Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168939622-30491-21810792690.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig145 Length=332
Score E Sequences producing significant alignments: (Bits) Value gi|108706090|gb|ABF93885.1| 60S ribosomal protein L23, putati... 177 8e-45 gi|115449557|ref|NP_001048495.1| Os02g0814700 [Oryza sativa (... 177 8e-45 gi|13430182|gb|AAK25758.1|AF334838_1 ribosomal protein L17 [Cast 177 1e-44 gi|21618149|gb|AAM67199.1| putative 60S ribosomal protein L17 [A 177 1e-44 gi|2341028|gb|AAB70426.1| Strong similarity to 60S ribosomal ... 177 1e-44 gi|15226102|ref|NP_180895.1| structural constituent of riboso... 177 1e-44 gi|2982289|gb|AAC32130.1| 60S ribosomal protein L17 [Picea maria 176 2e-44 gi|32400871|gb|AAP80667.1|AF479048_1 ribosomal Pr 117 [Triticum 176 2e-44 gi|57471720|gb|AAW50991.1| ribosomal protein L17 [Triticum ae... 176 2e-44 gi|730536|sp|Q07760|RL23_TOBAC 60S ribosomal protein L23 >gi|... 175 4e-44 gi|47824967|gb|AAT38741.1| 60S ribosomal protein L23, putative [ 161 6e-40 gi|17369866|sp|Q9XEK8|RL23_TORRU 60S ribosomal protein L23 (L... 158 6e-39 gi|50659570|gb|AAT80531.1| 60S ribosomal protein L23 [Arabido... 137 1e-32 gi|116055382|emb|CAL58050.1| 60S ribosomal protein L14/L17/L23 ( 80.5 2e-15 gi|116055381|emb|CAL58049.1| 60S ribosomal protein L14/L17/L23 ( 54.7 1e-07 gi|4007873|gb|AAC95313.1| ribosomal protein L14 [Spirogyra maxim 51.2 1e-06 gi|108796726|ref|YP_636492.1| ribosomal protein L14 [Zygnema ... 48.9 5e-06 gi|48478709|ref|YP_024316.1| ribosomal protein L14 [Saccharum... 48.1 9e-06 gi|11467228|ref|NP_043060.1| ribosomal protein L14 [Zea mays]... 48.1 9e-06 gi|118614528|ref|YP_899444.1| ribosomal protein L14 [Sorghum ... 47.8 1e-05 gi|115350000|ref|YP_764396.1| ribosomal protein L14 [Stigeocl... 47.8 1e-05 gi|49574618|ref|NP_848096.2| ribosomal protein L14 [Adiantum ... 47.4 2e-05 gi|114330006|ref|YP_740687.1| ribosomal protein L14 [Nandina ... 47.0 2e-05 gi|34501441|ref|NP_904228.1| ribosomal protein L14 [Physcomit... 47.0 2e-05 gi|41179017|ref|NP_958372.1| ribosomal protein L14 [Chlamydom... 47.0 2e-05 gi|91208937|ref|YP_538972.1| ribosomal protein L14 [Gossypium... 46.6 3e-05 gi|108796828|ref|YP_636424.1| ribosomal protein L14 [Staurast... 46.6 3e-05 gi|7524926|ref|NP_045928.1| ribosomal protein L14 [Chlorella ... 46.2 3e-05 gi|22725683|gb|AAN04890.1| ribosomal protein L14 [Vigna angulari 45.8 5e-05 gi|91214177|ref|YP_538801.1| ribosomal protein L14 [Glycine m... 45.8 5e-05 gi|118430338|ref|YP_874773.1| ribosomal protein L14 [Agrostis... 45.4 6e-05 gi|108744230|gb|ABD62228.1| ribosomal protein L14 [Chlorokybus a 45.4 6e-05 gi|108773104|ref|YP_636013.1| ribosomal protein L14 [Scenedes... 45.4 6e-05 gi|68164840|ref|YP_247636.1| ribosomal protein L14 [Cucumis s... 45.4 6e-05 gi|14017608|ref|NP_114294.1| ribosomal protein L14 [Triticum ... 45.4 6e-05 gi|13518474|ref|NP_084833.1| ribosomal protein L14 [Lotus cor... 45.4 6e-05 gi|11466740|ref|NP_039336.1| ribosomal protein L14 [Marchanti... 45.1 8e-05 gi|115605058|ref|YP_784510.1| ribosomal protein L14 [Piper ce... 44.7 1e-04 gi|108773375|ref|YP_635837.1| ribosomal protein L14 [Oltmanns... 44.7 1e-04 gi|69215779|gb|AAZ03862.1| ribosomal protein L14 [Ranunculus ... 44.7 1e-04 gi|11467772|ref|NP_050823.1| ribosomal protein L14 [Nephrosel... 44.7 1e-04 gi|115604970|ref|YP_784423.1| ribosomal protein L14 [Drimys g... 44.3 1e-04 gi|114329784|ref|YP_740602.1| ribosomal protein L14 [Platanus... 44.3 1e-04 gi|114329691|ref|YP_740512.1| ribosomal protein L14 [Citrus s... 44.3 1e-04 gi|81301604|ref|YP_398900.1| ribosomal protein L14 [Nicotiana... 44.3 1e-04 gi|32480879|ref|NP_862790.1| ribosomal protein L14 [Calycanth... 44.3 1e-04 gi|116617144|ref|YP_817519.1| ribosomal protein L14 [Coffea a... 43.9 2e-04 gi|115531948|ref|YP_784103.1| ribosomal protein L14 [Pelargon... 43.9 2e-04 gi|114107169|ref|YP_740154.1| ribosomal protein L14 [Daucus c... 43.9 2e-04 gi|52220846|ref|YP_087002.1| ribosomal protein L14 [Panax gin... 43.9 2e-04 gi|78102574|ref|YP_358714.1| ribosomal protein L14 [Nicotiana... 43.9 2e-04 gi|75755696|ref|YP_319800.1| ribosomal protein L14 [Acorus ca... 43.9 2e-04 gi|225233|prf||1211235BQ ribosomal protein L14 43.9 2e-04 gi|114107083|ref|YP_740239.1| ribosomal protein L14 [Lirioden... 43.5 2e-04 gi|110227115|ref|YP_665594.1| ribosomal protein L14 [Populus ... 43.5 2e-04 gi|28261753|ref|NP_783267.1| ribosomal protein L14 [Atropa be... 43.5 2e-04 gi|77553347|gb|ABA96143.1| retrotransposon protein, putative,... 43.5 2e-04 gi|116008997|gb|ABJ52167.1| ribosomal protein L14 [Phyllostachys 43.1 3e-04 gi|114804300|ref|YP_762297.1| ribosomal protein L14 [Morus in... 43.1 3e-04 gi|115440419|ref|NP_001044489.1| Os01g0789500 [Oryza sativa (... 43.1 3e-04 gi|91984028|ref|YP_567114.1| ribosomal protein L14 [Vitis vin... 43.1 3e-04 gi|50878303|gb|AAT85078.1| putative 50S ribosomal protein L14... 43.1 3e-04 gi|69215781|gb|AAZ03863.1| ribosomal protein L14 [Typha latifoli 43.1 3e-04 gi|108802677|ref|YP_636335.1| ribosomal protein L14 [Eucalypt... 43.1 3e-04 gi|81176288|ref|YP_398365.1| ribosomal protein L14 [Lactuca s... 43.1 3e-04 gi|50725918|dbj|BAD33446.1| putative ribosomal protein L14 [O... 43.1 3e-04 gi|11466363|ref|NP_038366.1| ribosomal protein L14 [Mesostigm... 43.1 3e-04 gi|11466826|ref|NP_039422.1| ribosomal protein L14 [Oryza sat... 43.1 3e-04 gi|34500950|ref|NP_904135.1| ribosomal protein L14 [Amborella... 42.7 4e-04 gi|22296316|dbj|BAC10087.1| Chloroplast 50S ribosomal protein... 42.7 4e-04 gi|7525069|ref|NP_051094.1| ribosomal protein L14 [Arabidopsi... 42.7 4e-04 gi|121720650|ref|YP_001001571.1| ribosomal protein L14 [Nupha... 42.4 5e-04 gi|12312|emb|CAA31717.1| ribosomal protein L14 [Spinacia olerace 42.4 5e-04 gi|108796886|ref|YP_636184.1| ribosomal protein L14 [Pseudend... 42.4 5e-04 gi|108773413|ref|YP_635932.1| ribosomal protein L14 [Helicosp... 42.4 5e-04 gi|69215775|gb|AAZ03860.1| ribosomal protein L14 [Ginkgo biloba] 42.4 5e-04 gi|50346820|ref|YP_053191.1| ribosomal protein L14 [Nymphaea ... 42.4 5e-04 gi|6491770|emb|CAB61886.1| ribosomal protein L17 [Solanum lycope 42.4 5e-04 gi|7524689|ref|NP_042443.1| ribosomal protein L14 [Pinus thun... 42.4 5e-04 gi|11497563|ref|NP_054971.1| ribosomal protein L14 [Spinacia ... 42.4 5e-04 gi|28202209|ref|NP_777450.1| ribosomal protein L14 [Anthocero... 42.4 5e-04 gi|108773253|ref|YP_635786.1| ribosomal protein L14 [Chara vu... 42.0 7e-04 gi|13518370|ref|NP_084729.1| ribosomal protein L14 [Oenothera... 42.0 7e-04 gi|69215783|gb|AAZ03864.1| ribosomal protein L14 [Yucca schidige 41.6 8e-04 gi|115391937|ref|YP_778526.1| ribosomal protein L14 [Jasminum... 40.4 0.002 gi|22711950|ref|NP_683838.1| ribosomal protein L14 [Chaetosph... 40.0 0.002 gi|21555596|gb|AAM63894.1| ribosomal protein, putative [Arabidop 35.0 0.080 gi|18140858|gb|AAL60451.1|AF402992_1 HUELLENLOS [Arabidopsis tha 35.0 0.080 gi|8778471|gb|AAF79479.1|AC022492_23 F1L3.27 [Arabidopsis thalia 35.0 0.080 gi|15220161|ref|NP_173200.1| HLL (HUELLENLOS); structural con... 35.0 0.080 gi|24414020|dbj|BAC22270.1| hypothetical protein [Oryza sativa ( 32.3 0.52 gi|113170483|ref|YP_717274.1| Rpl14 [Ostreococcus tauri] >gi|... 32.0 0.67 gi|110225652|ref|YP_665658.1| ribosomal protein L14 [Nephrose... 31.2 1.1 gi|132676|sp|P26820|RK14_VIGUN Chloroplast 50S ribosomal prot... 30.8 1.5 gi|116059163|emb|CAL54870.1| DEAD-box protein abstrakt (ISS) [Os 30.4 2.0 gi|110225682|ref|YP_665687.1| ribosomal protein L14 [Mesostig... 29.6 3.3 gi|115488534|ref|NP_001066754.1| Os12g0472800 [Oryza sativa (... 29.6 3.3 gi|115460952|ref|NP_001054076.1| Os04g0648600 [Oryza sativa (... 29.3 4.4 gi|115451075|ref|NP_001049138.1| Os03g0176500 [Oryza sativa (... 29.3 4.4 gi|38345494|emb|CAD41705.2| OSJNBa0010D21.7 [Oryza sativa (japon 29.3 4.4
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 264 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 332 Length of database: 101054579 Length adjustment: 78 Effective length of query: 254 Effective length of database: 78953357 Effective search space: 2526507424 Effective search space used: 2526507424 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)