Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168940313-14050-41049827321.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig155 Length=282
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|21618144|gb|AAM67194.1| glycolate oxidase, putative [Arabidop 77.0 2e-14 gi|15231792|ref|NP_188031.1| glycolate oxidase/ oxidoreductas... 77.0 2e-14 gi|9294640|dbj|BAB02979.1| glycolate oxidase [Arabidopsis thalia 77.0 2e-14 gi|21537253|gb|AAM61594.1| glycolate oxidase, putative [Arabidop 76.3 3e-14 gi|15231789|ref|NP_188029.1| glycolate oxidase/ oxidoreductas... 76.3 3e-14 gi|115473355|ref|NP_001060276.1| Os07g0616500 [Oryza sativa (... 73.9 2e-13 gi|15236857|ref|NP_193570.1| glycolate oxidase/ oxidoreductas... 62.8 4e-10 gi|2501812|gb|AAB80700.1| glycolate oxidase [Arabidopsis thalian 62.0 6e-10 gi|15229497|ref|NP_188059.1| glycolate oxidase/ oxidoreductas... 62.0 6e-10 gi|228403|prf||1803516A glycolate oxidase 62.0 6e-10 gi|115455773|ref|NP_001051487.1| Os03g0786100 [Oryza sativa (... 61.2 1e-09 gi|1773330|gb|AAB40396.1| glycolate oxidase [Mesembryanthemum cr 61.2 1e-09 gi|27549566|gb|AAO17067.1| glycolate oxidase [Zantedeschia aethi 60.5 2e-09 gi|16226772|gb|AAL16258.1|AF428328_1 AT3g14420/MOA2_2 [Arabidops 60.1 2e-09 gi|79313229|ref|NP_001030694.1| glycolate oxidase/ oxidoreductas 60.1 2e-09 gi|30683154|ref|NP_850585.1| glycolate oxidase/ oxidoreductase [ 60.1 2e-09 gi|15231850|ref|NP_188060.1| glycolate oxidase/ oxidoreductas... 60.1 2e-09 gi|116309754|emb|CAH66797.1| H0215F08.8 [Oryza sativa (indica cu 59.7 3e-09 gi|115460652|ref|NP_001053926.1| Os04g0623600 [Oryza sativa (... 59.7 3e-09 gi|38344170|emb|CAE03501.2| OSJNBa0053K19.9 [Oryza sativa (japon 59.7 3e-09 gi|2570515|gb|AAB82143.1| glycolate oxidase [Oryza sativa] 59.7 3e-09 gi|54043095|gb|AAV28535.1| glycolate oxidase [Brassica napus] 59.7 3e-09 gi|121530|sp|P05414|GOX_SPIOL Peroxisomal (S)-2-hydroxy-acid ... 59.7 3e-09 gi|999542|pdb|1GYL|A Chain A, Glycolate Oxidase (E.C.1.1.3.15... 59.7 3e-09 gi|217909|dbj|BAA03131.1| glycolate oxidase [Cucurbita cv. Kurok 59.7 3e-09 gi|2554675|pdb|1AL8| Chain , Three-Dimensional Structure Of... 59.7 3e-09 gi|115470621|ref|NP_001058909.1| Os07g0152900 [Oryza sativa (... 59.3 4e-09 gi|115460650|ref|NP_001053925.1| Os04g0623500 [Oryza sativa (... 55.8 4e-08 gi|1063400|emb|CAA63482.1| glycolate oxidase [Solanum lycopersic 55.1 7e-08 gi|90761110|gb|ABD97860.1| glycolate oxidase [Pachysandra termin 54.3 1e-07 gi|17473683|gb|AAL38298.1| glycolate oxidase [Arabidopsis tha... 53.9 2e-07 gi|66730860|dbj|BAD98962.1| glycolate oxidase [Solanum lycopersi 53.5 2e-07 gi|3435306|gb|AAC32392.1| glycolate oxidase [Medicago sativa] 53.5 2e-07 gi|6063024|gb|AAF03097.1|AF162196_1 glycolate oxidase [Lactuca s 48.5 7e-06 gi|37927400|gb|AAP69813.1| putative glycolate oxidase [Vitis vin 41.2 0.001 gi|116055907|emb|CAL57992.1| Glycolate oxidase (ISS) [Ostreococc 31.6 0.87 gi|18129692|gb|AAK97436.2|AF385367_1 IAA amidohydrolase [Arab... 30.8 1.5 gi|21554648|gb|AAM63645.1| IAA-amino acid hydrolase (ILR1) [Arab 30.8 1.5 gi|887785|gb|AAB60293.1| ILR1 30.8 1.5 gi|15233011|ref|NP_186937.1| ILR1 (IAA-LEUCINE RESISTANT 1); ... 30.8 1.5 gi|108708807|gb|ABF96602.1| retrotransposon protein, putative... 29.6 3.3 gi|41469127|gb|AAS07078.1| putative polyprotein [Oryza sativa (j 29.6 3.3 gi|30689293|ref|NP_564238.2| ANAC008; transcription factor [A... 28.9 5.6 gi|12321499|gb|AAG50802.1|AC079281_4 hypothetical protein [Arabi 28.9 5.6 gi|12320749|gb|AAG50527.1|AC084221_9 unknown protein [Arabidopsi 28.9 5.6
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 277 Number of extensions: 12 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 282 Length of database: 101054579 Length adjustment: 64 Effective length of query: 218 Effective length of database: 82920243 Effective search space: 2487607290 Effective search space used: 2487607290 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)