RID=1168939584-12948-46795283770.BLASTQ4, Contig143

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168939584-12948-46795283770.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig143
Length=409

Distribution of 31 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|92870618|gb|ABE79896.1|  hypothetical protein MtrDRAFT_AC14...  87.4    1e-17
gi|115451437|ref|NP_001049319.1|  Os03g0206400 [Oryza sativa (...  76.6    2e-14 
gi|115455521|ref|NP_001051361.1|  Os03g0762500 [Oryza sativa (...  76.3    3e-14 
gi|15239192|ref|NP_199129.1|  unknown protein [Arabidopsis tha...  68.9    5e-12 
gi|115470317|ref|NP_001058757.1|  Os07g0115500 [Oryza sativa (...  67.4    1e-11 
gi|115460364|ref|NP_001053782.1|  Os04g0603400 [Oryza sativa (...  57.8    1e-08 
gi|42565375|gb|AAS20964.1|  OSJNBa0011F23.6-like protein [Hyacint  54.3    1e-07
gi|19387265|gb|AAL87176.1|AF480497_4  hypothetical protein [Or...  53.9    2e-07 
gi|116310847|emb|CAH67789.1|  OSIGBa0132E09-OSIGBa0108L24.3 [O...  53.5    2e-07
gi|115475479|ref|NP_001061336.1|  Os08g0241300 [Oryza sativa (...  44.7    1e-04 
gi|92893315|gb|ABE91722.1|  hypothetical protein MtrDRAFT_AC14...  41.2    0.001
gi|115471089|ref|NP_001059143.1|  Os07g0204400 [Oryza sativa (...  40.8    0.001 
gi|92892078|gb|ABE91096.1|  hypothetical protein MtrDRAFT_AC14...  40.0    0.002
gi|92893313|gb|ABE91720.1|  hypothetical protein MtrDRAFT_AC14...  39.3    0.004
gi|115456075|ref|NP_001051638.1|  Os03g0806800 [Oryza sativa (...  39.3    0.004 
gi|53792206|dbj|BAD52839.1|  hypothetical protein [Oryza sativa (  39.3    0.004
gi|92893319|gb|ABE91726.1|  hypothetical protein MtrDRAFT_AC14...  35.4    0.061
gi|115472919|ref|NP_001060058.1|  Os07g0572400 [Oryza sativa (...  35.0    0.080 
gi|115436048|ref|NP_001042782.1|  Os01g0288200 [Oryza sativa (...  33.1    0.30  
gi|115461979|ref|NP_001054589.1|  Os05g0138000 [Oryza sativa (...  32.3    0.52  
gi|15221150|ref|NP_175267.1|  unknown protein [Arabidopsis tha...  30.8    1.5   
gi|115441217|ref|NP_001044888.1|  Os01g0863400 [Oryza sativa (...  30.4    2.0   
gi|115474525|ref|NP_001060859.1|  Os08g0117100 [Oryza sativa (...  29.3    4.4   
gi|1350535|gb|AAC24488.1|  late embryogenesis abundant protein [P  28.9    5.7   
gi|46277255|gb|AAS86818.1|  RNA polymerase II second largest subu  28.5    7.5  
gi|15228294|ref|NP_190377.1|  heat shock protein binding / unf...  28.5    7.5   
gi|20514263|gb|AAM22960.1|AF486851_1  tubulin folding cofactor D   28.5    7.5   
gi|22331885|ref|NP_191633.2|  TTN1 (TITAN 1) [Arabidopsis thalian  28.5    7.5   
gi|7329684|emb|CAB82678.1|  beta-tubulin cofactor-like protein [A  28.5    7.5  
gi|6910581|gb|AAF31286.1|AC006424_15  Several near identical c...  28.1    9.8  
gi|15223315|ref|NP_174561.1|  cysteine-type peptidase [Arabidopsi  28.1    9.8

Alignments

 

>gi|92870618|gb|ABE79896.1|  hypothetical protein MtrDRAFT_AC141109g4v1 [Medicago truncatula]
Length=95

 Score = 87.4 bits (215),  Expect = 1e-17
 Identities = 41/83 (49%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
 Frame = +2

Query  170  EMHFFDRMTIPMRRVWTGVATRLGVRKSGLLKLRKDVRSCEYEDVHVMWEMLRRNET---  340
            ++  +  +  P+RR W  +ATR G+RK+GL KLR DV+SCEYED+ VMWEML RNE+   
Sbjct  9    QVELWQNIMHPVRRFWISIATRFGIRKTGLKKLRNDVKSCEYEDIRVMWEMLNRNESLSE  68

Query  341  -EVGRSPRRCKKRPLSNCFEWAR  406
               G SP + KK      F+WAR
Sbjct  69   FGGGNSPNKIKKIHYLKLFKWAR  91


>gi|115451437|ref|NP_001049319.1|  Os03g0206400 [Oryza sativa (japonica cultivar-group)]
 gi|26006485|gb|AAN77294.1|  Unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|108706757|gb|ABF94552.1|  expressed protein [Oryza sativa (japonica cultivar-group)]
 gi|113547790|dbj|BAF11233.1|  Os03g0206400 [Oryza sativa (japonica cultivar-group)]
Length=91

 Score = 76.6 bits (187),  Expect = 2e-14
 Identities = 32/55 (58%), Positives = 44/55 (80%), Gaps = 0/55 (0%)
 Frame = +2

Query  176  HFFDRMTIPMRRVWTGVATRLGVRKSGLLKLRKDVRSCEYEDVHVMWEMLRRNET  340
            +++DR+ +P+RR W GVA R GVR++GL +LR++V +CEYEDV VMWEML R  T
Sbjct  3    YWWDRVVLPVRRAWLGVAARFGVRQTGLWRLRQEVSTCEYEDVRVMWEMLSRTST  57


>gi|115455521|ref|NP_001051361.1|  Os03g0762500 [Oryza sativa (japonica cultivar-group)]
 gi|17027277|gb|AAL34131.1|AC090713_18  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113549832|dbj|BAF13275.1|  Os03g0762500 [Oryza sativa (japonica cultivar-group)]
Length=94

 Score = 76.3 bits (186),  Expect = 3e-14
 Identities = 33/55 (60%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
 Frame = +2

Query  185  DRMTIPMRRVWTGVATRLGVRK-SGLLKLRKDVRSCEYEDVHVMWEMLRRNETEV  346
            DR  +P++RVW G+A RLG+R+ SGL KL+K+VR+CEY DVH+MWEMLR+ +  V
Sbjct  4    DRAAVPVKRVWLGLAARLGLRRTSGLGKLKKEVRTCEYHDVHIMWEMLRKTDAPV  58


>gi|15239192|ref|NP_199129.1|  unknown protein [Arabidopsis thaliana]
 gi|9757842|dbj|BAB08279.1|  unnamed protein product [Arabidopsis thaliana]
 gi|28466795|gb|AAO44006.1|  At5g43150 [Arabidopsis thaliana]
 gi|110736408|dbj|BAF00171.1|  hypothetical protein [Arabidopsis thaliana]
Length=91

 Score = 68.9 bits (167),  Expect = 5e-12
 Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 5/74 (6%)
 Frame = +2

Query  179  FFDRMTIPMRRVWTGVATRLGVRKSGLLKLRKDVRSCEYEDVHVMWEMLRRNETEVGRSP  358
            +++ M  P RR+W     R+G R SGLL+L  DV SCEYED+H+MW +L +NE ++ R P
Sbjct  9    WWNTMAFPTRRIWNRFTVRVGFRHSGLLRLEHDVSSCEYEDIHIMWNLLHKNE-DLTRVP  67

Query  359  ----RRCKKRPLSN  388
                ++ +K+P  N
Sbjct  68   IQQQQQQRKKPCWN  81


>gi|115470317|ref|NP_001058757.1|  Os07g0115500 [Oryza sativa (japonica cultivar-group)]
 gi|22831351|dbj|BAC16195.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113610293|dbj|BAF20671.1|  Os07g0115500 [Oryza sativa (japonica cultivar-group)]
Length=94

 Score = 67.4 bits (163),  Expect = 1e-11
 Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 12/82 (14%)
 Frame = +2

Query  188  RMTIPMRRVWTGVATRLGVRKS-GLLKLRKDVRSCEYEDVHVMWEMLRRNETEVGRSPR-  361
            R  +P++RVW G++ RLG+R++ GL KLR +VR+CEY DVHVMWEML  +  +    PR 
Sbjct  7    RAAVPVKRVWLGLSARLGLRRTTGLGKLRNEVRTCEYSDVHVMWEML--SSMDAAAPPRH  64

Query  362  -------RCKKRPLSNCFEWAR  406
                   R ++RP +    W+R
Sbjct  65   AAAAAAGRKRRRPAATA-AWSR  85


>gi|115460364|ref|NP_001053782.1|  Os04g0603400 [Oryza sativa (japonica cultivar-group)]
 gi|38344154|emb|CAE01828.2|  OSJNBa0041A02.21 [Oryza sativa (japonica cultivar-group)]
 gi|113565353|dbj|BAF15696.1|  Os04g0603400 [Oryza sativa (japonica cultivar-group)]
 gi|116309664|emb|CAH66713.1|  OSIGBa0118P15.3 [Oryza sativa (indica cultivar-group)]
Length=92

 Score = 57.8 bits (138),  Expect = 1e-08
 Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
 Frame = +2

Query  188  RMTIPMRRVWTGVATRLGVRKSG----LLKLRKDVRSCEYEDVHVMWEMLRRNETEVGRS  355
            ++  P RR W  V+TR+  RK G    +LKL +DV++C Y+DV VM+E+L ++E E  R+
Sbjct  7    KVVFPARRAWAAVSTRVRARKPGSGGSILKLHEDVQTCGYKDVQVMFEIL-KSELEESRA  65

Query  356  PRRCKKRP  379
            P + +K P
Sbjct  66   PTKQRKPP  73


>gi|42565375|gb|AAS20964.1|  OSJNBa0011F23.6-like protein [Hyacinthus orientalis]
Length=82

 Score = 54.3 bits (129),  Expect = 1e-07
 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
 Frame = +2

Query  203  MRRVWTGVATRLGVRKSGLLKLRKDVRSCEYEDVHVMWEMLRRNETEVGRSPRRCKKRP  379
            ++R    V+ R    K G+LKL  DV++CEY+DV VMWEML++ E  +  +P    KRP
Sbjct  8    VKRALVAVSARAKPSKDGILKLHNDVQTCEYQDVQVMWEMLQKTEMGLMHAPPN-NKRP  65


>gi|19387265|gb|AAL87176.1|AF480497_4  hypothetical protein [Oryza sativa (japonica cultivar-group)]
 gi|38346400|emb|CAE04233.2|  OSJNBa0011F23.6 [Oryza sativa (japonica cultivar-group)]
Length=92

 Score = 53.9 bits (128),  Expect = 2e-07
 Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
 Frame = +2

Query  191  MTIPMRRVWTGVATRLGVRKSG-----LLKLRKDVRSCEYEDVHVMWEMLRRNET  340
            + +P++R W  VA RL  +K       L+KL  D+++C YEDV VMWE+L+R+ET
Sbjct  8    VVVPVKRAWVVVAARLRRKKQYDGRGVLVKLHDDIQTCAYEDVQVMWEILQRSET  62


>gi|116310847|emb|CAH67789.1|  OSIGBa0132E09-OSIGBa0108L24.3 [Oryza sativa (indica cultivar-group)]
Length=92

 Score = 53.5 bits (127),  Expect = 2e-07
 Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
 Frame = +2

Query  191  MTIPMRRVWTGVATRLGVRKSG-----LLKLRKDVRSCEYEDVHVMWEMLRRNET  340
            + +P++R W  VA RL  +K       L+KL  D+++C YEDV VMWE+L+R+ET
Sbjct  8    VVVPVKRAWVVVAARLRRKKQYDGRGVLVKLHDDIQTCGYEDVQVMWEILQRSET  62


>gi|115475479|ref|NP_001061336.1|  Os08g0241300 [Oryza sativa (japonica cultivar-group)]
 gi|40253260|dbj|BAD05398.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|40253629|dbj|BAD05573.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113623305|dbj|BAF23250.1|  Os08g0241300 [Oryza sativa (japonica cultivar-group)]
Length=91

 Score = 44.7 bits (104),  Expect = 1e-04
 Identities = 24/44 (54%), Positives = 31/44 (70%), Gaps = 4/44 (9%)
 Frame = +2

Query  206  RRVWTG-VATRLGVRKSG---LLKLRKDVRSCEYEDVHVMWEML  325
            RR W   V+ RL  RK G   LLKL +DV++C+Y+DV VM+EML
Sbjct  13   RRAWAALVSGRLRARKQGSRGLLKLHEDVQTCDYKDVQVMFEML  56


>gi|92893315|gb|ABE91722.1|  hypothetical protein MtrDRAFT_AC145222g25v1 [Medicago truncatula]
Length=64

 Score = 41.2 bits (95),  Expect = 0.001
 Identities = 14/33 (42%), Positives = 25/33 (75%), Gaps = 0/33 (0%)
 Frame = +2

Query  242  VRKSGLLKLRKDVRSCEYEDVHVMWEMLRRNET  340
            ++ +GL  L +DV++C+YEDVHV+W +L  + +
Sbjct  23   IKNTGLYDLYEDVKNCDYEDVHVLWSILHESHS  55


>gi|115471089|ref|NP_001059143.1|  Os07g0204400 [Oryza sativa (japonica cultivar-group)]
 gi|33146600|dbj|BAC79796.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
 gi|113610679|dbj|BAF21057.1|  Os07g0204400 [Oryza sativa (japonica cultivar-group)]
Length=64

 Score = 40.8 bits (94),  Expect = 0.001
 Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
 Frame = +2

Query  200  PMRRVWTGVATRLGVRKSGLLKLRKDVRSCEYEDVHVMWEML  325
            P+RR+W    +    R+ G+  L KDV+SC+ EDVHV+W +L
Sbjct  10   PLRRLWVCAHSERRNRR-GMYILYKDVQSCQDEDVHVLWSIL  50


>gi|92892078|gb|ABE91096.1|  hypothetical protein MtrDRAFT_AC146554g2v1 [Medicago truncatula]
Length=89

 Score = 40.0 bits (92),  Expect = 0.002
 Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 7/52 (13%)
 Frame = +2

Query  248  KSGLLKLRKDVRSC-EYEDVHVMWEMLRRNETEVGRSPRRCKKRPLSNCFEW  400
            ++GL+ L KD+ SC EYED+ VMW+M+  +      SP+   K+  +N   W
Sbjct  37   RNGLVSLYKDMESCGEYEDIQVMWKMIESS------SPQHACKKKRNNRSSW  82


>gi|92893313|gb|ABE91720.1|  hypothetical protein MtrDRAFT_AC145222g23v1 [Medicago truncatula]
Length=60

 Score = 39.3 bits (90),  Expect = 0.004
 Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = +2

Query  173  MHFFDRMTIPMRRVWTGVATRLGVRKSGLLKLRKDVRSCEYEDVHVMWEML  325
            M +   +  P+++VW  + +    R+ G+  L +DV+SC YEDV V+W +L
Sbjct  1    MGWLQSLFSPLKKVWFKLHSTQNKRR-GIYILYEDVKSCPYEDVQVLWSIL  50


>gi|115456075|ref|NP_001051638.1|  Os03g0806800 [Oryza sativa (japonica cultivar-group)]
 gi|30102996|gb|AAP21409.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|108711653|gb|ABF99448.1|  hypothetical protein LOC_Os03g59210 [Oryza sativa (japonica cultivar-group)]
 gi|113550109|dbj|BAF13552.1|  Os03g0806800 [Oryza sativa (japonica cultivar-group)]
Length=64

 Score = 39.3 bits (90),  Expect = 0.004
 Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
 Frame = +2

Query  200  PMRRVWTGVATRLGVRKSGLLKLRKDVRSCEYEDVHVMWEML  325
            P+R++W    +    R+ G+  L KDV+SC+ EDVHV+W +L
Sbjct  10   PLRKLWVRAHSARRNRR-GMHILYKDVKSCQDEDVHVLWSIL  50


>gi|53792206|dbj|BAD52839.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=75

 Score = 39.3 bits (90),  Expect = 0.004
 Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = +2

Query  200  PMRRVWTGVATRLGVRKSGLLKLRKDVRSCEYEDVHVMWEML  325
            P+RR+W  +   +  +K G+  L  DV+SC  EDVHV+W +L
Sbjct  10   PLRRLWCHM-NAVQRKKRGIYILYDDVKSCPCEDVHVLWSIL  50


>gi|92893319|gb|ABE91726.1|  hypothetical protein MtrDRAFT_AC145222g29v1 [Medicago truncatula]
Length=81

 Score = 35.4 bits (80),  Expect = 0.061
 Identities = 12/31 (38%), Positives = 22/31 (70%), Gaps = 0/31 (0%)
 Frame = +2

Query  248  KSGLLKLRKDVRSCEYEDVHVMWEMLRRNET  340
            K G+  L +DV++C+YEDV ++W M+  + +
Sbjct  49   KQGIHVLYEDVKACQYEDVQILWSMVMESHS  79


>gi|115472919|ref|NP_001060058.1|  Os07g0572400 [Oryza sativa (japonica cultivar-group)]
 gi|34393541|dbj|BAC83139.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|50508961|dbj|BAD31868.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113611594|dbj|BAF21972.1|  Os07g0572400 [Oryza sativa (japonica cultivar-group)]
Length=90

 Score = 35.0 bits (79),  Expect = 0.080
 Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +2

Query  173  MHFFDRMTIPMRRVWTGVATRLGVRKSGLLKLRKDVRSCEYEDVHVMWEML  325
            M +   +  P++++W  + +    +K G+  L +DV+SC  EDV ++W +L
Sbjct  20   MGWLQSLLAPLKKLWIRMHSAQR-KKRGIYILYEDVKSCPCEDVQILWSIL  69


>gi|115436048|ref|NP_001042782.1|  Os01g0288200 [Oryza sativa (japonica cultivar-group)]
 gi|56783907|dbj|BAD81344.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|57899009|dbj|BAD86858.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113532313|dbj|BAF04696.1|  Os01g0288200 [Oryza sativa (japonica cultivar-group)]
Length=80

 Score = 33.1 bits (74),  Expect = 0.30
 Identities = 13/21 (61%), Positives = 16/21 (76%), Gaps = 0/21 (0%)
 Frame = +2

Query  263  KLRKDVRSCEYEDVHVMWEML  325
            KL  +V +C YEDV VMW+ML
Sbjct  49   KLHGEVMACAYEDVQVMWDML  69


>gi|115461979|ref|NP_001054589.1|  Os05g0138000 [Oryza sativa (japonica cultivar-group)]
 gi|50511439|gb|AAT77362.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113578140|dbj|BAF16503.1|  Os05g0138000 [Oryza sativa (japonica cultivar-group)]
Length=119

 Score = 32.3 bits (72),  Expect = 0.52
 Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 10/44 (22%)
 Frame = +2

Query  218  TGVATRLG--------VRKSGLLKLRKDVRSCEYEDVHVMWEML  325
            T  ATR G        +R+S   +L  DV +C YEDV VMW ML
Sbjct  63   TTTATRTGGDVEEEVVMRRSS--QLYGDVMACAYEDVQVMWSML  104


>gi|15221150|ref|NP_175267.1|  unknown protein [Arabidopsis thaliana]
 gi|5733875|gb|AAD49763.1|AC007932_11  F11A17.11 [Arabidopsis thaliana]
 gi|38566516|gb|AAR24148.1|  At1g48330 [Arabidopsis thaliana]
 gi|40823637|gb|AAR92295.1|  At1g48330 [Arabidopsis thaliana]
Length=75

 Score = 30.8 bits (68),  Expect = 1.5
 Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 0/31 (0%)
 Frame = +2

Query  248  KSGLLKLRKDVRSCEYEDVHVMWEMLRRNET  340
            K  + +L+ DV +C YEDV VMW +L ++ +
Sbjct  39   KRTVQELQGDVMACGYEDVLVMWSILDKSNS  69


>gi|115441217|ref|NP_001044888.1|  Os01g0863400 [Oryza sativa (japonica cultivar-group)]
 gi|15290113|dbj|BAB63805.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113534419|dbj|BAF06802.1|  Os01g0863400 [Oryza sativa (japonica cultivar-group)]
Length=298

 Score = 30.4 bits (67),  Expect = 2.0
 Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 0/40 (0%)
 Frame = -3

Query  395  QSNSTVVSFCIFLGIDQLLFRFSSASPTSHAHLHTHKILH  276
            Q N   +   IF  I QL    S   PTS AHL THK  H
Sbjct  55   QLNEVGIGDDIFNYITQLQKSESGVQPTSEAHLETHKEKH  94


>gi|115474525|ref|NP_001060859.1|  Os08g0117100 [Oryza sativa (japonica cultivar-group)]
 gi|50725630|dbj|BAD33097.1|  putative RNA-binding protein RNP-D precursor [Oryza sativa (japonica 
cultivar-group)]
 gi|113622828|dbj|BAF22773.1|  Os08g0117100 [Oryza sativa (japonica cultivar-group)]
Length=319

 Score = 29.3 bits (64),  Expect = 4.4
 Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = -3

Query  329  SSASPTSHAHLHTHKILHPFAASIARFY---ERR  237
            SS SP    HLH H   H  A S ARF+   ERR
Sbjct  27   SSPSPPPPLHLHLHLHRHRLALSTARFFRLAERR  60


>gi|1350535|gb|AAC24488.1|  late embryogenesis abundant protein [Picea glauca]
Length=152

 Score = 28.9 bits (63),  Expect = 5.7
 Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 13/103 (12%)
 Frame = +2

Query  65   EKSPPPFLDFFVSRRTLSP-----LSWTRRRISVGKNSLVEMHFFDRMTIPMRRVWTGVA  229
            E  PPP   FF     LSP     +S        G+ +  E        +P   V  GV 
Sbjct  19   ESRPPPPKRFFHGLSPLSPRAEELISILEEDADCGERNAEEF-------VPAEEVVCGVM  71

Query  230  TRLGVRKSGLLKLRKDVRSCEYEDVHVMWEMLRRNETEVGRSP  358
              L    SG  +  +++RS ++ ++  M  +LR ++ E+G  P
Sbjct  72   KSLEEEISGSSR-GEEIRSSDFSNMDEMSYLLRASDDELGIPP  113


>gi|46277255|gb|AAS86818.1|  RNA polymerase II second largest subunit [Gnetum gnemon]
Length=546

 Score = 28.5 bits (62),  Expect = 7.5
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 0/26 (0%)
 Frame = -1

Query  370  FASSWGSTNFCFVSPQHLPHHMHIFI  293
            F   WG+ NF  VSP ++P+   IF+
Sbjct  32   FLEEWGTENFEEVSPSNIPNATKIFV  57


>gi|15228294|ref|NP_190377.1|  heat shock protein binding / unfolded protein binding [Arabidopsis 
thaliana]
 gi|4678334|emb|CAB41145.1|  heat shock-like protein [Arabidopsis thaliana]
 gi|22531016|gb|AAM97012.1|  heat shock protein-like protein [Arabidopsis thaliana]
 gi|23197962|gb|AAN15508.1|  heat shock protein-like protein [Arabidopsis thaliana]
Length=350

 Score = 28.5 bits (62),  Expect = 7.5
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 0/33 (0%)
 Frame = -3

Query  329  SSASPTSHAHLHTHKILHPFAASIARFYERRGE  231
            SS+S + + H H H+  HP  AS  RF  R  E
Sbjct  92   SSSSSSRYPHFHQHRPQHPPNASSFRFNPRDAE  124


>gi|20514263|gb|AAM22960.1|AF486851_1  tubulin folding cofactor D [Arabidopsis thaliana]
Length=1254

 Score = 28.5 bits (62),  Expect = 7.5
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -2

Query  339   VSFLLSISHITCTSSYSQDLTSFRSFNSPLLRTPRRVATPVQTLRIGIVILSKK  178
             + ++ S+SH   T ++SQ L SF     P++R        +  L+ GI++  +K
Sbjct  1130  LGYIASVSHFISTKAFSQ-LLSFLGHRYPMIRKAAAEQVYLALLQNGILVTEEK  1182


>gi|22331885|ref|NP_191633.2|  TTN1 (TITAN 1) [Arabidopsis thaliana]
Length=1254

 Score = 28.5 bits (62),  Expect = 7.5
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -2

Query  339   VSFLLSISHITCTSSYSQDLTSFRSFNSPLLRTPRRVATPVQTLRIGIVILSKK  178
             + ++ S+SH   T ++SQ L SF     P++R        +  L+ GI++  +K
Sbjct  1130  LGYIASVSHFISTKAFSQ-LLSFLGHRYPMIRKAAAEQVYLALLQNGILVTEEK  1182


>gi|7329684|emb|CAB82678.1|  beta-tubulin cofactor-like protein [Arabidopsis thaliana]
Length=1249

 Score = 28.5 bits (62),  Expect = 7.5
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -2

Query  339   VSFLLSISHITCTSSYSQDLTSFRSFNSPLLRTPRRVATPVQTLRIGIVILSKK  178
             + ++ S+SH   T ++SQ L SF     P++R        +  L+ GI++  +K
Sbjct  1125  LGYIASVSHFISTKAFSQ-LLSFLGHRYPMIRKAAAEQVYLALLQNGILVTEEK  1177


>gi|6910581|gb|AAF31286.1|AC006424_15  Several near identical copies of this gene are pr> [Arabidopsis 
thaliana]
Length=607

 Score = 28.1 bits (61),  Expect = 9.8
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 6/41 (14%)
 Frame = -3

Query  317  PTSHAHLH------THKILHPFAASIARFYERRGEWRHRSK  213
            P+ H   H       H ILHPFA   A   E+  EW+   K
Sbjct  393  PSIHTQAHFTAEKKKHPILHPFAKVDATRLEKLAEWKKSRK  433


>gi|15223315|ref|NP_174561.1|  cysteine-type peptidase [Arabidopsis thaliana]
Length=611

 Score = 28.1 bits (61),  Expect = 9.8
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 6/41 (14%)
 Frame = -3

Query  317  PTSHAHLH------THKILHPFAASIARFYERRGEWRHRSK  213
            P+ H   H       H ILHPFA   A   E+  EW+   K
Sbjct  354  PSIHTQAHFTAEKKKHPILHPFAKVDATRLEKLAEWKKSRK  394

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 256
Number of extensions: 7
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 409
Length of database: 101054579
Length adjustment: 101
Effective length of query: 308
Effective length of database: 72436330
Effective search space: 2535271550
Effective search space used: 2535271550
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)