA G KWK+MS+AEKAP+VAK+EK K
Sbjct  61   VFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRK  102


 Score = 42.7 bits (99),  Expect(2) = 3e-38
 Identities = 18/23 (78%), Positives = 20/23 (86%), Gaps = 0/23 (0%)
 Frame = +1

Query  412  VEYEKNMKAYNKRQAEGPKADDE  480
            VEYEKNM+AYNK+QAEGP   DE
Sbjct  103  VEYEKNMRAYNKKQAEGPTGGDE  125


>gi|436424|emb|CAA54168.1|  HMG 1 protein [Pisum sativum]
Length=154

 Score =  137 bits (344),  Expect(2) = 2e-37
 Identities = 72/103 (69%), Positives = 84/103 (81%), Gaps = 6/103 (5%)
 Frame = +3

Query  120  MKGGKSKSDTKSA--KLSVNKK--PATKGGRK--SGKAVKDPNKPKRPASAFFVFMEEFR  281
            MKGGKSK ++K A  KL+VNKK  PATKGG+K   GK  KDPNKPKRP SAFFVFME+FR
Sbjct  1    MKGGKSKGESKKAETKLAVNKKGAPATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMEDFR  60

Query  282  EQYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            +Q+KK +  NK+V+AVGKA G KWKSM+EAEKAP+ AKAEK K
Sbjct  61   KQFKKGNADNKAVSAVGKAAGAKWKSMTEAEKAPYAAKAEKRK  103


 Score = 38.5 bits (88),  Expect(2) = 2e-37
 Identities = 16/22 (72%), Positives = 20/22 (90%), Gaps = 0/22 (0%)
 Frame = +1

Query  415  EYEKNMKAYNKRQAEGPKADDE  480
            EYEK+MK+YNK+QAEGP A +E
Sbjct  105  EYEKSMKSYNKKQAEGPAAVEE  126


>gi|79318295|ref|NP_001031075.1|  HMGB3 (HIGH MOBILITY GROUP B 3) [Arabidopsis thaliana]
Length=147

 Score =  141 bits (356),  Expect(2) = 3e-36
 Identities = 70/97 (72%), Positives = 84/97 (86%), Gaps = 4/97 (4%)
 Frame = +3

Query  120  MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  299
            MKG KSK++T+S KLSV KKPA KG +    A KDPNKPKRP+SAFFVFME+FR  YK++
Sbjct  1    MKGAKSKAETRSTKLSVTKKPA-KGAKG---AAKDPNKPKRPSSAFFVFMEDFRVTYKEE  56

Query  300  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            HPKNKSVAAVGKAGG+KWKS+S++EKAP+VAKA+K K
Sbjct  57   HPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRK  93


 Score = 30.0 bits (66),  Expect(2) = 3e-36
 Identities = 12/13 (92%), Positives = 13/13 (100%), Gaps = 0/13 (0%)
 Frame = +1

Query  412  VEYEKNMKAYNKR  450
            VEYEKNMKAYNK+
Sbjct  94   VEYEKNMKAYNKK  106


>gi|63020536|gb|AAY26151.1|  high mobility group protein [Cucumis sativus]
Length=146

 Score =  141 bits (356),  Expect(2) = 3e-36
 Identities = 70/97 (72%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
 Frame = +3

Query  120  MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  299
            MKGGKSK   K     +  K A    +KS KA KDPNKPKRPASAFFVFMEEFR+QYKK+
Sbjct  1    MKGGKSKGAPKKTDTKLKSKSAG-ASKKSAKAAKDPNKPKRPASAFFVFMEEFRKQYKKE  59

Query  300  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            HP NKSVAAVGKAGGDKWKSMS+AEKAP++ KAEK K
Sbjct  60   HPNNKSVAAVGKAGGDKWKSMSDAEKAPYINKAEKRK  96


 Score = 30.0 bits (66),  Expect(2) = 3e-36
 Identities = 13/22 (59%), Positives = 16/22 (72%), Gaps = 0/22 (0%)
 Frame = +1

Query  415  EYEKNMKAYNKRQAEGPKADDE  480
            EY K+M+AYNKR AEG    +E
Sbjct  98   EYNKSMQAYNKRIAEGGNGAEE  119


>gi|729736|sp|P40619|HMGL_IPONI  HMG1/2-like protein
Length=144

 Score =  129 bits (325),  Expect(2) = 1e-33
 Identities = 65/97 (67%), Positives = 79/97 (81%), Gaps = 3/97 (3%)
 Frame = +3

Query  120  MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  299
            MKGGKSK+ + + KL+V K+ A    +K+ KAVKDPNKPKRP SAFFVFME+FR+ YK+ 
Sbjct  1    MKGGKSKAKSDN-KLAVKKQAADT--KKTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEK  57

Query  300  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            HP NKSVA VGKAGGDKWK ++ AEKAPF++KAEK K
Sbjct  58   HPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRK  94


 Score = 33.5 bits (75),  Expect(2) = 1e-33
 Identities = 13/22 (59%), Positives = 18/22 (81%), Gaps = 0/22 (0%)
 Frame = +1

Query  415  EYEKNMKAYNKRQAEGPKADDE  480
            EYEKN++AYNK+QA G   ++E
Sbjct  96   EYEKNLQAYNKKQAAGAAEEEE  117


>gi|1052956|gb|AAC50019.1|  high mobility group protein 2 HMG2 [Ipomoea nil]
Length=146

 Score =  132 bits (331),  Expect(2) = 1e-33
 Identities = 66/97 (68%), Positives = 80/97 (82%), Gaps = 3/97 (3%)
 Frame = +3

Query  120  MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  299
            MKGGKSK+ + + KL+V K+      +KS K+VKDPNKPKRP SAFFVFME+FR+ YK+ 
Sbjct  1    MKGGKSKAKSDN-KLAVKKRGCET--KKSKKSVKDPNKPKRPPSAFFVFMEDFRKTYKEK  57

Query  300  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            HP NKSVAAVGKAGGDKWK +++AEKAPF+AKAEK K
Sbjct  58   HPNNKSVAAVGKAGGDKWKQLTDAEKAPFIAKAEKRK  94


 Score = 30.8 bits (68),  Expect(2) = 1e-33
 Identities = 14/22 (63%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
 Frame = +1

Query  415  EYEKNMKAYNKRQAEGPKADDE  480
            EYEK+M+AYN++QA G  AD+E
Sbjct  96   EYEKSMQAYNRKQA-GEAADEE  116


>gi|729737|sp|P40620|HMGL_VICFA  HMG1/2-like protein
Length=149

 Score =  138 bits (348),  Expect(2) = 3e-33
 Identities = 76/111 (68%), Positives = 87/111 (78%), Gaps = 10/111 (9%)
 Frame = +3

Query  120  MKGGKSKSDTKSA--KLSVNKK--PATKGGRK--SGKAVKDPNKPKRPASAFFVFMEEFR  281
            MKGGKSK ++K A  KL+VNKK   ATKGG+K   GK  KDPNKPKRP SAFFVFM +FR
Sbjct  1    MKGGKSKGESKKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFR  60

Query  282  EQYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAKGGV*EEHE  434
            EQYKKDHP NKSVAAVGKA G++WKS+SE EKAP+V +A K K    EE+E
Sbjct  61   EQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKK----EEYE  107


 Score = 23.1 bits (48),  Expect(2) = 3e-33
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
 Frame = +1

Query  415  EYEKNMKAYNKRQAEGPKADDERG  486
            EYE  ++AYNK+  EG   DDE G
Sbjct  105  EYEITLQAYNKK-LEG--KDDEEG  125


>gi|2196548|gb|AAB61215.1|  DNA-binding protein [Nicotiana tabacum]
Length=142

 Score =  130 bits (327),  Expect(2) = 1e-32
 Identities = 68/97 (70%), Positives = 75/97 (77%), Gaps = 3/97 (3%)
 Frame = +3

Query  120  MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  299
            MKGGKSK+   S KL V KK      +K+ KA KDPNKPKRP SAFFVFMEEFR+ YK+ 
Sbjct  1    MKGGKSKAGADS-KLGVRKKATET--KKAKKAAKDPNKPKRPPSAFFVFMEEFRKTYKEK  57

Query  300  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            HP NKSVAAVGKAGGD WK +SEAEKAP+ AKAEK K
Sbjct  58   HPNNKSVAAVGKAGGDAWKKLSEAEKAPYQAKAEKRK  94


 Score = 28.9 bits (63),  Expect(2) = 1e-32
 Identities = 11/21 (52%), Positives = 16/21 (76%), Gaps = 0/21 (0%)
 Frame = +1

Query  415  EYEKNMKAYNKRQAEGPKADD  477
            EY+KNM AYN++QA   + D+
Sbjct  96   EYQKNMDAYNRKQAGDAEEDE  116


>gi|1813329|dbj|BAA19156.1|  HMG-1 [Canavalia gladiata]
Length=141

 Score =  136 bits (343),  Expect(2) = 2e-32
 Identities = 66/93 (70%), Positives = 76/93 (81%), Gaps = 0/93 (0%)
 Frame = +3

Query  132  KSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKN  311
            K K+D K+A   + +K A  G ++S KA KDPNKPKRP SAFFVFM EFREQYKK+HP N
Sbjct  3    KVKADAKAADNRLKRKGAGAGRKQSKKAAKDPNKPKRPPSAFFVFMSEFREQYKKEHPTN  62

Query  312  KSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            KSVA VGKAGGDKWKS+S+AEKAPFVA+AEK K
Sbjct  63   KSVAVVGKAGGDKWKSLSDAEKAPFVARAEKKK  95


 Score = 21.9 bits (45),  Expect(2) = 2e-32
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +1

Query  415  EYEKNMKAYNKRQAEGPKADDE  480
            EY+K++ AYN R+ EG    +E
Sbjct  97   EYDKSILAYN-RKLEGKNPSEE  117


>gi|2894109|emb|CAA05365.1|  high mobility group protein [Solanum tuberosum]
Length=141

 Score =  123 bits (309),  Expect(2) = 3e-31
 Identities = 65/97 (67%), Positives = 75/97 (77%), Gaps = 3/97 (3%)
 Frame = +3

Query  120  MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  299
            MKG KSK+   + KL V KK AT+  +K+  A KDPNKPKRP SAFFVFMEEFR+ YK+ 
Sbjct  1    MKGAKSKAKADT-KLGVRKK-ATES-KKAKNAAKDPNKPKRPPSAFFVFMEEFRKTYKEK  57

Query  300  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            HP NKSVA VGKAGGDKWK +S+ EKAP+ AKAEK K
Sbjct  58   HPNNKSVAVVGKAGGDKWKQLSDEEKAPYQAKAEKRK  94


 Score = 31.2 bits (69),  Expect(2) = 3e-31
 Identities = 13/22 (59%), Positives = 16/22 (72%), Gaps = 0/22 (0%)
 Frame = +1

Query  415  EYEKNMKAYNKRQAEGPKADDE  480
            EY+KNM AYNK+ A G   D+E
Sbjct  96   EYQKNMDAYNKKLAAGDADDEE  117


>gi|729738|sp|P40621|HMGL_WHEAT  HMG1/2-like protein
 gi|21803|emb|CAA77641.1|  high mobility group protein [Triticum aestivum]
 gi|114145392|dbj|BAF30985.1|  high mobility globular protein [Triticum aestivum]
Length=161

 Score =  128 bits (322),  Expect = 1e-29
 Identities = 69/103 (66%), Positives = 81/103 (78%), Gaps = 7/103 (6%)
 Frame = +3

Query  120  MKGGKSKSDTKS-AKLSVN----KKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFRE  284
            MKG KSK   K+ AKL+V     +KPA KG  K GKA KDPNKPKR  SAFFVFM EFRE
Sbjct  1    MKGAKSKGAAKADAKLAVKSKGAEKPAAKG--KKGKAGKDPNKPKRAPSAFFVFMGEFRE  58

Query  285  QYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAKG  413
            ++K+ +PKNKSVAAVGKA G++WKS+SE+EKAP+VAKA K KG
Sbjct  59   EFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKG  101


>gi|950053|emb|CAA90679.1|  HMG1/2-like protein [Hordeum vulgare subsp. vulgare]
Length=160

 Score =  128 bits (321),  Expect = 2e-29
 Identities = 69/103 (66%), Positives = 80/103 (77%), Gaps = 7/103 (6%)
 Frame = +3

Query  120  MKGGKSKSDTKS-AKLSVN----KKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFRE  284
            MKG KSK   K+  KL+V     +KPA KG  K GKA KDPNKPKR  SAFFVFM EFRE
Sbjct  1    MKGAKSKGAAKADTKLAVKSKGAEKPAAKG--KKGKAGKDPNKPKRAPSAFFVFMGEFRE  58

Query  285  QYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAKG  413
            ++K+ +PKNKSVAAVGKA G++WKS+SE+EKAPFVAKA K KG
Sbjct  59   EFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPFVAKANKLKG  101


>gi|115470082|ref|NP_001058640.1|  Os06g0728000 [Oryza sativa (japonica cultivar-group)]
 gi|3885888|gb|AAC78104.1|  high mobility group protein [Oryza sativa]
 gi|23345287|gb|AAN28722.1|  HMG1 protein [Oryza sativa (indica cultivar-group)]
 gi|30267833|gb|AAP21609.1|  HMGB1 [Oryza sativa (indica cultivar-group)]
 gi|54291150|dbj|BAD61823.1|  HMGB1 [Oryza sativa (japonica cultivar-group)]
 gi|113596680|dbj|BAF20554.1|  Os06g0728000 [Oryza sativa (japonica cultivar-group)]
Length=157

 Score =  126 bits (316),  Expect(2) = 3e-29
 Identities = 67/102 (65%), Positives = 80/102 (78%), Gaps = 7/102 (6%)
 Frame = +3

Query  120  MKGGKSKSDTK-SAKLSVN----KKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFRE  284
            MKG KSK   K  AKL+V     +KPA KG  + GKA KDPNKPKR  SAFFVFMEEFR+
Sbjct  1    MKGAKSKGAAKPDAKLAVKSKGAEKPAAKG--RKGKAGKDPNKPKRAPSAFFVFMEEFRK  58

Query  285  QYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            ++K+ +PKNKSVAAVGKA GD+WKS++EA+KAP+VAKA K K
Sbjct  59   EFKEKNPKNKSVAAVGKAAGDRWKSLTEADKAPYVAKANKLK  100


 Score = 21.9 bits (45),  Expect(2) = 3e-29
 Identities = 9/19 (47%), Positives = 12/19 (63%), Gaps = 0/19 (0%)
 Frame = +1

Query  415  EYEKNMKAYNKRQAEGPKA  471
            EY K + AYNK ++   KA
Sbjct  102  EYNKAIAAYNKGESTAKKA  120


>gi|18419623|gb|AAL69379.1|AF462216_1  HMG-domain containing protein [Narcissus pseudonarcissus]
Length=106

 Score =  126 bits (316),  Expect = 6e-29
 Identities = 66/104 (63%), Positives = 76/104 (73%), Gaps = 7/104 (6%)
 Frame = +3

Query  120  MKGGKSKSDTKS---AKLSVNKKPATKGGRK----SGKAVKDPNKPKRPASAFFVFMEEF  278
            MKGGKSK+DT     A+LSV +K A K  +K      KA KDPNKPKRP SAFFVFMEEF
Sbjct  1    MKGGKSKADTSKKADARLSVKRKAAEKPAKKPVVKKSKAEKDPNKPKRPPSAFFVFMEEF  60

Query  279  REQYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            R+Q+K+ +P NK V+ VGKA GDKWKSMS  EKAP+ AKA K K
Sbjct  61   RKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKAAKRK  104


>gi|123378|sp|P27347|MNB1B_MAIZE  DNA-binding protein MNB1B (HMG1-like protein)
 gi|22329|emb|CAA41220.1|  high mobility group protein [Zea mays]
 gi|5441502|emb|CAB46752.1|  HMGa protein [Zea mays]
 gi|22347617|gb|AAM95942.1|  nucleosome/chromatin assembly factor group D protein [Zea mays]
Length=157

 Score =  126 bits (316),  Expect = 6e-29
 Identities = 65/99 (65%), Positives = 79/99 (79%), Gaps = 2/99 (2%)
 Frame = +3

Query  120  MKGGKSKSDTKS-AKLSVNKKPATKGGR-KSGKAVKDPNKPKRPASAFFVFMEEFREQYK  293
            MKG KSK   K+ AKL+V  K A K  + + GKA KDPNKPKR  SAFFVFMEEFR+++K
Sbjct  1    MKGAKSKGAAKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFK  60

Query  294  KDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            + +PKNKSVAAVGKA GD+WKS+SE++KAP+VAKA K K
Sbjct  61   EKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLK  99


>gi|7446229|pir||T03640  high mobility group protein MNB1b - maize (fragment)
 gi|397396|emb|CAA46876.1|  DNA-binding protein [Zea mays]
Length=168

 Score =  126 bits (316),  Expect = 6e-29
 Identities = 65/99 (65%), Positives = 79/99 (79%), Gaps = 2/99 (2%)
 Frame = +3

Query  120  MKGGKSKSDTKS-AKLSVNKKPATKGGR-KSGKAVKDPNKPKRPASAFFVFMEEFREQYK  293
            MKG KSK   K+ AKL+V  K A K  + + GKA KDPNKPKR  SAFFVFMEEFR+++K
Sbjct  12   MKGAKSKGAAKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFK  71

Query  294  KDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            + +PKNKSVAAVGKA GD+WKS+SE++KAP+VAKA K K
Sbjct  72   EKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLK  110


>gi|106879575|emb|CAJ38371.1|  HMG-protein [Plantago major]
Length=212

 Score =  112 bits (280),  Expect(2) = 1e-26
 Identities = 63/112 (56%), Positives = 78/112 (69%), Gaps = 11/112 (9%)
 Frame = +3

Query  105  QPGFDMKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFRE  284
            +P  D K GK K+    A     KKPA K   K  KA KDPNKPKRP SAFFVF+EEFR+
Sbjct  63   KPVDDRKVGKRKA----AAAPKVKKPAAK---KDKKAKKDPNKPKRPPSAFFVFLEEFRQ  115

Query  285  QYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAKGGV*EEHESL  440
             +KK++P  K+V+AVGKAGG+KWKS+++AEKAP+ AKA K K     E+E L
Sbjct  116  TFKKENPNIKAVSAVGKAGGEKWKSLTDAEKAPYEAKAAKRK----SEYEKL  163


 Score = 26.9 bits (58),  Expect(2) = 1e-26
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 0/22 (0%)
 Frame = +1

Query  415  EYEKNMKAYNKRQAEGPKADDE  480
            EYEK M AYNK+Q       DE
Sbjct  159  EYEKLMNAYNKKQESSADEADE  180


>gi|47027098|gb|AAT08762.1|  HMG transcription factor [Hyacinthus orientalis]
Length=158

 Score =  113 bits (283),  Expect(2) = 1e-26
 Identities = 61/101 (60%), Positives = 73/101 (72%), Gaps = 8/101 (7%)
 Frame = +3

Query  132  KSKSDTKS---AKLSVNKKPATKGGRK-----SGKAVKDPNKPKRPASAFFVFMEEFREQ  287
            KSK+DT +   AKLSV +K A K  +K       KAVKDPNKPKRP SAFFVFME+FR+Q
Sbjct  1    KSKADTSNKADAKLSVKRKAAEKPAKKPAPAKKSKAVKDPNKPKRPPSAFFVFMEDFRKQ  60

Query  288  YKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            +K+ +P NK V+ VGKA   KWK+MS AEKAPF A+A K K
Sbjct  61   FKEKNPNNKQVSVVGKACWGKWKTMSAAEKAPFEARAAKRK  101


 Score = 25.8 bits (55),  Expect(2) = 1e-26
 Identities = 10/16 (62%), Positives = 13/16 (81%), Gaps = 0/16 (0%)
 Frame = +1

Query  415  EYEKNMKAYNKRQAEG  462
            +Y K M AYNK+Q+EG
Sbjct  103  DYNKVMVAYNKKQSEG  118


 Score = 30.4 bits (67),  Expect = 4.3
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 0/47 (0%)
 Frame = +3

Query  99   AHQPGFDMKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPK  239
            A +  F+ +  K K+D     ++ NKK +  GG+KS +   D    K
Sbjct  88   AEKAPFEARAAKRKADYNKVMVAYNKKQSEGGGKKSAEEEDDEESDK  134


>gi|115480551|ref|NP_001063869.1|  Os09g0551600 [Oryza sativa (japonica cultivar-group)]
 gi|50726318|dbj|BAD33893.1|  putative HMGd1 [Oryza sativa (japonica cultivar-group)]
 gi|113632102|dbj|BAF25783.1|  Os09g0551600 [Oryza sativa (japonica cultivar-group)]
Length=127

 Score =  112 bits (279),  Expect(2) = 4e-26
 Identities = 55/93 (59%), Positives = 67/93 (72%), Gaps = 10/93 (10%)
 Frame = +3

Query  132  KSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKN  311
            +S+S    ++LSV K           KA KDPNKPKRP SAFFVFME+FR+ YK+ HP  
Sbjct  4    RSRSSNGDSRLSVRKT----------KAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNV  53

Query  312  KSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            K V+ +GKAGGDKWKSM++A+KAPFV KAEK K
Sbjct  54   KQVSVIGKAGGDKWKSMTDADKAPFVTKAEKLK  86


 Score = 25.8 bits (55),  Expect(2) = 4e-26
 Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 0/17 (0%)
 Frame = +1

Query  415  EYEKNMKAYNKRQAEGP  465
            EY K + AYN +QA GP
Sbjct  88   EYTKKIDAYNNKQAGGP  104


>gi|22135473|gb|AAM93217.1|AF527616_1  nucleasome/chromatin assembly factor D protein NFD101 [Zea mays]
 gi|2196672|emb|CAA70045.1|  HMGd1 [Zea mays]
Length=126

 Score =  112 bits (279),  Expect(2) = 2e-25
 Identities = 55/93 (59%), Positives = 68/93 (73%), Gaps = 10/93 (10%)
 Frame = +3

Query  132  KSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKN  311
            +++S    ++LSV K           KA KDPNKPKRP SAFFVFMEEFR+ YK+ HP  
Sbjct  4    RARSTAGDSRLSVRKT----------KAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNV  53

Query  312  KSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            K V+ +GKAGGDKWKS+S+AEKAP+V+KAEK K
Sbjct  54   KQVSVIGKAGGDKWKSLSDAEKAPYVSKAEKLK  86


 Score = 23.5 bits (49),  Expect(2) = 2e-25
 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 0/22 (0%)
 Frame = +1

Query  415  EYEKNMKAYNKRQAEGPKADDE  480
            EY K + AYN +Q+  P A  +
Sbjct  88   EYTKKIDAYNNKQSGDPTASGD  109


>gi|17017392|gb|AAL33650.1|AF440221_1  HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length=126

 Score =  111 bits (278),  Expect(2) = 2e-25
 Identities = 55/93 (59%), Positives = 68/93 (73%), Gaps = 10/93 (10%)
 Frame = +3

Query  132  KSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKN  311
            +++S    ++LSV K           KA KDPNKPKRP SAFFVFMEEFR+ YK+ HP  
Sbjct  4    RARSTAGDSRLSVRKT----------KAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNV  53

Query  312  KSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            K V+ +GKAGGDKWKS+S+AEKAP+V+KAEK K
Sbjct  54   KQVSLIGKAGGDKWKSLSDAEKAPYVSKAEKLK  86


 Score = 23.5 bits (49),  Expect(2) = 2e-25
 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 0/22 (0%)
 Frame = +1

Query  415  EYEKNMKAYNKRQAEGPKADDE  480
            EY K + AYN +Q+  P A  +
Sbjct  88   EYTKKIDAYNNKQSGDPTASGD  109


>gi|42572635|ref|NP_974413.1|  HMGB1 (HIGH MOBILITY GROUP B 1) [Arabidopsis thaliana]
Length=185

 Score =  107 bits (266),  Expect(2) = 9e-25
 Identities = 57/104 (54%), Positives = 70/104 (67%), Gaps = 8/104 (7%)
 Frame = +3

Query  99   AHQPGFDMKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEF  278
            A +P  D K GK K+  +        KP  +  RK  KA KDPNKPKR  SAFFVF+E+F
Sbjct  16   ALKPVDDRKVGKRKAPAE--------KPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDF  67

Query  279  REQYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            R  +KK++P  K+V+AVGKAGG KWKSMS+AEKAP+  KA K K
Sbjct  68   RVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRK  111


 Score = 26.2 bits (56),  Expect(2) = 9e-25
 Identities = 11/16 (68%), Positives = 11/16 (68%), Gaps = 0/16 (0%)
 Frame = +1

Query  415  EYEKNMKAYNKRQAEG  462
            EYEK M AYNK   EG
Sbjct  113  EYEKQMDAYNKNLEEG  128


>gi|15231065|ref|NP_190756.1|  HMGB1 (HIGH MOBILITY GROUP B 1); transcription factor [Arabidopsis 
thaliana]
 gi|2832357|emb|CAA74400.1|  HMG protein [Arabidopsis thaliana]
 gi|3068715|gb|AAC14415.1|  unknown [Arabidopsis thaliana]
 gi|15912191|gb|AAL08229.1|  At3g51880/ORF13 [Arabidopsis thaliana]
 gi|21360557|gb|AAM47475.1|  At3g51880/ORF13 [Arabidopsis thaliana]
Length=178

 Score =  107 bits (266),  Expect(2) = 9e-25
 Identities = 57/104 (54%), Positives = 70/104 (67%), Gaps = 8/104 (7%)
 Frame = +3

Query  99   AHQPGFDMKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEF  278
            A +P  D K GK K+  +        KP  +  RK  KA KDPNKPKR  SAFFVF+E+F
Sbjct  16   ALKPVDDRKVGKRKAPAE--------KPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDF  67

Query  279  REQYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            R  +KK++P  K+V+AVGKAGG KWKSMS+AEKAP+  KA K K
Sbjct  68   RVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRK  111


 Score = 26.2 bits (56),  Expect(2) = 9e-25
 Identities = 11/16 (68%), Positives = 11/16 (68%), Gaps = 0/16 (0%)
 Frame = +1

Query  415  EYEKNMKAYNKRQAEG  462
            EYEK M AYNK   EG
Sbjct  113  EYEKQMDAYNKNLEEG  128


>gi|21592453|gb|AAM64404.1|  putative HMG protein [Arabidopsis thaliana]
Length=138

 Score =  107 bits (268),  Expect(2) = 7e-24
 Identities = 51/97 (52%), Positives = 71/97 (73%), Gaps = 4/97 (4%)
 Frame = +3

Query  120  MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  299
            MKGG+SK++  S     +++  T+G +   K  KDPN+PKRP SAFFVF+E+FR+++   
Sbjct  1    MKGGESKAEATST----DQRLKTRGRKAGNKTKKDPNQPKRPPSAFFVFLEDFRKEFNLA  56

Query  300  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            +P NKSVA VGKA G +WKSM++ +KAP+VAKAE  K
Sbjct  57   NPNNKSVATVGKAAGARWKSMTDEDKAPYVAKAESRK  93


 Score = 22.3 bits (46),  Expect(2) = 7e-24
 Identities = 8/22 (36%), Positives = 14/22 (63%), Gaps = 0/22 (0%)
 Frame = +1

Query  415  EYEKNMKAYNKRQAEGPKADDE  480
            EY KN++ YN + A G   +++
Sbjct  95   EYIKNVQQYNLKLASGTNREED  116


>gi|4468042|emb|CAB37859.1|  unnamed protein product [Vicia faba var. minor]
Length=74

 Score =  108 bits (269),  Expect = 2e-23
 Identities = 53/72 (73%), Positives = 60/72 (83%), Gaps = 4/72 (5%)
 Frame = +3

Query  219  KDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKA  398
            KDPNKPKRP SAFFVFM +FREQYKKDHP NKSVAAVGKA G++WKS+SE EKAP+V +A
Sbjct  1    KDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRA  60

Query  399  EKAKGGV*EEHE  434
             K K    EE+E
Sbjct  61   LKKK----EEYE  68


>gi|13877775|gb|AAK43965.1|AF370150_1  putative HMG protein [Arabidopsis thaliana]
Length=138

 Score =  105 bits (263),  Expect(2) = 3e-23
 Identities = 50/97 (51%), Positives = 71/97 (73%), Gaps = 4/97 (4%)
 Frame = +3

Query  120  MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  299
            MKGG+SK++  S     +++  T+G +   K  KDPN+PKRP SAFFVF+E+FR+++   
Sbjct  1    MKGGESKAEATST----DQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLA  56

Query  300  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            +P NKSVA VGKA G +WK+M++ +KAP+VAKAE  K
Sbjct  57   NPNNKSVATVGKAAGARWKAMTDEDKAPYVAKAESIK  93


 Score = 22.3 bits (46),  Expect(2) = 3e-23
 Identities = 8/22 (36%), Positives = 14/22 (63%), Gaps = 0/22 (0%)
 Frame = +1

Query  415  EYEKNMKAYNKRQAEGPKADDE  480
            EY KN++ YN + A G   +++
Sbjct  95   EYIKNVQQYNLKLASGTNREED  116


>gi|2832355|emb|CAA74403.1|  HMG protein [Arabidopsis thaliana]
Length=138

 Score =  105 bits (263),  Expect(2) = 3e-23
 Identities = 51/97 (52%), Positives = 70/97 (72%), Gaps = 4/97 (4%)
 Frame = +3

Query  120  MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  299
            MKGG+SK+   S     +++  T+G +   K  KDPN+PKRP SAFFVF+E+FR+++   
Sbjct  1    MKGGESKAGATST----DQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLA  56

Query  300  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            +P NKSVA VGKA G +WKSM++ +KAP+VAKAE  K
Sbjct  57   NPNNKSVATVGKAAGARWKSMTDEDKAPYVAKAESRK  93


 Score = 22.3 bits (46),  Expect(2) = 3e-23
 Identities = 8/22 (36%), Positives = 14/22 (63%), Gaps = 0/22 (0%)
 Frame = +1

Query  415  EYEKNMKAYNKRQAEGPKADDE  480
            EY KN++ YN + A G   +++
Sbjct  95   EYIKNVQQYNLKLASGTNREED  116


>gi|15227862|ref|NP_179347.1|  HMGB4 (HIGH MOBILITY GROUP B 4); transcription factor [Arabidopsis 
thaliana]
 gi|25385737|pir||F84553  probable HMG protein [imported] - Arabidopsis thaliana
 gi|13926177|gb|AAK49570.1|AF370562_1  putative HMG protein [Arabidopsis thaliana]
 gi|4914377|gb|AAD32913.1|  putative HMG protein [Arabidopsis thaliana]
 gi|23297615|gb|AAN12992.1|  putative HMG protein [Arabidopsis thaliana]
Length=138

 Score =  105 bits (263),  Expect(2) = 3e-23
 Identities = 50/97 (51%), Positives = 71/97 (73%), Gaps = 4/97 (4%)
 Frame = +3

Query  120  MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  299
            MKGG+SK++  S     +++  T+G +   K  KDPN+PKRP SAFFVF+E+FR+++   
Sbjct  1    MKGGESKAEATST----DQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLA  56

Query  300  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            +P NKSVA VGKA G +WK+M++ +KAP+VAKAE  K
Sbjct  57   NPNNKSVATVGKAAGARWKAMTDEDKAPYVAKAESRK  93


 Score = 22.3 bits (46),  Expect(2) = 3e-23
 Identities = 8/22 (36%), Positives = 14/22 (63%), Gaps = 0/22 (0%)
 Frame = +1

Query  415  EYEKNMKAYNKRQAEGPKADDE  480
            EY KN++ YN + A G   +++
Sbjct  95   EYIKNVQQYNLKLASGTNREED  116


>gi|79322411|ref|NP_001031364.1|  HMGB4 (HIGH MOBILITY GROUP B 4) [Arabidopsis thaliana]
Length=134

 Score =  105 bits (263),  Expect(2) = 3e-23
 Identities = 50/97 (51%), Positives = 71/97 (73%), Gaps = 4/97 (4%)
 Frame = +3

Query  120  MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  299
            MKGG+SK++  S     +++  T+G +   K  KDPN+PKRP SAFFVF+E+FR+++   
Sbjct  1    MKGGESKAEATST----DQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLA  56

Query  300  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            +P NKSVA VGKA G +WK+M++ +KAP+VAKAE  K
Sbjct  57   NPNNKSVATVGKAAGARWKAMTDEDKAPYVAKAESRK  93


 Score = 22.3 bits (46),  Expect(2) = 3e-23
 Identities = 8/22 (36%), Positives = 14/22 (63%), Gaps = 0/22 (0%)
 Frame = +1

Query  415  EYEKNMKAYNKRQAEGPKADDE  480
            EY KN++ YN + A G   +++
Sbjct  95   EYIKNVQQYNLKLASGTNREED  116


>gi|15237040|ref|NP_195282.1|  HMGB5 (HIGH MOBILITY GROUP B 5); transcription factor [Arabidopsis 
thaliana]
 gi|2832363|emb|CAA74404.1|  HMG protein [Arabidopsis thaliana]
 gi|3367575|emb|CAA20027.1|  HMG delta protein [Arabidopsis thaliana]
 gi|7270508|emb|CAB80273.1|  HMG delta protein [Arabidopsis thaliana]
 gi|21553743|gb|AAM62836.1|  HMG delta protein [Arabidopsis thaliana]
 gi|98961063|gb|ABF59015.1|  At4g35570 [Arabidopsis thaliana]
Length=125

 Score = 93.2 bits (230),  Expect = 5e-19
 Identities = 40/72 (55%), Positives = 55/72 (76%), Gaps = 0/72 (0%)
 Frame = +3

Query  195  GRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKWKSMSEAE  374
            G K GK  KDPN+PK+P S FFVF+++FR+++   +P NKSV  VG+A G KWK+M+E E
Sbjct  21   GNKVGKKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRAAGKKWKTMTEEE  80

Query  375  KAPFVAKAEKAK  410
            +APFVAK++  K
Sbjct  81   RAPFVAKSQSKK  92


>gi|115447831|ref|NP_001047695.1|  Os02g0670400 [Oryza sativa (japonica cultivar-group)]
 gi|50251344|dbj|BAD28320.1|  putative high mobility group protein [Oryza sativa (japonica 
cultivar-group)]
 gi|50252158|dbj|BAD28154.1|  putative high mobility group protein [Oryza sativa (japonica 
cultivar-group)]
 gi|113537226|dbj|BAF09609.1|  Os02g0670400 [Oryza sativa (japonica cultivar-group)]
Length=145

 Score = 93.2 bits (230),  Expect = 5e-19
 Identities = 50/93 (53%), Positives = 62/93 (66%), Gaps = 3/93 (3%)
 Frame = +3

Query  132  KSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKN  311
            K K+D  ++K    +  A  G  K  KA     KPKRP SAFFVFM EFR++Y+  HP N
Sbjct  2    KGKAD--ASKKGEGRLKAAGGAGKRKKAAAS-GKPKRPPSAFFVFMSEFRQEYQAAHPDN  58

Query  312  KSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            KSVAAV KA G+KW++MSE EKAP+V KA + K
Sbjct  59   KSVAAVSKAAGEKWRAMSEQEKAPYVDKAGQKK  91


>gi|1845197|emb|CAA69606.1|  HMGc2 [Zea mays]
Length=138

 Score = 92.8 bits (229),  Expect = 7e-19
 Identities = 50/97 (51%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
 Frame = +3

Query  120  MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  299
            MKG  + S    A+L      A  GG    K      KPKRP SAFFVFM EFR++Y+  
Sbjct  1    MKGKANASKKDEARLR-----AGGGGAGKRKKAAASGKPKRPPSAFFVFMSEFRQEYQAQ  55

Query  300  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            HP NKSVAAV KA G+KW+SMSE EK P+V +A + K
Sbjct  56   HPGNKSVAAVSKAAGEKWRSMSEQEKQPYVDQAGQKK  92


>gi|18700443|dbj|BAB85204.1|  high mobility group box protein 2 [Oryza sativa (japonica cultivar-group)]
Length=145

 Score = 92.8 bits (229),  Expect = 7e-19
 Identities = 50/93 (53%), Positives = 62/93 (66%), Gaps = 3/93 (3%)
 Frame = +3

Query  132  KSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKN  311
            K K+D  ++K    +  A  G  K  KA     KPKRP SAFFVFM EFR++Y+  HP N
Sbjct  2    KGKAD--ASKKGEGRLKAAGGAGKRKKAAAS-GKPKRPPSAFFVFMSEFRQEYQAAHPGN  58

Query  312  KSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            KSVAAV KA G+KW++MSE EKAP+V KA + K
Sbjct  59   KSVAAVSKAAGEKWRAMSEQEKAPYVDKAGQKK  91


>gi|115474323|ref|NP_001060758.1|  Os08g0101100 [Oryza sativa (japonica cultivar-group)]
 gi|38637289|dbj|BAD03552.1|  putative HMG type nucleosome/chromatin assembly factor D [Oryza 
sativa (japonica cultivar-group)]
 gi|113622727|dbj|BAF22672.1|  Os08g0101100 [Oryza sativa (japonica cultivar-group)]
Length=203

 Score = 87.4 bits (215),  Expect = 3e-17
 Identities = 39/87 (44%), Positives = 62/87 (71%), Gaps = 3/87 (3%)
 Frame = +3

Query  150  KSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAV  329
            ++ +++ +KK + K    +G+  K   K KRP +AFF+FM +FR++YK +HP NKSV+AV
Sbjct  67   QAVEVAASKKKSGKNNNNNGEGAK---KGKRPPTAFFLFMSDFRKEYKAEHPDNKSVSAV  123

Query  330  GKAGGDKWKSMSEAEKAPFVAKAEKAK  410
             K GG++WKSMS+ +K P++ KA + K
Sbjct  124  AKEGGERWKSMSDEDKKPYLDKAAELK  150


>gi|1845195|emb|CAA69605.1|  HMGc1 [Zea mays]
 gi|5441504|emb|CAB46753.1|  HMGc1 protein [Zea mays]
Length=139

 Score = 86.3 bits (212),  Expect = 7e-17
 Identities = 45/93 (48%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
 Frame = +3

Query  132  KSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKN  311
            K K+DT        +     G RK   A     KPKRP SAFFVFM EFR++Y+  HP N
Sbjct  2    KGKADTSKKDEGRLRAGGAAGKRKKAAA---SGKPKRPPSAFFVFMSEFRQEYQALHPGN  58

Query  312  KSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            KSVA V KA G+KW++MS+ EK P+V +A + K
Sbjct  59   KSVATVSKAAGEKWRAMSDQEKQPYVDQAGQKK  91


>gi|17017394|gb|AAL33651.1|AF440222_1  HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length=139

 Score = 84.7 bits (208),  Expect = 2e-16
 Identities = 44/93 (47%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
 Frame = +3

Query  132  KSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKN  311
            K K+DT        +     G RK   A     KPKRP SAFF FM EFR++Y+  HP N
Sbjct  2    KGKADTSKKDEGRLRAGGAAGKRKKAAA---SGKPKRPPSAFFAFMSEFRQEYQALHPGN  58

Query  312  KSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKAK  410
            KSVA V KA G+KW++MS+ EK P+V +A + K
Sbjct  59   KSVATVSKAAGEKWRAMSDQEKQPYVDQAGQKK  91


>gi|17017396|gb|AAL33652.1|AF440223_1  HMG type nucleosome/chromatin assembly factor D [Zea mays]
 gi|22135475|gb|AAM93218.1|AF527617_1  nucleasome/chromatin assembly factor D protein NFD106 [Zea mays]
Length=154

 Score = 79.0 bits (193),  Expect = 1e-14
 Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 6/79 (7%)
 Frame = +3

Query  174  KKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKW  353
            KK + KGG       KD  K KR  +AFF+FM++FR+++K  HP NKSVA V K GG++W
Sbjct  20   KKSSAKGGGN-----KDA-KRKRSPTAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERW  73

Query  354  KSMSEAEKAPFVAKAEKAK  410
            KSM++ EK P++ KA + K
Sbjct  74   KSMTDEEKKPYIEKAAELK  92


>gi|66840992|emb|CAI64395.1|  putative high mobility group protein [Triticum aestivum]
Length=112

 Score = 71.2 bits (173),  Expect = 2e-12
 Identities = 37/79 (46%), Positives = 46/79 (58%), Gaps = 0/79 (0%)
 Frame = +3

Query  171  NKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDK  350
            N   A K   K+  A     KPKR  + FF F+ EFR QY + HP+ K VAAV KA G+K
Sbjct  2    NGDTAFKASGKNKTATGGVAKPKRAPTPFFAFLAEFRPQYMEKHPEAKGVAAVTKAAGEK  61

Query  351  WKSMSEAEKAPFVAKAEKA  407
            W+SMS+ EKA +  K   A
Sbjct  62   WRSMSDEEKAKYGGKKADA  80


>gi|115445389|ref|NP_001046474.1|  Os02g0258200 [Oryza sativa (japonica cultivar-group)]
 gi|113536005|dbj|BAF08388.1|  Os02g0258200 [Oryza sativa (japonica cultivar-group)]
Length=269

 Score = 70.9 bits (172),  Expect = 3e-12
 Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 5/80 (6%)
 Frame = +3

Query  171  NKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDK  350
            NKK + KG +K  K  KDP+KPK+P SA+FV+ ++ R     +    K+V  +G+  G++
Sbjct  31   NKKASKKGKKK--KKEKDPSKPKQPMSAYFVYTQQRRAALVAE---KKNVPEIGRITGEE  85

Query  351  WKSMSEAEKAPFVAKAEKAK  410
            WK+MSEAEKAPF A A K +
Sbjct  86   WKAMSEAEKAPFEAAARKQR  105


 Score = 52.8 bits (125),  Expect = 8e-07
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
 Frame = +3

Query  132  KSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKN  311
            K K+D    K    ++    GG     A  DPN+PK+PAS+F +F +E R Q  ++ P  
Sbjct  148  KEKTDNIIKKTKEEQRKKKVGG---AAAAADPNRPKKPASSFLLFSKEARRQLAEERPGV  204

Query  312  KSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKA  407
             S + +      KWK + EAEK  +  KA +A
Sbjct  205  AS-STLTALVSVKWKELGEAEKQAWNGKAAEA  235


>gi|47497872|dbj|BAD20056.1|  putative embryogenic callus protein 98b [Oryza sativa (japonica 
cultivar-group)]
 gi|50252043|dbj|BAD27975.1|  putative embryogenic callus protein 98b [Oryza sativa (japonica 
cultivar-group)]
Length=504

 Score = 70.9 bits (172),  Expect = 3e-12
 Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 5/80 (6%)
 Frame = +3

Query  171  NKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDK  350
            NKK + KG +K  K  KDP+KPK+P SA+FV+ ++ R     +    K+V  +G+  G++
Sbjct  266  NKKASKKGKKK--KKEKDPSKPKQPMSAYFVYTQQRRAALVAE---KKNVPEIGRITGEE  320

Query  351  WKSMSEAEKAPFVAKAEKAK  410
            WK+MSEAEKAPF A A K +
Sbjct  321  WKAMSEAEKAPFEAAARKQR  340


 Score = 52.8 bits (125),  Expect = 8e-07
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
 Frame = +3

Query  132  KSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKN  311
            K K+D    K    ++    GG     A  DPN+PK+PAS+F +F +E R Q  ++ P  
Sbjct  383  KEKTDNIIKKTKEEQRKKKVGG---AAAAADPNRPKKPASSFLLFSKEARRQLAEERPGV  439

Query  312  KSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKA  407
             S + +      KWK + EAEK  +  KA +A
Sbjct  440  AS-STLTALVSVKWKELGEAEKQAWNGKAAEA  470


>gi|115439039|ref|NP_001043799.1|  Os01g0666200 [Oryza sativa (japonica cultivar-group)]
 gi|113533330|dbj|BAF05713.1|  Os01g0666200 [Oryza sativa (japonica cultivar-group)]
Length=149

 Score = 69.7 bits (169),  Expect = 6e-12
 Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 0/70 (0%)
 Frame = +3

Query  177  KPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKWK  356
            +P     RK G+ + D  +PK+P +AFF FME+FR+ YK+++P  KS+  VGKA G+KW 
Sbjct  46   QPQPPPSRKKGQPLVDRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWN  105

Query  357  SMSEAEKAPF  386
            +M+  E+  +
Sbjct  106  TMTFEERVKY  115


>gi|56202161|dbj|BAD73639.1|  HMG protein-like [Oryza sativa (japonica cultivar-group)]
Length=133

 Score = 69.7 bits (169),  Expect = 6e-12
 Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 0/70 (0%)
 Frame = +3

Query  177  KPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKWK  356
            +P     RK G+ + D  +PK+P +AFF FME+FR+ YK+++P  KS+  VGKA G+KW 
Sbjct  30   QPQPPPSRKKGQPLVDRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWN  89

Query  357  SMSEAEKAPF  386
            +M+  E+  +
Sbjct  90   TMTFEERVKY  99


>gi|115459940|ref|NP_001053570.1|  Os04g0564600 [Oryza sativa (japonica cultivar-group)]
 gi|38345400|emb|CAE03091.2|  OSJNBa0017B10.6 [Oryza sativa (japonica cultivar-group)]
 gi|113565141|dbj|BAF15484.1|  Os04g0564600 [Oryza sativa (japonica cultivar-group)]
 gi|116309704|emb|CAH66751.1|  H0409D10.9 [Oryza sativa (indica cultivar-group)]
 gi|116309707|emb|CAH66753.1|  OSIGBa0158F05.2 [Oryza sativa (indica cultivar-group)]
Length=132

 Score = 67.4 bits (163),  Expect = 3e-11
 Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
 Frame = +3

Query  198  RKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKWKSMSEAEK  377
            +K+G A     KPKR  + FF F+ EFR QY + HP  K VAAV KA G+KW++MS+ EK
Sbjct  17   KKAGGA----GKPKRGLTPFFAFLAEFRPQYMEKHPNTKGVAAVTKAAGEKWRAMSDEEK  72

Query  378  APFVAK  395
            A +  K
Sbjct  73   AQYGGK  78


>gi|18420676|ref|NP_568431.1|  HMGB6; transcription factor [Arabidopsis thaliana]
 gi|21554154|gb|AAM63233.1|  unknown [Arabidopsis thaliana]
 gi|26452394|dbj|BAC43282.1|  unknown protein [Arabidopsis thaliana]
Length=241

 Score = 67.4 bits (163),  Expect = 3e-11
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 15/112 (13%)
 Frame = +3

Query  138  KSDTKSAKLSVNKKPATKGGRK---------SGKAVKDPNKPKRPASAFFVFMEEFREQY  290
            ++  ++ K    KK  T  G K           K+    NKPKRP +AFF+FM +FR+ +
Sbjct  74   ETQAEAKKKPAEKKKTTSDGPKPKRLKKTNDEKKSSSTSNKPKRPLTAFFIFMSDFRKTF  133

Query  291  KKDHPKNKSVAA-VGKAGGDKWKSMSEAEKAPFVAKAEKAKGGV*EEHESLQ  443
            K +H  N S+A    K GG+KWKS++E EK  ++ KA + K    E ++SL+
Sbjct  134  KSEH--NGSLAKDAAKIGGEKWKSLTEEEKKVYLDKAAELKA---EYNKSLE  180


>gi|9759080|dbj|BAB09558.1|  unnamed protein product [Arabidopsis thaliana]
Length=226

 Score = 67.4 bits (163),  Expect = 3e-11
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 15/112 (13%)
 Frame = +3

Query  138  KSDTKSAKLSVNKKPATKGGRK---------SGKAVKDPNKPKRPASAFFVFMEEFREQY  290
            ++  ++ K    KK  T  G K           K+    NKPKRP +AFF+FM +FR+ +
Sbjct  59   ETQAEAKKKPAEKKKTTSDGPKPKRLKKTNDEKKSSSTSNKPKRPLTAFFIFMSDFRKTF  118

Query  291  KKDHPKNKSVAA-VGKAGGDKWKSMSEAEKAPFVAKAEKAKGGV*EEHESLQ  443
            K +H  N S+A    K GG+KWKS++E EK  ++ KA + K    E ++SL+
Sbjct  119  KSEH--NGSLAKDAAKIGGEKWKSLTEEEKKVYLDKAAELKA---EYNKSLE  165


>gi|3551257|dbj|BAA32827.1|  98b [Daucus carota]
Length=502

 Score = 65.5 bits (158),  Expect = 1e-10
 Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
 Frame = +3

Query  174  KKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKW  353
            K+      +K  K  KDP KPK P SAFF+FM E R     +    K+V  VGK  G++W
Sbjct  270  KEETENDKKKKTKKEKDPLKPKHPVSAFFLFMNERRADLVAE---KKNVLEVGKITGEEW  326

Query  354  KSMSEAEKAPFVAKAEKAK  410
            K+M+E EKAP+   A+K K
Sbjct  327  KNMTEKEKAPYEEMAKKNK  345
Distribution of 139 Blast Hits on the Query Sequence
