>gi|806310|gb|AAA66288.1|  proline-rich protein
Length=185

 Score = 89.0 bits (219),  Expect = 4e-17
 Identities = 75/198 (37%), Positives = 98/198 (49%), Gaps = 46/198 (23%)
 Frame = +1

Query  316  RNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYMNLSLQSQNPNHQYMSL  495
            +NH+C +LQ    F +L L++H F+SL   SH F SL    Q +NL L+    NH++ SL
Sbjct  22   KNHQCTNLQ----FTSLQLKNHLFISLQFISHPFTSL----QCINLQLK----NHRFTSL  69

Query  496  Q------RSLRCMSLQRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMS  657
            Q       SL+C+    N Q  N    SHQF   SHQ      +SHQF +    SHQ   
Sbjct  70   QFINHLFTSLQCI----NPQLKNHPFISHQF--TSHQCTSLQCISHQFTSHQCTSHQL--  121

Query  658  LQRSLRCMSLQRNHQYMNLSHQSHQFMN---LSHQ--SHQFMNLQRKRSQNPNHQYMSLQ  822
                       R+HQY N    SHQF +    SHQ  SHQ  +LQ    Q  NHQ++   
Sbjct  122  -----------RSHQYTNHPFISHQFTSHQCTSHQLRSHQCTSLQCTSHQYTNHQFI---  167

Query  823  RSLQCMNLSHQNHQYMNL  876
             SLQ  NL   +HQ+ +L
Sbjct  168  -SLQLRNLLFTSHQFTSL  184


 Score = 69.7 bits (169),  Expect = 2e-11
 Identities = 60/185 (32%), Positives = 92/185 (49%), Gaps = 22/185 (11%)
 Frame = +1

Query  526   RNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQ------RSLRCMSL  687
             R+ QF +      QF+S   ++HQ  NL  QF +L  ++H F+SLQ       SL+C++L
Sbjct  2     RSPQFTSHLFTHRQFISPQLKNHQCTNL--QFTSLQLKNHLFISLQFISHPFTSLQCINL  59

Query  688   Q-RNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQ------RSLQCMNL  846
             Q +NH++ +L   +H F +L   + Q  N      Q  +HQ  SLQ       S QC + 
Sbjct  60    QLKNHRFTSLQFINHLFTSLQCINPQLKNHPFISHQFTSHQCTSLQCISHQFTSHQCTSH  119

Query  847   SHQNHQYMNLSHQNRQFMNLRRKRSQSPNHRFTNLR-RSHQYMN------LLRNHRCMSH  1005
               ++HQY N    + QF + +    Q  +H+ T+L+  SHQY N       LRN    SH
Sbjct  120   QLRSHQYTNHPFISHQFTSHQCTSHQLRSHQCTSLQCTSHQYTNHQFISLQLRNLLFTSH  179

Query  1006  LMVTI  1020
                ++
Sbjct  180   QFTSL  184


 Score = 59.3 bits (142),  Expect = 3e-08
 Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 19/143 (13%)
 Frame = +1

Query  691   RNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQ------RSLQCMNLSH  852
             R+ Q+ +      QF++   ++HQ  NLQ    Q  NH ++SLQ       SLQC+NL  
Sbjct  2     RSPQFTSHLFTHRQFISPQLKNHQCTNLQFTSLQLKNHLFISLQFISHPFTSLQCINLQL  61

Query  853   QNHQYMNLSHQNRQFMNLRRKRSQSPNHRFTNLR-RSHQYMNL------LRNHRCMSHLM  1011
             +NH++ +L   N  F +L+    Q  NH F + +  SHQ  +L        +H+C SH +
Sbjct  62    KNHRFTSLQFINHLFTSLQCINPQLKNHPFISHQFTSHQCTSLQCISHQFTSHQCTSHQL  121

Query  1012  VTIQDT------LQWGSHKTSPH  1062
              + Q T       Q+ SH+ + H
Sbjct  122   RSHQYTNHPFISHQFTSHQCTSH  144


>gi|119888006|gb|ABM05955.1|  proline-rich protein [Gossypium hirsutum]
Length=164

 Score = 79.7 bits (195),  Expect = 2e-14
 Identities = 52/123 (42%), Positives = 73/123 (59%), Gaps = 32/123 (26%)
 Frame = +1

Query  571  MSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSH  750
            +S++HQ  + ++LSHQF++L              R  SL  NHQYMNL  Q  + ++L  
Sbjct  6    LSMNHQRRKSLSLSHQFIHLQ-------------RKRSLNPNHQYMNL--QRRKSLSL--  48

Query  751  QSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQFMNLRRKRSQSP  930
             SHQF++ QRKRS +PNHQYM+ QR  + +NLSH             QF++ +RKRS SP
Sbjct  49   -SHQFIHHQRKRSLSPNHQYMNPQRR-KSLNLSH-------------QFIHHQRKRSLSP  93

Query  931  NHR  939
            NH+
Sbjct  94   NHQ  96


 Score = 75.9 bits (185),  Expect = 3e-13
 Identities = 42/99 (42%), Positives = 67/99 (67%), Gaps = 9/99 (9%)
 Frame = +1

Query  706  MNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQ--NHQYMNLS  879
            ++++HQ  + ++LSHQ   F++LQRKRS NPNHQYM+LQR  + ++LSHQ  +HQ     
Sbjct  6    LSMNHQRRKSLSLSHQ---FIHLQRKRSLNPNHQYMNLQRR-KSLSLSHQFIHHQRKRSL  61

Query  880  HQNRQFMNLRRKRSQSPNHRFTNLRRSHQYMNLLRNHRC  996
              N Q+MN +R++S + +H+F + +R     +L  NH+C
Sbjct  62   SPNHQYMNPQRRKSLNLSHQFIHHQRKR---SLSPNHQC  97


 Score = 64.7 bits (156),  Expect = 7e-10
 Identities = 55/133 (41%), Positives = 73/133 (54%), Gaps = 36/133 (27%)
 Frame = +1

Query  196  NPNPLSMNPQrrrsrspshrFTNLQRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQ  375
            N +PLSMN QRR+S S SH+F +LQR++S NPNHQ+MNL R              +LSL 
Sbjct  2    NISPLSMNHQRRKSLSLSHQFIHLQRKRSLNPNHQYMNLQRR------------KSLSL-  48

Query  376  SHQFMSLSHQSHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSH  555
                      SHQF+  QR         +S +PNHQYM+ QR     SL  + QF++  H
Sbjct  49   ----------SHQFIHHQRK--------RSLSPNHQYMNPQRR---KSLNLSHQFIH--H  85

Query  556  QSHQFMSLSHQSH  594
            Q  + +S +HQ H
Sbjct  86   QRKRSLSPNHQCH  98


 Score = 57.8 bits (138),  Expect = 9e-08
 Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 51/141 (36%)
 Frame = +1

Query  388  MSLSHQSHQFMSLQRNHQYMNLSLQ-SQNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQSH  564
            +S++HQ  + +SL  +HQ+++L  + S NPNHQYM+LQR          R+ ++LSHQ  
Sbjct  6    LSMNHQRRKSLSL--SHQFIHLQRKRSLNPNHQYMNLQR----------RKSLSLSHQF-  52

Query  565  QFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNL  744
                          + HQ       +HQ+M+ QR           + +NL          
Sbjct  53   --------------IHHQRKRSLSPNHQYMNPQR----------RKSLNL----------  78

Query  745  SHQSHQFMNLQRKRSQNPNHQ  807
               SHQF++ QRKRS +PNHQ
Sbjct  79   ---SHQFIHHQRKRSLSPNHQ  96


 Score = 48.9 bits (115),  Expect = 4e-05
 Identities = 44/94 (46%), Positives = 56/94 (59%), Gaps = 19/94 (20%)
 Frame = +1

Query  166  HQFTNLQR--SQNPNPLSMNPQrrrsrspshrFTNLQRRKSQNPNHQFMNLPRNHRCMSL  339
            HQF +LQR  S NPN   MN QRR+S S SH+F + QR++S +PNHQ+MN  R       
Sbjct  20   HQFIHLQRKRSLNPNHQYMNLQRRKSLSLSHQFIHHQRKRSLSPNHQYMNPQR-------  72

Query  340  QRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQ  441
               R+ +NL   SHQF  + HQ  +  SL  NHQ
Sbjct  73   ---RKSLNL---SHQF--IHHQRKR--SLSPNHQ  96


 Score = 37.7 bits (86),  Expect = 0.097
 Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
 Frame = +1

Query  166  HQFTNLQR--SQNPNPLSMNPQrrrsrspshrFTNLQRRKSQNPNHQFMNLPRNHR  327
            HQF + QR  S +PN   MNPQRR+S + SH+F + QR++S +PNHQ    P+  +
Sbjct  50   HQFIHHQRKRSLSPNHQYMNPQRRKSLNLSHQFIHHQRKRSLSPNHQCHGPPKKEK  105


>gi|553111|gb|AAA33969.1|  hydroproline-rich protein
Length=121

 Score = 65.5 bits (158),  Expect = 4e-10
 Identities = 56/147 (38%), Positives = 71/147 (48%), Gaps = 34/147 (23%)
 Frame = +1

Query  475  NHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFM  654
            NH++ SLQ    C+    N Q  N    SHQF S            HQ  +L   SH F 
Sbjct  1    NHRFTSLQ----CI----NPQLKNHPFISHQFTS------------HQCTSLQFTSHPFT  40

Query  655  SLQRSLRCMSLQ-RNHQYMNLSHQSHQFMN---LSHQ--SHQFMNLQRKRSQNPNHQYMS  816
            S Q    C S Q R+HQY N    SHQF +    SHQ  SHQ  +LQ    Q  NHQ++ 
Sbjct  41   SHQ----CTSHQLRSHQYTNHPFISHQFTSHQCTSHQLRSHQCTSLQCTSHQYTNHQFI-  95

Query  817  LQRSLQCMNLSHQNHQYMNLSHQNRQF  897
               SLQC +  + NHQ+++L  +N  F
Sbjct  96   ---SLQCTSHQYTNHQFISLQLRNLLF  119


 Score = 62.8 bits (151),  Expect = 3e-09
 Identities = 54/129 (41%), Positives = 66/129 (51%), Gaps = 24/129 (18%)
 Frame = +1

Query  319  NHRCMSLQ------RNRQFMNLSLQSHQFMSLSHQSHQFMSLQ------RNHQYMNLSLQ  462
            NHR  SLQ      +N  F++    SHQ  SL   SH F S Q      R+HQY N    
Sbjct  1    NHRFTSLQCINPQLKNHPFISHQFTSHQCTSLQFTSHPFTSHQCTSHQLRSHQYTNHPFI  60

Query  463  S-QNPNHQYMSLQ-RSLRCMSLQRNRQFMNLSHQ--SHQFMSLSHQSHQYMNLSHQFMNL  630
            S Q  +HQ  S Q RS +C SLQ        SHQ  +HQF+SL   SHQY N  HQF++L
Sbjct  61   SHQFTSHQCTSHQLRSHQCTSLQCT------SHQYTNHQFISLQCTSHQYTN--HQFISL  112

Query  631  SHQSHQFMS  657
              ++  F S
Sbjct  113  QLRNLLFTS  121


 Score = 44.7 bits (104),  Expect = 8e-04
 Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 31/136 (22%)
 Frame = +1

Query  640   SHQFMSLQRSLRCMSLQ-RNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMS  816
             +H+F SLQ    C++ Q +NH +++    SHQ  +L   SH F                 
Sbjct  1     NHRFTSLQ----CINPQLKNHPFISHQFTSHQCTSLQFTSHPFT----------------  40

Query  817   LQRSLQCMNLSHQNHQYMNLSHQNRQFMNLRRKRSQSPNHRFTNLR-RSHQYMN------  975
                S QC +   ++HQY N    + QF + +    Q  +H+ T+L+  SHQY N      
Sbjct  41    ---SHQCTSHQLRSHQYTNHPFISHQFTSHQCTSHQLRSHQCTSLQCTSHQYTNHQFISL  97

Query  976   LLRNHRCMSHLMVTIQ  1023
                +H+  +H  +++Q
Sbjct  98    QCTSHQYTNHQFISLQ  113


 Score = 32.3 bits (72),  Expect = 4.1
 Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
 Frame = +1

Query  124  TNLPR*SHPQFTNH----HQFTNLQRSQNP--NPLSMNPQrrrsrspshrFTNLQRRKSQ  285
            T+L   SHP FT+H    HQ  + Q + +P  +    + Q    +  SH+ T+LQ    Q
Sbjct  30   TSLQFTSHP-FTSHQCTSHQLRSHQYTNHPFISHQFTSHQCTSHQLRSHQCTSLQCTSHQ  88

Query  286  NPNHQFMNLPRNHRCMSLQ-RNRQFMNLSLQSHQFMS  393
              NHQF++L    +C S Q  N QF++L L++  F S
Sbjct  89   YTNHQFISL----QCTSHQYTNHQFISLQLRNLLFTS  121


>gi|225641|prf||1308219B  ORF 2
Length=203

 Score = 58.9 bits (141),  Expect = 4e-08
 Identities = 67/221 (30%), Positives = 93/221 (42%), Gaps = 44/221 (19%)
 Frame = +1

Query  400   HQSHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSL  579
             H    ++ L RNH + N  L  +N  HQ  +L        L RN   M + H+S   +  
Sbjct  5     HHLSIYLLLMRNH-HQNTYLLMRN-RHQNTNL--------LMRNHP-MRIHHRSTNHLMR  53

Query  580   SHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSH  759
             SHQS  ++  SH      HQS   +          L R+H      HQ+   +  +H  H
Sbjct  54    SHQSTNHLMRSH------HQSMNHLMRNHHQNTNHLMRSH------HQNTNHLMRNH--H  99

Query  760   QFMN-LQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQFMNLRRKRSQSPNH  936
             Q  N L R   Q+ NH   S Q +   M   HQ+  ++  +H   Q  NL +K     NH
Sbjct  100   QNTNHLMRSHHQSTNHLMRSHQSTSHLMRSHHQSINHLMRNH--HQNTNLLKKSHHMKNH  157

Query  937   R-FTNL--RRSHQYMN------------LLRN-HRCMSHLM  1011
             R  TNL  +  HQ  N            L+RN H+CM+ LM
Sbjct  158   RQNTNLLMKSHHQNTNLPLKSHHQCTHPLMRNHHQCMNPLM  198


 Score = 52.0 bits (123),  Expect = 5e-06
 Identities = 65/207 (31%), Positives = 93/207 (44%), Gaps = 37/207 (17%)
 Frame = +1

Query  301  FMNLPRNHRCMS--LQRNR-QFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYMNLSLQSQN  471
            ++ L RNH   +  L RNR Q  NL +++H  M + H+S     L R+HQ  N  ++S  
Sbjct  10   YLLLMRNHHQNTYLLMRNRHQNTNLLMRNHP-MRIHHRSTNH--LMRSHQSTNHLMRS--  64

Query  472  PNHQYMS-LQRSLRCMSLQRNRQFMNLSHQSHQFMSLSHQ--SHQYMNLSHQFMNLSHQS  642
             +HQ M+ L R+      Q     M   HQ+   +  +H   ++  M   HQ  N   +S
Sbjct  65   -HHQSMNHLMRNHH----QNTNHLMRSHHQNTNHLMRNHHQNTNHLMRSHHQSTNHLMRS  119

Query  643  HQFMS-LQRSLRCMSLQRNHQYMN-LSHQSHQFMNLSHQSHQFMN-------LQRKRSQN  795
            HQ  S L RS        +HQ +N L    HQ  NL  +SH   N       L +   QN
Sbjct  120  HQSTSHLMRS--------HHQSINHLMRNHHQNTNLLKKSHHMKNHRQNTNLLMKSHHQN  171

Query  796  PNHQYMSLQRSLQCMN-LSHQNHQYMN  873
             N   + L+   QC + L   +HQ MN
Sbjct  172  TN---LPLKSHHQCTHPLMRNHHQCMN  195


 Score = 50.8 bits (120),  Expect = 1e-05
 Identities = 62/225 (27%), Positives = 93/225 (41%), Gaps = 37/225 (16%)
 Frame = +1

Query  94   PAMGNHLLLFTNLPR*SHPQFTNHHQFTNL---QRSQNPNPLSMNPQrrrsrspshrFTN  264
            P   +HL ++  L R       NHHQ T L    R QN N L  N   R         TN
Sbjct  1    PMKKHHLSIYLLLMR-------NHHQNTYLLMRNRHQNTNLLMRNHPMRIHHRS----TN  49

Query  265  LQRRKSQNPNH------QFMN-LPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMS  423
               R  Q+ NH      Q MN L RNH     Q     M    Q+   +  +H  +    
Sbjct  50   HLMRSHQSTNHLMRSHHQSMNHLMRNHH----QNTNHLMRSHHQNTNHLMRNHHQNTNHL  105

Query  424  LQRNHQYMNLSLQS-QNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLSHQSHQY  600
            ++ +HQ  N  ++S Q+ +H   S  +S+  + ++ + Q  NL  +SH   +    ++  
Sbjct  106  MRSHHQSTNHLMRSHQSTSHLMRSHHQSINHL-MRNHHQNTNLLKKSHHMKNHRQNTNLL  164

Query  601  MNLSHQFMNLSHQSHQFMSLQRSLRCMS--LQRNHQYMNLSHQSH  729
            M   HQ  NL  +SH         +C    ++ +HQ MN   +SH
Sbjct  165  MKSHHQNTNLPLKSHH--------QCTHPLMRNHHQCMNPLMRSH  201


>gi|102139750|gb|ABF69957.1|  hypothetical protein MA4_25J11.28 [Musa acuminata]
Length=686

 Score = 53.9 bits (128),  Expect = 1e-06
 Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 30/204 (14%)
 Frame = +1

Query  268  QRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYM  447
            Q+++ Q  + Q     +    +S Q       LSLQ+ Q + L  Q  Q+  L +     
Sbjct  474  QQQQQQQQSSQISQAQQPQESLSQQ-------LSLQTQQLL-LQLQQQQYQQLNQQEPQQ  525

Query  448  NLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMN  627
            NLS  +QN NHQ+   Q+      LQ+  +  N + +  Q + L  Q  Q M L  Q   
Sbjct  526  NLSSPTQNQNHQHQPQQKP---SHLQQQNEQANQTQEQQQLLYLQQQQQQ-MYLHQQ---  578

Query  628  LSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQ  807
            L  Q  Q +  Q+ L+    Q   Q+        Q   L  Q  Q + LQ++  Q     
Sbjct  579  LYLQQQQQLLQQQMLQQQQQQAPQQFF------QQQQLLQQQQQQLLLLQQQHQQ-----  627

Query  808  YMSLQRSLQCMNLSHQNHQYMNLS  879
                Q+ LQ   L HQ  Q  + S
Sbjct  628  ----QQLLQVQQLEHQQQQRFDAS  647


>gi|50511375|gb|AAT77298.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
Length=254

 Score = 50.4 bits (119),  Expect = 1e-05
 Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 13/210 (6%)
 Frame = +1

Query  316  RNHRCMSLQRNRQFMNLSLQSHQF-MSLSHQSHQFMSLQRNHQYMNLSLQSQNPNHQYMS  492
            R  +  SL+R+R    +  +       +S    Q   L+R+        +S +PN Q  S
Sbjct  17   RRSQRQSLRRSRSRSRILTRRQSLGQKMSPSRSQRQCLRRSRSRSRQLTRSLSPN-QRQS  75

Query  493  LQRSLRCMSLQRNRQFMNLSHQSHQFMSLSH-QSHQYMNLSHQFMNLSHQSHQFMSLQRS  669
            L ++      Q  RQ    + +  Q +SLS  QS  Y    +Q  +LSH  +Q   L+RS
Sbjct  76   LNQN------QSQRQSPRHNQKQSQSLSLSQSQSPSYTQNQNQSPSLSHSQNQIPRLRRS  129

Query  670  LRCM-SLQRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNL  846
                 SL  N    +L H+ +Q  N +    Q  +L R+ +++ +  +   Q   Q  + 
Sbjct  130  QSLNPSLNLNR---SLPHRLNQRQNRNQNQRQSQSLSRRLNRSQSESHTQSQNQNQNPSQ  186

Query  847  SHQNHQYMNLSHQNRQFMNLRRKRSQSPNH  936
              + +   +LS         RRKR + P H
Sbjct  187  KQKQNHSQSLSPSQNPSQPQRRKRLRRPTH  216


 Score = 47.4 bits (111),  Expect = 1e-04
 Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 28/197 (14%)
 Frame = +1

Query  412  QFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLR-CMSLQRNR-QFMNLSHQSHQFMSLSH  585
            Q  SL+R+     +  + Q+   Q MS  RS R C+   R+R + +  S   +Q  SL+ 
Sbjct  20   QRQSLRRSRSRSRILTRRQSLG-QKMSPSRSQRQCLRRSRSRSRQLTRSLSPNQRQSLNQ  78

Query  586  QSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQF  765
               Q  +  H     + +  Q +SL +S          Q  + +   +Q  +LSH  +Q 
Sbjct  79   NQSQRQSPRH-----NQKQSQSLSLSQS----------QSPSYTQNQNQSPSLSHSQNQI  123

Query  766  MNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQFMNLRRK--RSQSPNHR  939
              L+R +S NP+   ++L RSL      H+ +Q  N +   RQ  +L R+  RSQS +H 
Sbjct  124  PRLRRSQSLNPS---LNLNRSLP-----HRLNQRQNRNQNQRQSQSLSRRLNRSQSESHT  175

Query  940  FTNLRRSHQYMNLLRNH  990
             +  +  +      +NH
Sbjct  176  QSQNQNQNPSQKQKQNH  192


>gi|51997115|emb|CAH03798.1|  Gtt5 protein [Gerbera hybrid cultivar]
Length=157

 Score = 49.7 bits (117),  Expect = 2e-05
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 26/138 (18%)
 Frame = +1

Query  379  HQFMSLSHQS-------HQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSLQRN--  531
            HQF S+SH         HQF S+   H      L  ++ +HQ+ S+     C  +Q++  
Sbjct  2    HQFQSISHCHLIQKSCHHQFRSINHCH------LIQKSCHHQFRSINH---CHLIQKSCH  52

Query  532  RQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRN--HQY  705
             QF ++SH  H      H  HQ+ +++H  +      HQF+S+ +   C  +Q++  HQ+
Sbjct  53   HQFRSISH-CHLIQKSCH--HQFQSINHCRLIQKSCHHQFLSISQ---CHLIQKSCHHQF  106

Query  706  MNLSHQSHQFMNLSHQSH  759
             ++SH  H   + + + H
Sbjct  107  RSISHSHHSTRSHARRFH  124


 Score = 49.7 bits (117),  Expect = 2e-05
 Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
 Frame = +1

Query  562  HQFMSLSHQSHQYMNLSHQFMNLSHQS-------HQFMSLQRSLRCMSLQRN--HQYMNL  714
            HQF S+SH      +  HQF +++H         HQF S+     C  +Q++  HQ+ ++
Sbjct  2    HQFQSISHCHLIQKSCHHQFRSINHCHLIQKSCHHQFRSINH---CHLIQKSCHHQFRSI  58

Query  715  SHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQ  894
            SH  H      H   Q +N  R   ++ +HQ++S+ +        H  HQ+ ++SH +  
Sbjct  59   SH-CHLIQKSCHHQFQSINHCRLIQKSCHHQFLSISQCHLIQKSCH--HQFRSISHSHHS  115

Query  895  FMNLRRK  915
              +  R+
Sbjct  116  TRSHARR  122


 Score = 32.0 bits (71),  Expect = 5.3
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 20/99 (20%)
 Frame = +1

Query  292  NHQFMNLPRNHRCMSLQRN--RQFMNLS----LQS---HQFMSLSHQSHQFMSLQRNHQY  444
            +HQF ++  NH C  +Q++   QF+++S    +Q    HQF S+SH  H   S  R   +
Sbjct  69   HHQFQSI--NH-CRLIQKSCHHQFLSISQCHLIQKSCHHQFRSISHSHHSTRSHARRFHF  125

Query  445  MNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQS  561
            ++  L    P  Q +S+  S  C+ +       NLS QS
Sbjct  126  LSFLLTP--PFLQNISIIPSYPCLLIH------NLSVQS  156


>gi|114205376|gb|AAD23383.3|AF108140_1  gamete-specific homeodomain protein GSP1 [Chlamydomonas reinhardtii]
 gi|114205378|gb|AAL14119.3|  gamete-specific homeodomain protein [Chlamydomonas reinhardtii]
Length=1035

 Score = 49.3 bits (116),  Expect = 3e-05
 Identities = 43/168 (25%), Positives = 64/168 (38%), Gaps = 15/168 (8%)
 Frame = +1

Query  379  HQFMSLSHQSHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQ  558
            HQ     HQ +Q    Q+ H +        +P   + +    L   +  ++RQ     HQ
Sbjct  180  HQPQHPHHQQYQ----QQQHVHHQQHPLMPDPYTSFAAGPIDLAAHAHMQHRQ----QHQ  231

Query  559  SHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLS------H  720
              Q   L +  HQ+    HQ  +L  Q  Q+      L    +Q  HQ+  L       H
Sbjct  232  QEQQQML-YAYHQHNQYHHQQQHLQPQHQQYQQYPPQLPHQQVQHQHQHTALGSPPVQHH  290

Query  721  QSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQ  864
            Q HQ     HQ HQ  +    +   P   + +  R L   + SHQ+HQ
Sbjct  291  QHHQHHQHHHQHHQHHHQHHHQQHVPAGAHHAAARPLPPNHQSHQHHQ  338


 Score = 41.6 bits (96),  Expect = 0.007
 Identities = 39/134 (29%), Positives = 49/134 (36%), Gaps = 20/134 (14%)
 Frame = +1

Query  358  MNLSLQSHQFMSLSHQSHQFMSLQRNHQYMNLSLQSQN--PNHQ-YMSLQRSLRCMSLQR  528
            ++L+  +H      HQ  Q   L   HQ+     Q Q+  P HQ Y      L    +Q 
Sbjct  216  IDLAAHAHMQHRQQHQQEQQQMLYAYHQHNQYHHQQQHLQPQHQQYQQYPPQLPHQQVQH  275

Query  529  NRQFMNLS------HQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQ  690
              Q   L       HQ HQ     HQ HQ+ +  H      HQ H       +     L 
Sbjct  276  QHQHTALGSPPVQHHQHHQHHQHHHQHHQHHHQHH------HQQHVPAGAHHA-AARPLP  328

Query  691  RNHQYMNLSHQSHQ  732
             NHQ    SHQ HQ
Sbjct  329  PNHQ----SHQHHQ  338


 Score = 33.9 bits (76),  Expect = 1.4
 Identities = 43/196 (21%), Positives = 66/196 (33%), Gaps = 23/196 (11%)
 Frame = +1

Query  133  PR*SHPQFTNHHQFTNLQRSQNP-NPLSMNPQrrrsrspshrFTNLQRRKSQNPNHQFMN  309
            P    PQ  +H Q+   Q   +  +PL  +P           +T+          H  M 
Sbjct  177  PHYHQPQHPHHQQYQQQQHVHHQQHPLMPDP-----------YTSFAAGPIDLAAHAHMQ  225

Query  310  LPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYMNLSLQSQNPNHQYM  489
                HR    Q  +Q +    Q +Q+    HQ        + +Q     L  Q   HQ+ 
Sbjct  226  ----HRQQHQQEQQQMLYAYHQHNQY---HHQQQHLQPQHQQYQQYPPQLPHQQVQHQHQ  278

Query  490  SLQRSLRCMSLQRNRQFMNLSHQSHQF-MSLSHQSHQYMNLSH---QFMNLSHQSHQFMS  657
                    +   ++ Q     HQ HQ      HQ H      H   + +  +HQSHQ   
Sbjct  279  HTALGSPPVQHHQHHQHHQHHHQHHQHHHQHHHQQHVPAGAHHAAARPLPPNHQSHQHHQ  338

Query  658  LQRSLRCMSLQRNHQY  705
             Q      S  ++HQ+
Sbjct  339  QQMPPVVPSQPQHHQH  354


 Score = 33.1 bits (74),  Expect = 2.4
 Identities = 42/193 (21%), Positives = 69/193 (35%), Gaps = 34/193 (17%)
 Frame = +1

Query  373  QSHQFM---SLSHQSHQFMSLQRNH--QYMNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQ  537
            Q HQ +   ++ H  HQ  +    H   Y     Q Q+P+HQ    Q+            
Sbjct  151  QQHQHVVPAAVGHSHHQAATAAAAHAPHYH----QPQHPHHQQYQQQQ------------  194

Query  538  FMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLS  717
              ++ HQ H  M        Y + +   ++L+  +H     Q       +   +   N  
Sbjct  195  --HVHHQQHPLMP-----DPYTSFAAGPIDLAAHAHMQHRQQHQQEQQQMLYAYHQHNQY  247

Query  718  HQSHQFMNLSHQSHQFMNLQRKRSQ-NPNHQYMSL-QRSLQCMNLSHQNHQYMNLSHQNR  891
            H   Q +   HQ +Q    Q    Q    HQ+ +L    +Q     HQ+HQ+    HQ+ 
Sbjct  248  HHQQQHLQPQHQQYQQYPPQLPHQQVQHQHQHTALGSPPVQ----HHQHHQHHQHHHQHH  303

Query  892  QFMNLRRKRSQSP  930
            Q  +    +   P
Sbjct  304  QHHHQHHHQQHVP  316


>gi|18394483|ref|NP_564023.1|  transcription initiation factor [Arabidopsis thaliana]
 gi|30685323|ref|NP_849680.1|  transcription initiation factor [Arabidopsis thaliana]
 gi|15810159|gb|AAL07223.1|  unknown protein [Arabidopsis thaliana]
 gi|20259253|gb|AAM14362.1|  unknown protein [Arabidopsis thaliana]
 gi|39545906|gb|AAR28016.1|  TAF12b [Arabidopsis thaliana]
Length=683

 Score = 48.5 bits (114),  Expect = 5e-05
 Identities = 49/176 (27%), Positives = 68/176 (38%), Gaps = 18/176 (10%)
 Frame = +1

Query  406  SHQFMSLQRNHQ--YMNLSLQSQNPNHQYMSLQRSL------RCMSLQRNRQFMNLSHQS  561
            S Q  +LQR     +MN  L     N Q   +Q SL      + MS   +     L    
Sbjct  332  SPQVQNLQRTSSLAFMNPQLSGLAQNGQAGMMQNSLSQQQWLKQMSGITSPNSFRLQPSQ  391

Query  562  HQFMSLSHQSHQYMNLSHQFMNLSHQSHQF-MSLQRSLRCMSLQRNHQYMNLSHQSHQFM  738
             Q + L  Q  Q   LS      S Q HQ  MSL +      +Q+  Q   L       M
Sbjct  392  RQALLLQQQQQQQQQLS------SPQLHQSSMSLNQQQISQIIQQQQQQSQLGQSQ---M  442

Query  739  NLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQFMNL  906
            N SH   Q   +Q++  Q P  Q    Q+  Q M ++ Q      LSH  ++ ++L
Sbjct  443  NQSHSQQQLQQMQQQLQQQPQQQMQQQQQQQQQMQINQQQPSPRMLSHAGQKSVSL  498


 Score = 34.3 bits (77),  Expect = 1.1
 Identities = 45/189 (23%), Positives = 73/189 (38%), Gaps = 18/189 (9%)
 Frame = +1

Query  460   QSQNPNH--QYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLSH--QSHQYMNLSHQFMN  627
             Q  NP    Q +S Q +L    +Q  ++  +L+  + Q   L+   Q+    N   Q   
Sbjct  313   QRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNGQAGMMQNSLSQQQW  372

Query  628   LSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQ  807
             L   S   ++   S R    QR    +    Q  Q ++ S Q HQ        S + N Q
Sbjct  373   LKQMSG--ITSPNSFRLQPSQRQALLLQQQQQQQQQLS-SPQLHQ-------SSMSLNQQ  422

Query  808   YMSLQRSLQCMNLSHQNHQYMNLSHQNRQFMNLRRKRSQSPNHRFTNLRRSHQYMNLLRN  987
              +S Q   Q    S      MN SH  +Q   ++++  Q P  +    ++  Q M + + 
Sbjct  423   QIS-QIIQQQQQQSQLGQSQMNQSHSQQQLQQMQQQLQQQPQQQMQQQQQQQQQMQINQQ  481

Query  988   H---RCMSH  1005
                 R +SH
Sbjct  482   QPSPRMLSH  490


>gi|8778478|gb|AAF79486.1|AC022492_30  F1L3.13 [Arabidopsis thaliana]
Length=734

 Score = 48.5 bits (114),  Expect = 5e-05
 Identities = 49/176 (27%), Positives = 68/176 (38%), Gaps = 18/176 (10%)
 Frame = +1

Query  406  SHQFMSLQRNHQ--YMNLSLQSQNPNHQYMSLQRSL------RCMSLQRNRQFMNLSHQS  561
            S Q  +LQR     +MN  L     N Q   +Q SL      + MS   +     L    
Sbjct  329  SPQVQNLQRTSSLAFMNPQLSGLAQNGQAGMMQNSLSQQQWLKQMSGITSPNSFRLQPSQ  388

Query  562  HQFMSLSHQSHQYMNLSHQFMNLSHQSHQF-MSLQRSLRCMSLQRNHQYMNLSHQSHQFM  738
             Q + L  Q  Q   LS      S Q HQ  MSL +      +Q+  Q   L       M
Sbjct  389  RQALLLQQQQQQQQQLS------SPQLHQSSMSLNQQQISQIIQQQQQQSQLGQSQ---M  439

Query  739  NLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQFMNL  906
            N SH   Q   +Q++  Q P  Q    Q+  Q M ++ Q      LSH  ++ ++L
Sbjct  440  NQSHSQQQLQQMQQQLQQQPQQQMQQQQQQQQQMQINQQQPSPRMLSHAGQKSVSL  495


 Score = 34.3 bits (77),  Expect = 1.1
 Identities = 45/189 (23%), Positives = 73/189 (38%), Gaps = 18/189 (9%)
 Frame = +1

Query  460   QSQNPNH--QYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLSH--QSHQYMNLSHQFMN  627
             Q  NP    Q +S Q +L    +Q  ++  +L+  + Q   L+   Q+    N   Q   
Sbjct  310   QRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNGQAGMMQNSLSQQQW  369

Query  628   LSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQ  807
             L   S   ++   S R    QR    +    Q  Q ++ S Q HQ        S + N Q
Sbjct  370   LKQMSG--ITSPNSFRLQPSQRQALLLQQQQQQQQQLS-SPQLHQ-------SSMSLNQQ  419

Query  808   YMSLQRSLQCMNLSHQNHQYMNLSHQNRQFMNLRRKRSQSPNHRFTNLRRSHQYMNLLRN  987
              +S Q   Q    S      MN SH  +Q   ++++  Q P  +    ++  Q M + + 
Sbjct  420   QIS-QIIQQQQQQSQLGQSQMNQSHSQQQLQQMQQQLQQQPQQQMQQQQQQQQQMQINQQ  478

Query  988   H---RCMSH  1005
                 R +SH
Sbjct  479   QPSPRMLSH  487


>gi|9665128|gb|AAF97312.1|AC007843_15  Unknown protein [Arabidopsis thaliana]
Length=674

 Score = 48.5 bits (114),  Expect = 5e-05
 Identities = 49/176 (27%), Positives = 68/176 (38%), Gaps = 18/176 (10%)
 Frame = +1

Query  406  SHQFMSLQRNHQ--YMNLSLQSQNPNHQYMSLQRSL------RCMSLQRNRQFMNLSHQS  561
            S Q  +LQR     +MN  L     N Q   +Q SL      + MS   +     L    
Sbjct  332  SPQVQNLQRTSSLAFMNPQLSGLAQNGQAGMMQNSLSQQQWLKQMSGITSPNSFRLQPSQ  391

Query  562  HQFMSLSHQSHQYMNLSHQFMNLSHQSHQF-MSLQRSLRCMSLQRNHQYMNLSHQSHQFM  738
             Q + L  Q  Q   LS      S Q HQ  MSL +      +Q+  Q   L       M
Sbjct  392  RQALLLQQQQQQQQQLS------SPQLHQSSMSLNQQQISQIIQQQQQQSQLGQSQ---M  442

Query  739  NLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQFMNL  906
            N SH   Q   +Q++  Q P  Q    Q+  Q M ++ Q      LSH  ++ ++L
Sbjct  443  NQSHSQQQLQQMQQQLQQQPQQQMQQQQQQQQQMQINQQQPSPRMLSHAGQKSVSL  498


 Score = 34.3 bits (77),  Expect = 1.1
 Identities = 45/189 (23%), Positives = 73/189 (38%), Gaps = 18/189 (9%)
 Frame = +1

Query  460   QSQNPNH--QYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLSH--QSHQYMNLSHQFMN  627
             Q  NP    Q +S Q +L    +Q  ++  +L+  + Q   L+   Q+    N   Q   
Sbjct  313   QRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNGQAGMMQNSLSQQQW  372

Query  628   LSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQ  807
             L   S   ++   S R    QR    +    Q  Q ++ S Q HQ        S + N Q
Sbjct  373   LKQMSG--ITSPNSFRLQPSQRQALLLQQQQQQQQQLS-SPQLHQ-------SSMSLNQQ  422

Query  808   YMSLQRSLQCMNLSHQNHQYMNLSHQNRQFMNLRRKRSQSPNHRFTNLRRSHQYMNLLRN  987
              +S Q   Q    S      MN SH  +Q   ++++  Q P  +    ++  Q M + + 
Sbjct  423   QIS-QIIQQQQQQSQLGQSQMNQSHSQQQLQQMQQQLQQQPQQQMQQQQQQQQQMQINQQ  481

Query  988   H---RCMSH  1005
                 R +SH
Sbjct  482   QPSPRMLSH  490


>gi|19310546|gb|AAL85006.1|  unknown protein [Arabidopsis thaliana]
Length=1045

 Score = 45.1 bits (105),  Expect = 6e-04
 Identities = 57/251 (22%), Positives = 90/251 (35%), Gaps = 30/251 (11%)
 Frame = +1

Query  259   TNLQRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNH  438
             +NLQ  K QN       LP+    +S Q+        LQ     SL+HQ  Q  S Q+  
Sbjct  357   SNLQFNK-QNQQAPMSQLPQPPTTLSQQQ-------QLQQLLHSSLNHQQQQSQSQQQQQ  408

Query  439   QYMNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQ  618
             Q   L  Q Q  + Q+ +                 N S    Q   L  Q  Q +   HQ
Sbjct  409   QQQLLQQQQQLQSQQHSN----------------NNQSQSQQQQQLLQQQQQQQLQQQHQ  452

Query  619   FMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNP  798
                   Q  Q  + Q+ LR   LQ +        Q H+   L    +Q  N Q+   Q+ 
Sbjct  453   ------QPLQQQTQQQQLRTQPLQSHSHPQPQQLQQHKLQQLQVPQNQLYNGQQAAQQHQ  506

Query  799   NHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQFMNLRRKRSQSPNHRFTNLRRSHQYMNL  978
             + Q  +     Q ++ S  +      S    Q    ++++S+       +L  S    ++
Sbjct  507   SQQASTHHLQPQLVSGSMASSVITPPSSSLNQSFQQQQQQSKQLQQAHHHLGASTSQSSV  566

Query  979   LRNHRCMSHLM  1011
             +   +  S+LM
Sbjct  567   IETSKSSSNLM  577


 Score = 38.1 bits (87),  Expect = 0.074
 Identities = 40/204 (19%), Positives = 74/204 (36%), Gaps = 13/204 (6%)
 Frame = +1

Query  343  RNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSL  522
            +  +   L +  +Q  +    + Q  S Q +  ++   L S +     ++   S    S 
Sbjct  481  QQHKLQQLQVPQNQLYNGQQAAQQHQSQQASTHHLQPQLVSGSMASSVITPPSSSLNQSF  540

Query  523  QRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQ  702
            Q+ +Q      Q+H  +  S      +  S    NL     Q     R +     Q+   
Sbjct  541  QQQQQQSKQLQQAHHHLGASTSQSSVIETSKSSSNLMSAPPQETQFSRQVE----QQQPP  596

Query  703  YMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMN---  873
             +N  +Q       +HQ+      Q+   + P+ Q+  LQR  Q      Q  Q+++   
Sbjct  597  GLNGQNQQTLLQQKAHQAQAQQIFQQSLLEQPHIQFQLLQRLQQ-----QQQQQFLSPQS  651

Query  874  -LSHQNRQFMNLRRKRSQSPNHRF  942
             L H   Q   L++  + S  H+F
Sbjct  652  QLPHHQLQSQQLQQLPTLSQGHQF  675


>gi|4103243|gb|AAD04807.1|  BIPOSTO [Arabidopsis thaliana]
Length=1165

 Score = 45.1 bits (105),  Expect = 6e-04
 Identities = 57/251 (22%), Positives = 90/251 (35%), Gaps = 30/251 (11%)
 Frame = +1

Query  259   TNLQRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNH  438
             +NLQ  K QN       LP+    +S Q+        LQ     SL+HQ  Q  S Q+  
Sbjct  477   SNLQFNK-QNQQAPMSQLPQPPTTLSQQQ-------QLQQLLHSSLNHQQQQSQSQQQQQ  528

Query  439   QYMNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQ  618
             Q   L  Q Q  + Q+ +                 N S    Q   L  Q  Q +   HQ
Sbjct  529   QQQLLQQQQQLQSQQHSN----------------NNQSQSQQQQQLLQQQQQQQLQQQHQ  572

Query  619   FMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNP  798
                   Q  Q  + Q+ LR   LQ +        Q H+   L    +Q  N Q+   Q+ 
Sbjct  573   ------QPLQQQTQQQQLRTQPLQSHSHPQPQQLQQHKLQQLQVPQNQLYNGQQAAQQHQ  626

Query  799   NHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQFMNLRRKRSQSPNHRFTNLRRSHQYMNL  978
             + Q  +     Q ++ S  +      S    Q    ++++S+       +L  S    ++
Sbjct  627   SQQASTHHLQPQLVSGSMASSVITPPSSSLNQSFQQQQQQSKQLQQAHHHLGASTSQSSV  686

Query  979   LRNHRCMSHLM  1011
             +   +  S+LM
Sbjct  687   IETSKSSSNLM  697


 Score = 38.1 bits (87),  Expect = 0.074
 Identities = 40/204 (19%), Positives = 74/204 (36%), Gaps = 13/204 (6%)
 Frame = +1

Query  343  RNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSL  522
            +  +   L +  +Q  +    + Q  S Q +  ++   L S +     ++   S    S 
Sbjct  601  QQHKLQQLQVPQNQLYNGQQAAQQHQSQQASTHHLQPQLVSGSMASSVITPPSSSLNQSF  660

Query  523  QRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQ  702
            Q+ +Q      Q+H  +  S      +  S    NL     Q     R +     Q+   
Sbjct  661  QQQQQQSKQLQQAHHHLGASTSQSSVIETSKSSSNLMSAPPQETQFSRQVE----QQQPP  716

Query  703  YMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMN---  873
             +N  +Q       +HQ+      Q+   + P+ Q+  LQR  Q      Q  Q+++   
Sbjct  717  GLNGQNQQTLLQQKAHQAQAQQIFQQSLLEQPHIQFQLLQRLQQ-----QQQQQFLSPQS  771

Query  874  -LSHQNRQFMNLRRKRSQSPNHRF  942
             L H   Q   L++  + S  H+F
Sbjct  772  QLPHHQLQSQQLQQLPTLSQGHQF  795


>gi|30687957|ref|NP_568400.2|  NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); transcription factor [Arabidopsis 
thaliana]
Length=1150

 Score = 45.1 bits (105),  Expect = 6e-04
 Identities = 57/251 (22%), Positives = 90/251 (35%), Gaps = 30/251 (11%)
 Frame = +1

Query  259   TNLQRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNH  438
             +NLQ  K QN       LP+    +S Q+        LQ     SL+HQ  Q  S Q+  
Sbjct  477   SNLQFNK-QNQQAPMSQLPQPPTTLSQQQ-------QLQQLLHSSLNHQQQQSQSQQQQQ  528

Query  439   QYMNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQ  618
             Q   L  Q Q  + Q+ +                 N S    Q   L  Q  Q +   HQ
Sbjct  529   QQQLLQQQQQLQSQQHSN----------------NNQSQSQQQQQLLQQQQQQQLQQQHQ  572

Query  619   FMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNP  798
                   Q  Q  + Q+ LR   LQ +        Q H+   L    +Q  N Q+   Q+ 
Sbjct  573   ------QPLQQQTQQQQLRTQPLQSHSHPQPQQLQQHKLQQLQVPQNQLYNGQQAAQQHQ  626

Query  799   NHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQFMNLRRKRSQSPNHRFTNLRRSHQYMNL  978
             + Q  +     Q ++ S  +      S    Q    ++++S+       +L  S    ++
Sbjct  627   SQQASTHHLQPQLVSGSMASSVITPPSSSLNQSFQQQQQQSKQLQQAHHHLGASTSQSSV  686

Query  979   LRNHRCMSHLM  1011
             +   +  S+LM
Sbjct  687   IETSKSSSNLM  697


 Score = 38.1 bits (87),  Expect = 0.074
 Identities = 40/204 (19%), Positives = 74/204 (36%), Gaps = 13/204 (6%)
 Frame = +1

Query  343  RNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSL  522
            +  +   L +  +Q  +    + Q  S Q +  ++   L S +     ++   S    S 
Sbjct  601  QQHKLQQLQVPQNQLYNGQQAAQQHQSQQASTHHLQPQLVSGSMASSVITPPSSSLNQSF  660

Query  523  QRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQ  702
            Q+ +Q      Q+H  +  S      +  S    NL     Q     R +     Q+   
Sbjct  661  QQQQQQSKQLQQAHHHLGASTSQSSVIETSKSSSNLMSAPPQETQFSRQVE----QQQPP  716

Query  703  YMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMN---  873
             +N  +Q       +HQ+      Q+   + P+ Q+  LQR  Q      Q  Q+++   
Sbjct  717  GLNGQNQQTLLQQKAHQAQAQQIFQQSLLEQPHIQFQLLQRLQQ-----QQQQQFLSPQS  771

Query  874  -LSHQNRQFMNLRRKRSQSPNHRF  942
             L H   Q   L++  + S  H+F
Sbjct  772  QLPHHQLQSQQLQQLPTLSQGHQF  795


>gi|30687943|ref|NP_851046.1|  NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); transcription factor [Arabidopsis 
thaliana]
 gi|8071650|gb|AAF71831.1|AF186466_1  non-phototropic hypocotyl 4 [Arabidopsis thaliana]
Length=1165

 Score = 45.1 bits (105),  Expect = 6e-04
 Identities = 57/251 (22%), Positives = 90/251 (35%), Gaps = 30/251 (11%)
 Frame = +1

Query  259   TNLQRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNH  438
             +NLQ  K QN       LP+    +S Q+        LQ     SL+HQ  Q  S Q+  
Sbjct  477   SNLQFNK-QNQQAPMSQLPQPPTTLSQQQ-------QLQQLLHSSLNHQQQQSQSQQQQQ  528

Query  439   QYMNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQ  618
             Q   L  Q Q  + Q+ +                 N S    Q   L  Q  Q +   HQ
Sbjct  529   QQQLLQQQQQLQSQQHSN----------------NNQSQSQQQQQLLQQQQQQQLQQQHQ  572

Query  619   FMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNP  798
                   Q  Q  + Q+ LR   LQ +        Q H+   L    +Q  N Q+   Q+ 
Sbjct  573   ------QPLQQQTQQQQLRTQPLQSHSHPQPQQLQQHKLQQLQVPQNQLYNGQQAAQQHQ  626

Query  799   NHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQFMNLRRKRSQSPNHRFTNLRRSHQYMNL  978
             + Q  +     Q ++ S  +      S    Q    ++++S+       +L  S    ++
Sbjct  627   SQQASTHHLQPQLVSGSMASSVITPPSSSLNQSFQQQQQQSKQLQQAHHHLGASTSQSSV  686

Query  979   LRNHRCMSHLM  1011
             +   +  S+LM
Sbjct  687   IETSKSSSNLM  697


 Score = 38.1 bits (87),  Expect = 0.074
 Identities = 40/204 (19%), Positives = 74/204 (36%), Gaps = 13/204 (6%)
 Frame = +1

Query  343  RNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSL  522
            +  +   L +  +Q  +    + Q  S Q +  ++   L S +     ++   S    S 
Sbjct  601  QQHKLQQLQVPQNQLYNGQQAAQQHQSQQASTHHLQPQLVSGSMASSVITPPSSSLNQSF  660

Query  523  QRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQ  702
            Q+ +Q      Q+H  +  S      +  S    NL     Q     R +     Q+   
Sbjct  661  QQQQQQSKQLQQAHHHLGASTSQSSVIETSKSSSNLMSAPPQETQFSRQVE----QQQPP  716

Query  703  YMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMN---  873
             +N  +Q       +HQ+      Q+   + P+ Q+  LQR  Q      Q  Q+++   
Sbjct  717  GLNGQNQQTLLQQKAHQAQAQQIFQQSLLEQPHIQFQLLQRLQQ-----QQQQQFLSPQS  771

Query  874  -LSHQNRQFMNLRRKRSQSPNHRF  942
             L H   Q   L++  + S  H+F
Sbjct  772  QLPHHQLQSQQLQQLPTLSQGHQF  795


>gi|30687949|ref|NP_851047.1|  NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); transcription factor [Arabidopsis 
thaliana]
 gi|46576377|sp|P93022|ARFG_ARATH  Auxin response factor 7 (Non-phototropic hypocotyl 4) (Protein 
BIPOSTO) (Auxin-responsive protein IAA21/IAA23/IAA25)
 gi|37540157|gb|AAG35177.1|  ARF7 [Arabidopsis thaliana]
 gi|49616353|gb|AAT67073.1|  ARF7 [Arabidopsis thaliana]
Length=1164

 Score = 45.1 bits (105),  Expect = 6e-04
 Identities = 57/251 (22%), Positives = 90/251 (35%), Gaps = 30/251 (11%)
 Frame = +1

Query  259   TNLQRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNH  438
             +NLQ  K QN       LP+    +S Q+        LQ     SL+HQ  Q  S Q+  
Sbjct  476   SNLQFNK-QNQQAPMSQLPQPPTTLSQQQ-------QLQQLLHSSLNHQQQQSQSQQQQQ  527

Query  439   QYMNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQ  618
             Q   L  Q Q  + Q+ +                 N S    Q   L  Q  Q +   HQ
Sbjct  528   QQQLLQQQQQLQSQQHSN----------------NNQSQSQQQQQLLQQQQQQQLQQQHQ  571

Query  619   FMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNP  798
                   Q  Q  + Q+ LR   LQ +        Q H+   L    +Q  N Q+   Q+ 
Sbjct  572   ------QPLQQQTQQQQLRTQPLQSHSHPQPQQLQQHKLQQLQVPQNQLYNGQQAAQQHQ  625

Query  799   NHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQFMNLRRKRSQSPNHRFTNLRRSHQYMNL  978
             + Q  +     Q ++ S  +      S    Q    ++++S+       +L  S    ++
Sbjct  626   SQQASTHHLQPQLVSGSMASSVITPPSSSLNQSFQQQQQQSKQLQQAHHHLGASTSQSSV  685

Query  979   LRNHRCMSHLM  1011
             +   +  S+LM
Sbjct  686   IETSKSSSNLM  696


 Score = 38.1 bits (87),  Expect = 0.074
 Identities = 40/204 (19%), Positives = 74/204 (36%), Gaps = 13/204 (6%)
 Frame = +1

Query  343  RNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSL  522
            +  +   L +  +Q  +    + Q  S Q +  ++   L S +     ++   S    S 
Sbjct  600  QQHKLQQLQVPQNQLYNGQQAAQQHQSQQASTHHLQPQLVSGSMASSVITPPSSSLNQSF  659

Query  523  QRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQ  702
            Q+ +Q      Q+H  +  S      +  S    NL     Q     R +     Q+   
Sbjct  660  QQQQQQSKQLQQAHHHLGASTSQSSVIETSKSSSNLMSAPPQETQFSRQVE----QQQPP  715

Query  703  YMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMN---  873
             +N  +Q       +HQ+      Q+   + P+ Q+  LQR  Q      Q  Q+++   
Sbjct  716  GLNGQNQQTLLQQKAHQAQAQQIFQQSLLEQPHIQFQLLQRLQQ-----QQQQQFLSPQS  770

Query  874  -LSHQNRQFMNLRRKRSQSPNHRF  942
             L H   Q   L++  + S  H+F
Sbjct  771  QLPHHQLQSQQLQQLPTLSQGHQF  794


>gi|15238073|ref|NP_198957.1|  BEL1 (BELL 1); DNA binding / transcription factor [Arabidopsis 
thaliana]
 gi|9758050|dbj|BAB08513.1|  homeotic protein BEL1 homolog [Arabidopsis thaliana]
 gi|15146193|gb|AAK83580.1|  AT5g41410/MYC6_12 [Arabidopsis thaliana]
 gi|27363268|gb|AAO11553.1|  At5g41410/MYC6_12 [Arabidopsis thaliana]
 gi|28202125|gb|AAB05099.2|  homeobox protein [Arabidopsis thaliana]
Length=611

 Score = 45.1 bits (105),  Expect = 6e-04
 Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 19/200 (9%)
 Frame = +1

Query  382  QFMSLSHQSHQFMSLQRNHQYMNLSLQSQNP------NHQYMSLQRSLRCMSLQRNRQFM  543
            QF   ++  HQ    Q  +Q       +QNP      NHQ      ++  M     +Q +
Sbjct  5    QFYGHNNHHHQEQQHQMINQIQGFDETNQNPTDHHHYNHQIFGSNSNMGMMIDFSKQQQI  64

Query  544  NLS-----HQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYM  708
             ++     H  H   S     +Q +  S   M L + ++ F S     R    QR  Q +
Sbjct  65   RMTSGSDHHHHHHQTSGGTDQNQLLEDSSSAMRLCNVNNDFPSEVNDER--PPQRPSQGL  122

Query  709  NLSHQSHQFMNLSHQSHQFMNLQRKR---SQNPNHQYMSLQRS---LQCMNLSHQNHQYM  870
            +LS  S    ++S QS +    Q+++   S N + Q+ +LQ +   +  MN  HQN+   
Sbjct  123  SLSLSSSNPTSISLQSFELRPQQQQQQGYSGNKSTQHQNLQHTQMMMMMMNSHHQNNNNN  182

Query  871  NLSHQNRQFMNLRRKRSQSP  930
            N  H N     +   +  SP
Sbjct  183  NHQHHNHHQFQIGSSKYLSP  202


>gi|8927657|gb|AAF82148.1|AC034256_12  EST gb|N38213 comes from this gene. [Arabidopsis thaliana]
Length=1366

 Score = 44.3 bits (103),  Expect = 0.001
 Identities = 74/315 (23%), Positives = 114/315 (36%), Gaps = 43/315 (13%)
 Frame = +1

Query  61   SPLPPLVPTSYPAMGNHLLLFTNLPR*SHPQFTNHHQFTNLQRSQNPNPLSMNPQrrrsr  240
            S   P    S P  G H    TN    S PQ ++     ++ R    + L  +PQ +++ 
Sbjct  312  SATQPSTVNSAPLQGLH----TNQQ--SSPQLSSQQTTQSMLRQHQSSMLRQHPQSQQA-  364

Query  241  spshrFTNLQRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLS-----HQ  405
                  + + +++S  P       P   +   L R +   +  +Q  Q M         Q
Sbjct  365  ------SGIHQQQSSLPQQSIS--PLQQQPTQLMRQQAANSSGIQQKQMMGQHVVGDMQQ  416

Query  406  SHQFMSLQRNHQYMNLSLQS--QNPNHQYMSLQRSL-----RCMSLQRNRQFMNLSHQSH  564
             HQ   L + +  MN+  Q   Q P  Q    Q+       + MS Q + Q  + +    
Sbjct  417  QHQQRLLNQQNNVMNIQQQQSQQQPLQQPQQQQKQQPPAQQQLMSQQNSLQATHQNPLGT  476

Query  565  QFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQ-----YMNLSHQS-  726
            Q      Q  Q   L+ Q  N S Q++Q      S   + LQR HQ     Y +   QS 
Sbjct  477  QSNVAGLQQPQQQMLNSQVGNSSLQNNQHSVHMLSQPTVGLQRTHQAGHGLYSSQGQQSQ  536

Query  727  -----HQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCM-NLSHQNHQYMNLSHQN  888
                  Q M      HQ + LQ    Q PN     +Q+ LQ    ++       N+  Q 
Sbjct  537  NQPSQQQMMPQLQSHHQQLGLQ----QQPNLLQQDVQQRLQASGQVTGSLLPPQNVVDQQ  592

Query  889  RQFMNLRRKRSQSPN  933
            RQ    +R   + P+
Sbjct  593  RQLYQSQRTLPEMPS  607


 Score = 32.3 bits (72),  Expect = 4.1
 Identities = 58/269 (21%), Positives = 99/269 (36%), Gaps = 45/269 (16%)
 Frame = +1

Query  307  NLPRNHRCMSLQRNRQFMNLSLQSHQFMSLS-------------HQSHQFMSLQRNHQYM  447
            ++P+  R   L++ RQF  +  +  QF+S+S             +   Q +     H+  
Sbjct  658  SMPQQQRSDQLEKLRQFKTMLERMIQFLSVSKSNIMPALKDKVAYYEKQIIGFLNMHRPR  717

Query  448  NLSLQSQNPNHQYMSLQR-----------------SLRCMSLQ----RNRQFMNLSHQSH  564
                Q Q P  Q   +Q+                  ++ MS+Q    R +Q    + QS+
Sbjct  718  KPVQQGQLPQSQMQPMQQPQSQTVQDQSHDNQTNPQMQSMSMQGAGPRAQQSSMTNMQSN  777

Query  565  QFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQ--RSLRCMSLQRN-HQYMNLSHQSHQF  735
               S    S    N+       S +S Q  +L   + +   S+Q+N  Q +N S  S Q 
Sbjct  778  VLSSRPGVSAPQQNIPSSIPASSLESGQGNTLNNGQQVAMGSMQQNTSQLVNNSSASAQS  837

Query  736  ------MNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQF  897
                   N++        LQ +  +    Q M L++  Q   +  Q  Q      Q +Q 
Sbjct  838  GLSTLQSNVNQPQLSSSLLQHQHLKQQQDQQMQLKQQFQQRQM--QQQQLQARQQQQQQQ  895

Query  898  MNLRRKRSQSPNHRFTNLRRSHQYMNLLR  984
            +  R++ +Q       N   S Q MN+ R
Sbjct  896  LQARQQAAQLQQMNDMNDLTSRQGMNVSR  924


>gi|15218294|ref|NP_173030.1|  unknown protein [Arabidopsis thaliana]
Length=1335

 Score = 44.3 bits (103),  Expect = 0.001
 Identities = 74/315 (23%), Positives = 114/315 (36%), Gaps = 43/315 (13%)
 Frame = +1

Query  61   SPLPPLVPTSYPAMGNHLLLFTNLPR*SHPQFTNHHQFTNLQRSQNPNPLSMNPQrrrsr  240
            S   P    S P  G H    TN    S PQ ++     ++ R    + L  +PQ +++ 
Sbjct  281  SATQPSTVNSAPLQGLH----TNQQ--SSPQLSSQQTTQSMLRQHQSSMLRQHPQSQQA-  333

Query  241  spshrFTNLQRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLS-----HQ  405
                  + + +++S  P       P   +   L R +   +  +Q  Q M         Q
Sbjct  334  ------SGIHQQQSSLPQQSIS--PLQQQPTQLMRQQAANSSGIQQKQMMGQHVVGDMQQ  385

Query  406  SHQFMSLQRNHQYMNLSLQS--QNPNHQYMSLQRSL-----RCMSLQRNRQFMNLSHQSH  564
             HQ   L + +  MN+  Q   Q P  Q    Q+       + MS Q + Q  + +    
Sbjct  386  QHQQRLLNQQNNVMNIQQQQSQQQPLQQPQQQQKQQPPAQQQLMSQQNSLQATHQNPLGT  445

Query  565  QFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQ-----YMNLSHQS-  726
            Q      Q  Q   L+ Q  N S Q++Q      S   + LQR HQ     Y +   QS 
Sbjct  446  QSNVAGLQQPQQQMLNSQVGNSSLQNNQHSVHMLSQPTVGLQRTHQAGHGLYSSQGQQSQ  505

Query  727  -----HQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCM-NLSHQNHQYMNLSHQN  888
                  Q M      HQ + LQ    Q PN     +Q+ LQ    ++       N+  Q 
Sbjct  506  NQPSQQQMMPQLQSHHQQLGLQ----QQPNLLQQDVQQRLQASGQVTGSLLPPQNVVDQQ  561

Query  889  RQFMNLRRKRSQSPN  933
            RQ    +R   + P+
Sbjct  562  RQLYQSQRTLPEMPS  576


 Score = 32.3 bits (72),  Expect = 4.1
 Identities = 58/269 (21%), Positives = 99/269 (36%), Gaps = 45/269 (16%)
 Frame = +1

Query  307  NLPRNHRCMSLQRNRQFMNLSLQSHQFMSLS-------------HQSHQFMSLQRNHQYM  447
            ++P+  R   L++ RQF  +  +  QF+S+S             +   Q +     H+  
Sbjct  627  SMPQQQRSDQLEKLRQFKTMLERMIQFLSVSKSNIMPALKDKVAYYEKQIIGFLNMHRPR  686

Query  448  NLSLQSQNPNHQYMSLQR-----------------SLRCMSLQ----RNRQFMNLSHQSH  564
                Q Q P  Q   +Q+                  ++ MS+Q    R +Q    + QS+
Sbjct  687  KPVQQGQLPQSQMQPMQQPQSQTVQDQSHDNQTNPQMQSMSMQGAGPRAQQSSMTNMQSN  746

Query  565  QFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQ--RSLRCMSLQRN-HQYMNLSHQSHQF  735
               S    S    N+       S +S Q  +L   + +   S+Q+N  Q +N S  S Q 
Sbjct  747  VLSSRPGVSAPQQNIPSSIPASSLESGQGNTLNNGQQVAMGSMQQNTSQLVNNSSASAQS  806

Query  736  ------MNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQF  897
                   N++        LQ +  +    Q M L++  Q   +  Q  Q      Q +Q 
Sbjct  807  GLSTLQSNVNQPQLSSSLLQHQHLKQQQDQQMQLKQQFQQRQM--QQQQLQARQQQQQQQ  864

Query  898  MNLRRKRSQSPNHRFTNLRRSHQYMNLLR  984
            +  R++ +Q       N   S Q MN+ R
Sbjct  865  LQARQQAAQLQQMNDMNDLTSRQGMNVSR  893


>gi|110739910|dbj|BAF01860.1|  hypothetical protein [Arabidopsis thaliana]
Length=1081

 Score = 43.9 bits (102),  Expect = 0.001
 Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 18/175 (10%)
 Frame = +1

Query  349  RQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSLQR  528
            +QF N  + SH  +    Q   ++   +  Q   + LQ Q    Q + LQ+  + + LQ+
Sbjct  347  QQFQNRDMLSHSHIGDQAQDLDYLITLQLQQQQKIQLQQQ----QKIQLQQQQK-IQLQQ  401

Query  529  NRQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYM  708
             ++     HQ  Q     HQ HQ + L  Q  + + Q H    LQ         ++H + 
Sbjct  402  QQKMQLQQHQLEQ----EHQLHQKL-LQEQQQSHARQLHYQQILQGQTPDSRFGQSHDFP  456

Query  709  NLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMN---LSHQNHQ  864
              ++     +      HQ MN  +K S +P+  +      L   N   L H+ HQ
Sbjct  457  RSNNVDQMLL-----EHQLMNELQKSSGHPSQNFAPYIEQLAAGNFGQLPHEGHQ  506


 Score = 34.3 bits (77),  Expect = 1.1
 Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 22/176 (12%)
 Frame = +1

Query  502   SLRCMSLQRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCM  681
             SL  ++  R  QF +LS++ +    LS   H       QF N    SH  +  Q      
Sbjct  314   SLDGLASNRMSQFEHLSNRFNLGDQLSSNQHN----QQQFQNRDMLSHSHIGDQA-----  364

Query  682   SLQRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRS-QNPNHQYMSLQRSLQCMNLSHQN  858
                ++  Y+ ++ Q  Q   +  Q  Q + LQ+++  Q    Q M LQ+    +   HQ 
Sbjct  365   ---QDLDYL-ITLQLQQQQKIQLQQQQKIQLQQQQKIQLQQQQKMQLQQHQ--LEQEHQL  418

Query  859   HQYMNLSHQN---RQFMNLRRKRSQSPNHRF---TNLRRSHQYMNLLRNHRCMSHL  1008
             HQ +    Q    RQ    +  + Q+P+ RF    +  RS+    +L  H+ M+ L
Sbjct  419   HQKLLQEQQQSHARQLHYQQILQGQTPDSRFGQSHDFPRSNNVDQMLLEHQLMNEL  474


>gi|15221723|ref|NP_173840.1|  unknown protein [Arabidopsis thaliana]
 gi|2829883|gb|AAC00591.1|  Unknown protein [Arabidopsis thaliana]
Length=1417

 Score = 43.9 bits (102),  Expect = 0.001
 Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 18/175 (10%)
 Frame = +1

Query  349  RQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSLQR  528
            +QF N  + SH  +    Q   ++   +  Q   + LQ Q    Q + LQ+  + + LQ+
Sbjct  683  QQFQNRDMLSHSHIGDQAQDLDYLITLQLQQQQKIQLQQQ----QKIQLQQQQK-IQLQQ  737

Query  529  NRQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYM  708
             ++     HQ  Q     HQ HQ + L  Q  + + Q H    LQ         ++H + 
Sbjct  738  QQKMQLQQHQLEQ----EHQLHQKL-LQEQQQSHARQLHYQQILQGQTPDSRFGQSHDFP  792

Query  709  NLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMN---LSHQNHQ  864
              ++     +      HQ MN  +K S +P+  +      L   N   L H+ HQ
Sbjct  793  RSNNVDQMLL-----EHQLMNELQKSSGHPSQNFAPYIEQLAAGNFGQLPHEGHQ  842


 Score = 34.3 bits (77),  Expect = 1.1
 Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 22/176 (12%)
 Frame = +1

Query  502   SLRCMSLQRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCM  681
             SL  ++  R  QF +LS++ +    LS   H       QF N    SH  +  Q      
Sbjct  650   SLDGLASNRMSQFEHLSNRFNLGDQLSSNQHN----QQQFQNRDMLSHSHIGDQA-----  700

Query  682   SLQRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRS-QNPNHQYMSLQRSLQCMNLSHQN  858
                ++  Y+ ++ Q  Q   +  Q  Q + LQ+++  Q    Q M LQ+    +   HQ 
Sbjct  701   ---QDLDYL-ITLQLQQQQKIQLQQQQKIQLQQQQKIQLQQQQKMQLQQHQ--LEQEHQL  754

Query  859   HQYMNLSHQN---RQFMNLRRKRSQSPNHRF---TNLRRSHQYMNLLRNHRCMSHL  1008
             HQ +    Q    RQ    +  + Q+P+ RF    +  RS+    +L  H+ M+ L
Sbjct  755   HQKLLQEQQQSHARQLHYQQILQGQTPDSRFGQSHDFPRSNNVDQMLLEHQLMNEL  810


>gi|8954059|gb|AAF82232.1|AC069143_8  Contains similarity to a non-phototropic hypocotyl 4 (NPH4) protein 
from Arabidopsis thaliana gb|AF186466
Length=1062

 Score = 43.1 bits (100),  Expect = 0.002
 Identities = 56/255 (21%), Positives = 87/255 (34%), Gaps = 21/255 (8%)
 Frame = +1

Query  262   NLQRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQ  441
             N Q     + N QF N P     +S Q   Q   +  Q  Q        HQ   LQ+  Q
Sbjct  435   NFQSPNLSSANSQF-NKPNTVNHISQQMQAQPAMVKSQQQQQQQQQQHQHQQQQLQQQQQ  493

Query  442   YMNLSLQSQNP---NHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSL-SHQSHQYMN-  606
                   Q Q     N+  +++   + C S  +   F     Q    +   +  +HQ +N 
Sbjct  494   LQMSQQQVQQQGIYNNGTIAVANQVSCQSPNQPTGFSQSQLQQQSMLPTGAKMTHQNINS  553

Query  607   LSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKR  786
             + ++ ++      Q M  Q+ L               H S Q +    +     +LQ+  
Sbjct  554   MGNKGLSQMTSFAQEMQFQQQLEM-------------HNSSQLLRNQQEQSSLHSLQQNL  600

Query  787   SQNPNHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQFMNLRRKRSQSPNHRFTNLRRSHQ  966
             SQNP    M  Q S    +   Q      L  Q +Q        S  P        +SHQ
Sbjct  601   SQNPQQLQMQQQSSKPSPSQQLQLQLLQKLQQQQQQQSIPPVSSSLQPQLSALQQTQSHQ  660

Query  967   YMNLL--RNHRCMSH  1005
                LL  +N + ++H
Sbjct  661   LQQLLSSQNQQPLAH  675


 Score = 32.0 bits (71),  Expect = 5.3
 Identities = 73/330 (22%), Positives = 115/330 (34%), Gaps = 52/330 (15%)
 Frame = +1

Query  73   PLVPTSYPAMGNHLLLFTNLPR*SHPQFTNHHQFTNLQRSQNPNPLSMNPQrrrsrspsh  252
            PL  ++ P + + L  F NLP      F ++   + L   Q+PN  S N Q  +      
Sbjct  403  PLSGSATPQLPSALSSF-NLPN----NFASNDP-SKLLNFQSPNLSSANSQFNKP-----  451

Query  253  rFTNLQRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQR  432
               N     SQ    Q   +    +    Q+  Q     LQ  Q + +S Q  Q   +  
Sbjct  452  ---NTVNHISQQMQAQPAMVKSQQQQQQQQQQHQHQQQQLQQQQQLQMSQQQVQQQGIYN  508

Query  433  NHQYMNLSLQS-QNPNH-----QYMSLQRSLRCMSLQRNRQFMN------LSHQSHQFMS  576
            N      +  S Q+PN      Q    Q+S+     +   Q +N      LS  +     
Sbjct  509  NGTIAVANQVSCQSPNQPTGFSQSQLQQQSMLPTGAKMTHQNINSMGNKGLSQMTSFAQE  568

Query  577  LSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQ--------  732
            +  Q    M+ S Q +    +     SLQ++L      +N Q + +  QS +        
Sbjct  569  MQFQQQLEMHNSSQLLRNQQEQSSLHSLQQNL-----SQNPQQLQMQQQSSKPSPSQQLQ  623

Query  733  ---FMNLSHQSHQ------FMNLQRKRS---QNPNHQYMSLQRSLQCMNLSHQNHQY-MN  873
                  L  Q  Q        +LQ + S   Q  +HQ   L  S     L+H N+ +  +
Sbjct  624  LQLLQKLQQQQQQQSIPPVSSSLQPQLSALQQTQSHQLQQLLSSQNQQPLAHGNNSFPAS  683

Query  874  LSHQNRQFMNLRRKRSQSPNHRFTNLRRSH  963
               Q  Q     +++ Q  N       RSH
Sbjct  684  TFMQPPQIQVSPQQQGQMSNKNLVAAGRSH  713


>gi|15221978|ref|NP_173356.1|  ARF19; transcription factor [Arabidopsis thaliana]
 gi|46576613|sp|Q8RYC8|ARFS_ARATH  Auxin response factor 19 (Auxin-responsive protein IAA22)
 gi|37540154|gb|AAG35176.1|  ARF11/IAA22 [Arabidopsis thaliana]
 gi|49616363|gb|AAT67078.1|  ARF19 [Arabidopsis thaliana]
 gi|56961712|gb|AAB91321.2|  early auxin-induced IAA22 [Arabidopsis thaliana]
Length=1086

 Score = 43.1 bits (100),  Expect = 0.002
 Identities = 56/255 (21%), Positives = 87/255 (34%), Gaps = 21/255 (8%)
 Frame = +1

Query  262   NLQRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQ  441
             N Q     + N QF N P     +S Q   Q   +  Q  Q        HQ   LQ+  Q
Sbjct  459   NFQSPNLSSANSQF-NKPNTVNHISQQMQAQPAMVKSQQQQQQQQQQHQHQQQQLQQQQQ  517

Query  442   YMNLSLQSQNP---NHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSL-SHQSHQYMN-  606
                   Q Q     N+  +++   + C S  +   F     Q    +   +  +HQ +N 
Sbjct  518   LQMSQQQVQQQGIYNNGTIAVANQVSCQSPNQPTGFSQSQLQQQSMLPTGAKMTHQNINS  577

Query  607   LSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKR  786
             + ++ ++      Q M  Q+ L               H S Q +    +     +LQ+  
Sbjct  578   MGNKGLSQMTSFAQEMQFQQQLEM-------------HNSSQLLRNQQEQSSLHSLQQNL  624

Query  787   SQNPNHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQFMNLRRKRSQSPNHRFTNLRRSHQ  966
             SQNP    M  Q S    +   Q      L  Q +Q        S  P        +SHQ
Sbjct  625   SQNPQQLQMQQQSSKPSPSQQLQLQLLQKLQQQQQQQSIPPVSSSLQPQLSALQQTQSHQ  684

Query  967   YMNLL--RNHRCMSH  1005
                LL  +N + ++H
Sbjct  685   LQQLLSSQNQQPLAH  699


 Score = 32.0 bits (71),  Expect = 5.3
 Identities = 73/330 (22%), Positives = 115/330 (34%), Gaps = 52/330 (15%)
 Frame = +1

Query  73   PLVPTSYPAMGNHLLLFTNLPR*SHPQFTNHHQFTNLQRSQNPNPLSMNPQrrrsrspsh  252
            PL  ++ P + + L  F NLP      F ++   + L   Q+PN  S N Q  +      
Sbjct  427  PLSGSATPQLPSALSSF-NLPN----NFASNDP-SKLLNFQSPNLSSANSQFNKP-----  475

Query  253  rFTNLQRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQR  432
               N     SQ    Q   +    +    Q+  Q     LQ  Q + +S Q  Q   +  
Sbjct  476  ---NTVNHISQQMQAQPAMVKSQQQQQQQQQQHQHQQQQLQQQQQLQMSQQQVQQQGIYN  532

Query  433  NHQYMNLSLQS-QNPNH-----QYMSLQRSLRCMSLQRNRQFMN------LSHQSHQFMS  576
            N      +  S Q+PN      Q    Q+S+     +   Q +N      LS  +     
Sbjct  533  NGTIAVANQVSCQSPNQPTGFSQSQLQQQSMLPTGAKMTHQNINSMGNKGLSQMTSFAQE  592

Query  577  LSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQ--------  732
            +  Q    M+ S Q +    +     SLQ++L      +N Q + +  QS +        
Sbjct  593  MQFQQQLEMHNSSQLLRNQQEQSSLHSLQQNL-----SQNPQQLQMQQQSSKPSPSQQLQ  647

Query  733  ---FMNLSHQSHQ------FMNLQRKRS---QNPNHQYMSLQRSLQCMNLSHQNHQY-MN  873
                  L  Q  Q        +LQ + S   Q  +HQ   L  S     L+H N+ +  +
Sbjct  648  LQLLQKLQQQQQQQSIPPVSSSLQPQLSALQQTQSHQLQQLLSSQNQQPLAHGNNSFPAS  707

Query  874  LSHQNRQFMNLRRKRSQSPNHRFTNLRRSH  963
               Q  Q     +++ Q  N       RSH
Sbjct  708  TFMQPPQIQVSPQQQGQMSNKNLVAAGRSH  737


>gi|15450866|gb|AAK96704.1|  homeotic protein BEL1 homolog [Arabidopsis thaliana]
Length=513

 Score = 42.4 bits (98),  Expect = 0.004
 Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 19/200 (9%)
 Frame = +1

Query  382  QFMSLSHQSHQFMSLQRNHQYMNLSLQSQNP------NHQYMSLQRSLRCMSLQRNRQFM  543
            QF   ++  HQ    Q  +Q       +QNP      NHQ      ++  M     +Q +
Sbjct  5    QFYGHNNHHHQEQQHQMINQIQGFDETNQNPTDHHHYNHQIFGSNSNMGMMIDFSKQQQI  64

Query  544  NLS-----HQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYM  708
             ++     H  H   S     +Q +  S   M L + ++ F S          QR  Q +
Sbjct  65   RMTSGSDHHHHHHQTSGGTDQNQLLEDSSSAMRLCNVNNDFPSEVNDEG--PPQRPSQGL  122

Query  709  NLSHQSHQFMNLSHQSHQFMNLQRKR---SQNPNHQYMSLQRS---LQCMNLSHQNHQYM  870
            +LS  S    ++S QS +    Q+++   S N + Q+ +LQ +   +  MN  HQN+   
Sbjct  123  SLSLSSSNPTSISLQSFELRPQQQQQQGYSGNKSTQHQNLQHTQMMMMMMNSHHQNNNNN  182

Query  871  NLSHQNRQFMNLRRKRSQSP  930
            N  H N     +   +  SP
Sbjct  183  NHQHHNHHQFQIGSSKYLSP  202


>gi|4104929|gb|AAD02218.1|  auxin response factor 7 [Arabidopsis thaliana]
Length=1164

 Score = 42.4 bits (98),  Expect = 0.004
 Identities = 70/313 (22%), Positives = 108/313 (34%), Gaps = 55/313 (17%)
 Frame = +1

Query  259   TNLQRRKSQNPNHQFMNLPRNHRCMSLQRN-RQFMNLSLQSHQFMSLSHQSHQFMSLQRN  435
             +NLQ  K QN       LP+    +S Q+  +Q ++ SL   Q  S S Q  Q   L + 
Sbjct  476   SNLQFNK-QNQQAPMSQLPQPPTTLSQQQQLQQLLHSSLNHQQQQSQSQQQQQQQQLLQQ  534

Query  436   HQYMNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLSHQSHQYMNLSH  615
              Q +     S N   Q    Q+ L+    Q+ +Q +   HQ      L  Q+ Q    + 
Sbjct  535   QQQLQSQQHSNNNQSQSQQQQQLLQ----QQQQQQLQQQHQ----QPLQQQTQQQQLRTQ  586

Query  616   QFMNLSHQSHQFMSLQRSLRCMSLQRNHQYM-NLSHQSHQFMNLS---------------  747
                + SH   Q +  Q  L+ + + +N  Y    + Q HQ    S               
Sbjct  587   PLQSHSHPQPQQLQ-QHKLQQLQVPQNQLYNGQQAAQQHQAQQASTHHLQPHLVSGSMAS  645

Query  748   ----------HQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQF  897
                       +QS Q    Q K+ Q  +H   +       +  S  +   M+   Q  QF
Sbjct  646   SVITPPSSSLNQSFQQQQQQSKQLQQAHHHLGASTSQSSVIETSKSSSNLMSAPPQETQF  705

Query  898   MNLRRKRSQSP------NHRFTNLRRSHQ-------YMNLLRNHRCMSHLMVTIQDTLQ-  1035
                R+   Q P      N +    +++HQ         +LL        L+  +Q   Q 
Sbjct  706   S--RQVEQQQPPGLNGQNQQTLLQQKAHQAQAQQIFQQSLLEQPHIQFQLLQRLQQQQQQ  763

Query  1036  --WGSHKTSPHHQ  1068
                      PHHQ
Sbjct  764   QFLSPQSQLPHHQ  776


>gi|47496694|dbj|BAD19062.1|  auxin response factor 2 [Cucumis sativus]
Length=1107

 Score = 41.6 bits (96),  Expect = 0.007
 Identities = 43/185 (23%), Positives = 71/185 (38%), Gaps = 10/185 (5%)
 Frame = +1

Query  262  NLQRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQ  441
            NL  + + +   Q   + + H    LQ+     N  LQ +   +L  Q HQ +  Q   Q
Sbjct  522  NLINQNAVSSQIQAQIMQQPHTNGILQQQTALQNQQLQRNAPQNLQMQQHQQILSQNQQQ  581

Query  442  YMNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQ------FMNLSHQSHQFMSLSHQSHQYM  603
             MN S   +  NHQ       +    LQ+ +Q          + Q  Q + L  Q  Q +
Sbjct  582  NMNPSPHLEQLNHQLQMSDNQVHIQMLQKFQQQPQSLLAQQSALQPSQLVQLPDQQRQSV  641

Query  604  NLSHQFMNLSHQSHQFMSLQRSLRCMSLQRN---HQYMNLSHQSHQFMNLSHQSHQFMNL  774
            + S  F + S  S+Q + + +S        N    Q  N + Q++   +  H   +   L
Sbjct  642  DASQSF-SRSMSSNQMLDIPQSTPAAGPPSNALPQQAANCNGQTNNRFSNQHLQPKLPQL  700

Query  775  QRKRS  789
            Q+  S
Sbjct  701  QQPAS  705


>gi|30689268|ref|NP_173925.3|  PFT1 (PHYTOCHROME AND FLOWERING TIME 1) [Arabidopsis thaliana]
 gi|32478899|gb|AAO39425.1|  phytochrome and flowering time 1 protein [Arabidopsis thaliana]
Length=836

 Score = 40.8 bits (94),  Expect = 0.011
 Identities = 38/151 (25%), Positives = 48/151 (31%), Gaps = 11/151 (7%)
 Frame = +1

Query  406  SHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLSH  585
            + Q    Q+ HQ      Q Q    Q   LQ+       Q+ +Q      Q HQ   L H
Sbjct  680  NQQQQQQQQLHQQQQQQQQIQQQQQQQQHLQQQQMPQLQQQQQQHQQQQQQQHQLSQLQH  739

Query  586  QSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQF  765
               Q      Q      Q HQ   LQ        Q+  Q   L+    Q   L+    Q 
Sbjct  740  HQQQQQQQQQQ-----QQQHQLTQLQH-----HHQQQQQASPLNQMQQQTSPLNQMQQQT  789

Query  766  MNL-QRKRSQNPNHQYMSLQRSLQCMNLSHQ  855
              L Q ++ Q P    M  Q   Q    S Q
Sbjct  790  SPLNQMQQQQQPQQMVMGGQAFAQAPGRSQQ  820


 Score = 37.7 bits (86),  Expect = 0.097
 Identities = 25/100 (25%), Positives = 36/100 (36%), Gaps = 4/100 (4%)
 Frame = +1

Query  607  LSHQFMNLSHQSHQFMSLQRSLRCMSLQRNH----QYMNLSHQSHQFMNLSHQSHQFMNL  774
            + +Q      Q HQ    Q+ ++    Q+ H    Q   L  Q  Q      Q HQ   L
Sbjct  678  IPNQQQQQQQQLHQQQQQQQQIQQQQQQQQHLQQQQMPQLQQQQQQHQQQQQQQHQLSQL  737

Query  775  QRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQ  894
            Q  + Q    Q    Q  L  +   HQ  Q  +  +Q +Q
Sbjct  738  QHHQQQQQQQQQQQQQHQLTQLQHHHQQQQQASPLNQMQQ  777


 Score = 37.4 bits (85),  Expect = 0.13
 Identities = 39/153 (25%), Positives = 52/153 (33%), Gaps = 20/153 (13%)
 Frame = +1

Query  277  KSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSH-QFMSLQRNHQYMNL  453
            K Q PN Q     + H     Q+ +Q   +  Q  Q   L  Q   Q    Q+ HQ    
Sbjct  675  KPQIPNQQQQQQQQLH-----QQQQQQQQIQQQQQQQQHLQQQQMPQLQQQQQQHQ----  725

Query  454  SLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLSHQSHQYMNLS--HQFMN  627
              Q Q   HQ   LQ        Q+ +Q      Q HQ   L H   Q    S  +Q   
Sbjct  726  --QQQQQQHQLSQLQHH------QQQQQQQQQQQQQHQLTQLQHHHQQQQQASPLNQMQQ  777

Query  628  LSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQS  726
             +   +Q       L  M  Q+  Q M +  Q+
Sbjct  778  QTSPLNQMQQQTSPLNQMQQQQQPQQMVMGGQA  810


 Score = 37.0 bits (84),  Expect = 0.16
 Identities = 32/130 (24%), Positives = 45/130 (34%), Gaps = 16/130 (12%)
 Frame = +1

Query  550  SHQSHQFMSLSHQSHQYMNLSHQFMNLSH-QSHQFMSLQRSLRCMSLQRNHQYMNLSHQS  726
            + Q  Q   L  Q  Q   +  Q     H Q  Q   LQ        Q+  Q+     Q 
Sbjct  680  NQQQQQQQQLHQQQQQQQQIQQQQQQQQHLQQQQMPQLQ--------QQQQQHQQQQQQQ  731

Query  727  HQFMNLSHQSHQFMNLQRKRSQNPNHQYMSL----QRSLQCMNLSHQNHQYMNLSHQNRQ  894
            HQ   L H   Q    Q+++ Q   HQ   L    Q+  Q   L+    Q   L+   +Q
Sbjct  732  HQLSQLQHHQQQ---QQQQQQQQQQHQLTQLQHHHQQQQQASPLNQMQQQTSPLNQMQQQ  788

Query  895  FMNLRRKRSQ  924
               L + + Q
Sbjct  789  TSPLNQMQQQ  798


 Score = 34.7 bits (78),  Expect = 0.82
 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 11/94 (11%)
 Frame = +1

Query  700  QYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSH-----QNHQ  864
            Q  N   Q  Q ++   Q  Q +  Q+++ Q+   Q M     LQ     H     Q HQ
Sbjct  677  QIPNQQQQQQQQLHQQQQQQQQIQQQQQQQQHLQQQQMP---QLQQQQQQHQQQQQQQHQ  733

Query  865  YMNLSHQNRQFMNLRRKRSQSPNHRFTNLRRSHQ  966
               L H  +Q    ++++ Q   H+ T L+  HQ
Sbjct  734  LSQLQHHQQQ---QQQQQQQQQQHQLTQLQHHHQ  764


 Score = 33.1 bits (74),  Expect = 2.4
 Identities = 28/116 (24%), Positives = 42/116 (36%), Gaps = 18/116 (15%)
 Frame = +1

Query  268  QRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSH------------QSH  411
            Q+++ Q    Q  +L +       Q+ +Q      Q HQ   L H            Q H
Sbjct  695  QQQQIQQQQQQQQHLQQQQMPQLQQQQQQHQQQQQQQHQLSQLQHHQQQQQQQQQQQQQH  754

Query  412  QFMSLQRNHQY------MNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQS  561
            Q   LQ +HQ       +N   Q  +P +Q       L  M  Q+  Q M +  Q+
Sbjct  755  QLTQLQHHHQQQQQASPLNQMQQQTSPLNQMQQQTSPLNQMQQQQQPQQMVMGGQA  810


>gi|16305113|gb|AAL16979.1|  50kD gamma zein [Zea mays]
Length=295

 Score = 40.8 bits (94),  Expect = 0.011
 Identities = 53/239 (22%), Positives = 83/239 (34%), Gaps = 31/239 (12%)
 Frame = +1

Query  283  QNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYMNLSLQ  462
            Q  +H+  + P+ H     Q      +   Q HQ      Q H      +  Q +++  Q
Sbjct  29   QQQSHEQQHHPQQHHPQKQQHQPPPQHHQQQQHQ----QQQVHMQPQKHQQQQEVHVQQQ  84

Query  463  SQNPNHQYMSL----QRSLRCMSLQRNRQFM-------NLSHQSHQFMSLSHQSHQYMNL  609
             Q P HQ        Q+  +C   Q++ Q           SH+ HQ  S   Q HQ    
Sbjct  85   QQQPQHQQQQQQQQHQQQHQCEGQQQHHQQSQGHVQQHEQSHEQHQGQS-HEQQHQQQFQ  143

Query  610  SHQFMNLSHQSHQFM-----SLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQFMNL  774
             H       Q  Q+      S Q+   C   Q   Q    S+  +   +     H+F+  
Sbjct  144  GHDKQQQPQQPQQYQQGQEKSQQQQCHC---QEQQQTTRCSYNYYSSSSNLKNCHEFLRQ  200

Query  775  QRKRSQNPNHQYMSLQRS----LQ---CMNLSHQNHQYMNLSHQNRQFMNLRRKRSQSP  930
            Q      P  Q   +Q S    LQ   C +L     QY++ +  N     ++ ++ Q P
Sbjct  201  QCSPLVMPFLQSRLIQPSSCQVLQQQCCHDLRQIEPQYIHQAIYNMVQSIIQEEQQQQP  259


 Score = 34.7 bits (78),  Expect = 0.82
 Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 25/171 (14%)
 Frame = +1

Query  133  PR*SHPQFTNH------HQFTNLQRSQNPNPLSMNPQrrrsrspshrFTNLQRRKSQNPN  294
            P+  HPQ   H      HQ    Q+ Q    + M PQ+ + +   H     Q+ + Q   
Sbjct  39   PQQHHPQKQQHQPPPQHHQQQQHQQQQ----VHMQPQKHQQQQEVHVQQQQQQPQHQQQQ  94

Query  295  HQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYM----NLSLQ  462
             Q  +  + H+C   Q++ Q     +Q H+    SH+ HQ  S ++ HQ      +   Q
Sbjct  95   QQQQH-QQQHQCEGQQQHHQQSQGHVQQHE---QSHEQHQGQSHEQQHQQQFQGHDKQQQ  150

Query  463  SQNPNH----QYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLSHQSHQYM  603
             Q P      Q  S Q+   C   Q  +Q    S+  +   S     H+++
Sbjct  151  PQQPQQYQQGQEKSQQQQCHC---QEQQQTTRCSYNYYSSSSNLKNCHEFL  198


>gi|12321507|gb|AAG50810.1|AC079281_12  hypothetical protein [Arabidopsis thaliana]
Length=534

 Score = 40.8 bits (94),  Expect = 0.011
 Identities = 38/151 (25%), Positives = 48/151 (31%), Gaps = 11/151 (7%)
 Frame = +1

Query  406  SHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLSH  585
            + Q    Q+ HQ      Q Q    Q   LQ+       Q+ +Q      Q HQ   L H
Sbjct  378  NQQQQQQQQLHQQQQQQQQIQQQQQQQQHLQQQQMPQLQQQQQQHQQQQQQQHQLSQLQH  437

Query  586  QSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQF  765
               Q      Q      Q HQ   LQ        Q+  Q   L+    Q   L+    Q 
Sbjct  438  HQQQQQQQQQQ-----QQQHQLTQLQH-----HHQQQQQASPLNQMQQQTSPLNQMQQQT  487

Query  766  MNL-QRKRSQNPNHQYMSLQRSLQCMNLSHQ  855
              L Q ++ Q P    M  Q   Q    S Q
Sbjct  488  SPLNQMQQQQQPQQMVMGGQAFAQAPGRSQQ  518


 Score = 37.7 bits (86),  Expect = 0.097
 Identities = 25/100 (25%), Positives = 36/100 (36%), Gaps = 4/100 (4%)
 Frame = +1

Query  607  LSHQFMNLSHQSHQFMSLQRSLRCMSLQRNH----QYMNLSHQSHQFMNLSHQSHQFMNL  774
            + +Q      Q HQ    Q+ ++    Q+ H    Q   L  Q  Q      Q HQ   L
Sbjct  376  IPNQQQQQQQQLHQQQQQQQQIQQQQQQQQHLQQQQMPQLQQQQQQHQQQQQQQHQLSQL  435

Query  775  QRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQ  894
            Q  + Q    Q    Q  L  +   HQ  Q  +  +Q +Q
Sbjct  436  QHHQQQQQQQQQQQQQHQLTQLQHHHQQQQQASPLNQMQQ  475


 Score = 37.4 bits (85),  Expect = 0.13
 Identities = 39/153 (25%), Positives = 52/153 (33%), Gaps = 20/153 (13%)
 Frame = +1

Query  277  KSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSH-QFMSLQRNHQYMNL  453
            K Q PN Q     + H     Q+ +Q   +  Q  Q   L  Q   Q    Q+ HQ    
Sbjct  373  KPQIPNQQQQQQQQLH-----QQQQQQQQIQQQQQQQQHLQQQQMPQLQQQQQQHQ----  423

Query  454  SLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLSHQSHQYMNLS--HQFMN  627
              Q Q   HQ   LQ        Q+ +Q      Q HQ   L H   Q    S  +Q   
Sbjct  424  --QQQQQQHQLSQLQHH------QQQQQQQQQQQQQHQLTQLQHHHQQQQQASPLNQMQQ  475

Query  628  LSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQS  726
             +   +Q       L  M  Q+  Q M +  Q+
Sbjct  476  QTSPLNQMQQQTSPLNQMQQQQQPQQMVMGGQA  508


 Score = 37.0 bits (84),  Expect = 0.16
 Identities = 32/130 (24%), Positives = 45/130 (34%), Gaps = 16/130 (12%)
 Frame = +1

Query  550  SHQSHQFMSLSHQSHQYMNLSHQFMNLSH-QSHQFMSLQRSLRCMSLQRNHQYMNLSHQS  726
            + Q  Q   L  Q  Q   +  Q     H Q  Q   LQ        Q+  Q+     Q 
Sbjct  378  NQQQQQQQQLHQQQQQQQQIQQQQQQQQHLQQQQMPQLQ--------QQQQQHQQQQQQQ  429

Query  727  HQFMNLSHQSHQFMNLQRKRSQNPNHQYMSL----QRSLQCMNLSHQNHQYMNLSHQNRQ  894
            HQ   L H   Q    Q+++ Q   HQ   L    Q+  Q   L+    Q   L+   +Q
Sbjct  430  HQLSQLQHHQQQ---QQQQQQQQQQHQLTQLQHHHQQQQQASPLNQMQQQTSPLNQMQQQ  486

Query  895  FMNLRRKRSQ  924
               L + + Q
Sbjct  487  TSPLNQMQQQ  496


 Score = 34.7 bits (78),  Expect = 0.82
 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 11/94 (11%)
 Frame = +1

Query  700  QYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSH-----QNHQ  864
            Q  N   Q  Q ++   Q  Q +  Q+++ Q+   Q M     LQ     H     Q HQ
Sbjct  375  QIPNQQQQQQQQLHQQQQQQQQIQQQQQQQQHLQQQQMP---QLQQQQQQHQQQQQQQHQ  431

Query  865  YMNLSHQNRQFMNLRRKRSQSPNHRFTNLRRSHQ  966
               L H  +Q    ++++ Q   H+ T L+  HQ
Sbjct  432  LSQLQHHQQQ---QQQQQQQQQQHQLTQLQHHHQ  462


 Score = 33.1 bits (74),  Expect = 2.4
 Identities = 28/116 (24%), Positives = 42/116 (36%), Gaps = 18/116 (15%)
 Frame = +1

Query  268  QRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSH------------QSH  411
            Q+++ Q    Q  +L +       Q+ +Q      Q HQ   L H            Q H
Sbjct  393  QQQQIQQQQQQQQHLQQQQMPQLQQQQQQHQQQQQQQHQLSQLQHHQQQQQQQQQQQQQH  452

Query  412  QFMSLQRNHQY------MNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQS  561
            Q   LQ +HQ       +N   Q  +P +Q       L  M  Q+  Q M +  Q+
Sbjct  453  QLTQLQHHHQQQQQASPLNQMQQQTSPLNQMQQQTSPLNQMQQQQQPQQMVMGGQA  508


>gi|24461867|gb|AAN62354.1|AF506028_23  CTV.22 [Poncirus trifoliata]
Length=1405

 Score = 40.4 bits (93),  Expect = 0.015
 Identities = 47/178 (26%), Positives = 69/178 (38%), Gaps = 6/178 (3%)
 Frame = +1

Query  340  QRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMS  519
            Q+ +Q  NL LQ +Q  S      Q  S+  N    + SL     N Q  S+Q+S + M 
Sbjct  287  QQPQQQPNL-LQPNQLQSSQQSGMQTSSVMPN-MMQSASLPGLQQNQQ-SSVQQSTQPMM  343

Query  520  LQRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQ-RSLRCMSLQRN  696
             Q  +  +    Q  Q + + HQ    M           Q  Q M  Q  ++     Q  
Sbjct  344  QQHPQSVLRPQQQQQQTVGI-HQQQTPMPQQSVMPPQQQQQQQLMGQQPNTVNMQQSQLI  402

Query  697  HQYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYM  870
             Q  N+     Q   L  QS+   NLQ++  Q    Q    Q+ +   NLS  +HQ +
Sbjct  403  GQQNNVGDMQQQQRLLGQQSN-LPNLQQQPQQQQQQQQQQQQQLMAQQNLSSMHHQQL  459


 Score = 40.0 bits (92),  Expect = 0.019
 Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 8/121 (6%)
 Frame = +1

Query  625  NLSHQS--HQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRS-QN  795
            NL+ QS  +   S    L+  S    HQ++   HQ  Q +    QS Q   +Q++R  Q 
Sbjct  832  NLASQSGVNMLQSNINPLQSNSNMMQHQHLK-QHQEQQIL----QSQQLKQMQQQRQMQF  886

Query  796  PNHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQFMNLRRKRSQSPNHRFTNLRRSHQYMN  975
               Q M  Q+  Q     HQ  Q+    HQ +     ++  +Q P H+   L + +   +
Sbjct  887  QKQQLMQQQQQQQHQQQQHQQQQHQQQQHQQQHQQAKQQLPAQLPTHQMPQLNQMNDVND  946

Query  976  L  978
            L
Sbjct  947  L  947


 Score = 36.2 bits (82),  Expect = 0.28
 Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 0/78 (0%)
 Frame = +1

Query  268  QRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYM  447
            Q ++ Q    Q +   +  R M  Q+ +       Q HQ      Q HQ    Q+ HQ  
Sbjct  863  QHQEQQILQSQQLKQMQQQRQMQFQKQQLMQQQQQQQHQQQQHQQQQHQQQQHQQQHQQA  922

Query  448  NLSLQSQNPNHQYMSLQR  501
               L +Q P HQ   L +
Sbjct  923  KQQLPAQLPTHQMPQLNQ  940


 Score = 34.7 bits (78),  Expect = 0.82
 Identities = 49/215 (22%), Positives = 80/215 (37%), Gaps = 29/215 (13%)
 Frame = +1

Query  262  NLQRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQ  441
            ++Q+++SQ    Q  +   N +  S+  N     +++Q +   ++ H S   +S     Q
Sbjct  728  SMQQQQSQISQGQPHDNQMNSQIQSM--NLAGSMVTMQPNNVTNVQHNSVPSVSGVSTSQ  785

Query  442  YMNLSLQSQNPNHQY-----MSLQRSLRCMSLQRNR-------QFMNLSHQSHQFMSLSH  585
               L+     PN        +S    +   SLQ+N           NL+ QS   M  S+
Sbjct  786  QNMLNSVLPGPNMDSGQGTSLSSMHQVNAGSLQQNSVSAPQQASINNLASQSGVNMLQSN  845

Query  586  ----------QSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQF  735
                        HQ++    +   L  Q  + M  QR ++    Q   Q     HQ  Q 
Sbjct  846  INPLQSNSNMMQHQHLKQHQEQQILQSQQLKQMQQQRQMQFQKQQLMQQQQQQQHQQQQH  905

Query  736  MNLSH--QSHQFMNLQRKR---SQNPNHQYMSLQR  825
                H  Q HQ  + Q K+   +Q P HQ   L +
Sbjct  906  QQQQHQQQQHQQQHQQAKQQLPAQLPTHQMPQLNQ  940


 Score = 31.6 bits (70),  Expect = 6.9
 Identities = 42/206 (20%), Positives = 63/206 (30%), Gaps = 21/206 (10%)
 Frame = +1

Query  403  QSHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLS  582
            Q  Q M  Q N   M  S Q     +    +Q+  R +  Q N    NL  Q  Q     
Sbjct  382  QQQQLMGQQPNTVNMQQS-QLIGQQNNVGDMQQQQRLLGQQSN--LPNLQQQPQQQQQQQ  438

Query  583  HQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQ  762
             Q  Q +       NLS   HQ +  Q ++  +  Q   Q +     +       H +H 
Sbjct  439  QQQQQQLMAQQ---NLSSMHHQQLGPQSNVSGLQQQPQQQLLGTQSGNSSMQTNQHPAHM  495

Query  763  FM---------------NLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQF  897
                             NL   + Q    Q    Q   Q  +   Q  Q + L  Q    
Sbjct  496  LQQPKVPLQQQMQQSAPNLLPNQGQQQQSQPQQQQMMSQIQSQPTQLQQQLGLQQQPNPL  555

Query  898  MNLRRKRSQSPNHRFTNLRRSHQYMN  975
                ++R Q+      +L +    M+
Sbjct  556  QRDMQQRLQASGQASASLLQPQNVMD  581


>gi|108706444|gb|ABF94239.1|  hypothetical protein LOC_Os03g07720 [Oryza sativa (japonica cultivar-group)]
Length=730

 Score = 39.7 bits (91),  Expect = 0.025
 Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
 Frame = +1

Query  685  LQRNH--QYMNLSHQS-HQFMNLSHQSH--QFMNLQRKRSQNPNH---QYMSLQRSLQCM  840
            LQ+NH  QY    HQ  ++  N  H  H  Q    Q+ +  N NH   QY   Q+  Q  
Sbjct  146  LQQNHHQQYQQHHHQQQYEHQNRIHFQHHRQQQQYQQHQHHNQNHHQQQYQQQQQQYQHQ  205

Query  841  NLSHQNHQYMNLSHQNRQFMNLRRKRSQ  924
            NL  Q  Q      Q  Q  NL++++ Q
Sbjct  206  NLQQQYQQQQQNLQQQYQHQNLQQQQQQ  233


 Score = 38.1 bits (87),  Expect = 0.074
 Identities = 28/117 (23%), Positives = 41/117 (35%), Gaps = 23/117 (19%)
 Frame = +1

Query  466  QNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSH  645
            QN + QY            Q+  +  N  H  H      +Q HQ+ N +H       Q  
Sbjct  148  QNHHQQYQQHHH-------QQQYEHQNRIHFQHHRQQQQYQQHQHHNQNHHQQQYQQQ--  198

Query  646  QFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMS  816
                          Q+ +Q+ NL  Q  Q      Q +Q  NLQ+++ Q    Q  S
Sbjct  199  --------------QQQYQHQNLQQQYQQQQQNLQQQYQHQNLQQQQQQQQQQQQPS  241


 Score = 37.4 bits (85),  Expect = 0.13
 Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 0/82 (0%)
 Frame = +1

Query  688  QRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQY  867
            Q+ +++ N  H  H      +Q HQ  N    + Q    Q     ++LQ      Q +  
Sbjct  160  QQQYEHQNRIHFQHHRQQQQYQQHQHHNQNHHQQQYQQQQQQYQHQNLQQQYQQQQQNLQ  219

Query  868  MNLSHQNRQFMNLRRKRSQSPN  933
                HQN Q    ++++ Q P+
Sbjct  220  QQYQHQNLQQQQQQQQQQQQPS  241


 Score = 33.5 bits (75),  Expect = 1.8
 Identities = 25/92 (27%), Positives = 34/92 (36%), Gaps = 7/92 (7%)
 Frame = +1

Query  292  NHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYMNLSLQSQN  471
            NH       +H+     +NR       Q  Q+    HQ H     Q+ +Q      Q QN
Sbjct  149  NHHQQYQQHHHQQQYEHQNRIHFQHHRQQQQYQQ--HQHHNQNHHQQQYQQQQQQYQHQN  206

Query  472  PNHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQ  567
               QY   Q++L     Q+  Q  NL  Q  Q
Sbjct  207  LQQQYQQQQQNL-----QQQYQHQNLQQQQQQ  233


 Score = 31.6 bits (70),  Expect = 6.9
 Identities = 22/91 (24%), Positives = 34/91 (37%), Gaps = 9/91 (9%)
 Frame = +1

Query  577  LSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQS  756
            L    HQ     H      HQ+       R        + HQ+ N +H   Q+     Q 
Sbjct  146  LQQNHHQQYQQHHHQQQYEHQNRIHFQHHRQ---QQQYQQHQHHNQNHHQQQYQQ-QQQQ  201

Query  757  HQFMNLQRKRSQNPN-----HQYMSLQRSLQ  834
            +Q  NLQ++  Q        +Q+ +LQ+  Q
Sbjct  202  YQHQNLQQQYQQQQQNLQQQYQHQNLQQQQQ  232


>gi|115478458|ref|NP_001062824.1|  Os09g0306700 [Oryza sativa (japonica cultivar-group)]
 gi|51091708|dbj|BAD36509.1|  putative SMA-9 class B [Oryza sativa (japonica cultivar-group)]
 gi|113631057|dbj|BAF24738.1|  Os09g0306700 [Oryza sativa (japonica cultivar-group)]
Length=842

 Score = 39.3 bits (90),  Expect = 0.033
 Identities = 37/131 (28%), Positives = 50/131 (38%), Gaps = 17/131 (12%)
 Frame = +1

Query  514  MSLQRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQR  693
            M  Q+ +Q  N   Q +Q     HQ HQ      Q  N   Q HQ   LQ+ L+   LQ 
Sbjct  657  MQQQQLQQQQNQLQQQNQL----HQQHQL-----QPQNQLQQQHQ---LQQQLQQQQLQ-  703

Query  694  NHQYMNLSHQSHQFMNLSHQSH--QFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQY  867
              Q+M L  Q         Q H  Q   +Q+ + Q    Q   +Q+  Q   +  Q  Q 
Sbjct  704  --QHMQLQTQGLPLQQQQSQGHPLQQQQMQQMQQQQQQQQIQQMQQQQQMQQMQQQQQQP  761

Query  868  MNLSHQNRQFM  900
              L  Q +  M
Sbjct  762  QQLQQQQQPQM  772


 Score = 33.1 bits (74),  Expect = 2.4
 Identities = 35/144 (24%), Positives = 47/144 (32%), Gaps = 27/144 (18%)
 Frame = +1

Query  310  LPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFM---SLQRNHQYMNLSLQSQNPNH  480
            +P     M  Q+ +Q  N   Q +Q     HQ HQ      LQ+ HQ             
Sbjct  650  VPTQQPPMQQQQLQQQQNQLQQQNQL----HQQHQLQPQNQLQQQHQ-------------  692

Query  481  QYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSL  660
                LQ+ L+   LQ   Q M L  Q         Q H       Q M    Q  Q   +
Sbjct  693  ----LQQQLQQQQLQ---QHMQLQTQGLPLQQQQSQGHPLQQQQMQQMQQQQQQQQIQQM  745

Query  661  QRSLRCMSLQRNHQYMNLSHQSHQ  732
            Q+  +   +Q+  Q      Q  Q
Sbjct  746  QQQQQMQQMQQQQQQPQQLQQQQQ  769


 Score = 33.1 bits (74),  Expect = 2.4
 Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
 Frame = +1

Query  688  QRNHQYMNLSHQSHQF--MNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNH  861
            Q   Q  N  HQ HQ    N   Q HQ   LQ++  Q    Q+M LQ   Q + L  Q  
Sbjct  666  QNQLQQQNQLHQQHQLQPQNQLQQQHQ---LQQQLQQQQLQQHMQLQ--TQGLPLQQQQS  720

Query  862  QYMNLSHQNRQFMNLRRKRSQ  924
            Q   L  Q  Q M  ++++ Q
Sbjct  721  QGHPLQQQQMQQMQQQQQQQQ  741


 Score = 31.6 bits (70),  Expect = 6.9
 Identities = 33/122 (27%), Positives = 44/122 (36%), Gaps = 20/122 (16%)
 Frame = +1

Query  427  QRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLSHQSHQYMN  606
            Q+  Q     LQ QN  HQ   LQ   +   LQ+  Q      Q         Q  Q+M 
Sbjct  659  QQQLQQQQNQLQQQNQLHQQHQLQPQNQ---LQQQHQLQQQLQQQ--------QLQQHMQ  707

Query  607  LSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKR  786
            L  Q + L  Q  Q   LQ        Q+  Q M    Q  Q   +  Q  Q   +Q+++
Sbjct  708  LQTQGLPLQQQQSQGHPLQ--------QQQMQQMQQQQQQQQIQQMQQQQ-QMQQMQQQQ  758

Query  787  SQ  792
             Q
Sbjct  759  QQ  760


>gi|110740489|dbj|BAE98350.1|  auxin response factor 7 [Arabidopsis thaliana]
Length=416

 Score = 38.1 bits (87),  Expect = 0.074
 Identities = 40/204 (19%), Positives = 74/204 (36%), Gaps = 13/204 (6%)
 Frame = +1

Query  343  RNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSL  522
            +  +   L +  +Q  +    + Q  S Q +  ++   L S +     ++   S    S 
Sbjct  50   QQHKLQQLQVPQNQLYNGQQAAQQHQSQQASTHHLQPQLVSGSMASSVITPPSSSLNQSF  109

Query  523  QRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQ  702
            Q+ +Q      Q+H  +  S      +  S    NL     Q     R +     Q+   
Sbjct  110  QQQQQQSKQLQQAHHHLGASTSQSSVIETSKSSSNLMSAPPQETQFSRQVE----QQQPP  165

Query  703  YMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMN---  873
             +N  +Q       +HQ+      Q+   + P+ Q+  LQR  Q      Q  Q+++   
Sbjct  166  GLNGQNQQTLLQQKAHQAQAQQIFQQSLLEQPHIQFQLLQRLQQ-----QQQQQFLSPQS  220

Query  874  -LSHQNRQFMNLRRKRSQSPNHRF  942
             L H   Q   L++  + S  H+F
Sbjct  221  QLPHHQLQSQQLQQLPTLSQGHQF  244


>gi|92875390|gb|ABE83383.1|  RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula]
Length=454

 Score = 37.4 bits (85),  Expect = 0.13
 Identities = 40/162 (24%), Positives = 55/162 (33%), Gaps = 36/162 (22%)
 Frame = +1

Query  523   QRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQ  702
             Q   Q  N   Q  Q      Q HQY               Q+MS+Q     M++ +   
Sbjct  12    QNQNQNQNQHQQQQQQQWAQQQPHQYQQ-------------QWMSMQYPATAMAMMQQQM  58

Query  703   YMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMNLSH  882
              M   H    +M   H  H        + Q P+ Q +S   S    +  HQ HQY    H
Sbjct  59    MMYPQH----YMPYVHPHHY-------QQQPPHQQQVSPPPSAHSHHGGHQQHQYQ--QH  105

Query  883   QNRQFMNLRRKRSQSPNH-RFTNLRRSHQYMNLLRNHRCMSH  1005
             Q +Q          +P   R   L   H +M+    H C +H
Sbjct  106   QQKQL---------APEEIRTIWLGDLHHWMDETFLHNCFAH  138


>gi|50261759|gb|AAT72460.1|  FCA gamma protein [Lolium perenne]
Length=668

 Score = 37.4 bits (85),  Expect = 0.13
 Identities = 49/210 (23%), Positives = 82/210 (39%), Gaps = 16/210 (7%)
 Frame = +1

Query  352  QFMNLSLQSHQFMSLSHQSHQ--FMSLQRNHQYMNLSLQSQ---NPNHQYMSL-QRSLRC  513
            Q   L LQ    M  S+QS Q     LQ+  Q M    Q Q   N N Q  +L Q+    
Sbjct  443  QAPQLLLQQQAAMQSSYQSSQQAIFQLQQQLQLMQQQQQQQQQPNLNQQQPNLNQQQHTQ  502

Query  514  MSLQRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLS-----HQS-----HQFMSLQ  663
            +S Q+ +   + +  +   M  S+ +     ++   ++L+     H S     + + S+ 
Sbjct  503  ISKQQGQPNQSSTPGAPAAMMPSNINAIPQQVNSPAVSLTCNWTEHTSPEGFKYYYNSIT  562

Query  664  RSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMN  843
            R  +    +    Y     Q  Q   +  Q HQ   + ++    P  Q +   +S+Q   
Sbjct  563  RESKWEKPEEYVLYEQQQQQQQQQKLILLQQHQQKLVAQQLQSPPRAQAIQCMQSIQQHP  622

Query  844  LSHQNHQYMNLSHQNRQFMNLRRKRSQSPN  933
             SHQ H  M + HQ   +  L+   +  PN
Sbjct  623  QSHQGHNQMQMKHQELNYNQLQATGNIDPN  652


 Score = 32.0 bits (71),  Expect = 5.3
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
 Frame = +1

Query  586  QSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCM-SLQRNHQYMNLSHQSHQFMNLSHQSHQ  762
            Q  + + L      L  Q  Q     ++++CM S+Q++ Q    SHQ H  M + HQ   
Sbjct  584  QQQKLILLQQHQQKLVAQQLQSPPRAQAIQCMQSIQQHPQ----SHQGHNQMQMKHQELN  639

Query  763  FMNLQRKRSQNPNHQYMSLQ  822
            +  LQ   + +PN     +Q
Sbjct  640  YNQLQATGNIDPNRIQQGIQ  659


>gi|22329848|ref|NP_174230.2|  unknown protein [Arabidopsis thaliana]
 gi|17380760|gb|AAL36210.1|  unknown protein [Arabidopsis thaliana]
 gi|20465691|gb|AAM20314.1|  unknown protein [Arabidopsis thaliana]
Length=831

 Score = 37.0 bits (84),  Expect = 0.16
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
 Frame = +1

Query  268  QRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYM  447
            Q+ + QN N    +     R MS      + NL  Q+ Q + L HQ  Q  + Q    Y 
Sbjct  718  QQHQQQNENSAMWHQGHGSRTMSGVPTNTYYNL--QAQQQLQLQHQQQQQQAQQAAGGYR  775

Query  448  NLSLQSQNPNHQYMSLQRSLRCMSLQRNRQ  537
                Q    +H Y +  +S   MSL+R +Q
Sbjct  776  QAQQQQHYGSHGYPNYYQSQTEMSLERQQQ  805


>gi|18087627|gb|AAL58943.1|AF462857_1  At1g29350/F15D2_27 [Arabidopsis thaliana]
Length=832

 Score = 37.0 bits (84),  Expect = 0.16
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
 Frame = +1

Query  268  QRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYM  447
            Q+ + QN N    +     R MS      + NL  Q+ Q + L HQ  Q  + Q    Y 
Sbjct  718  QQHQQQNENSAMWHQGHGSRTMSGVPTNTYYNL--QAQQQLQLQHQQQQQQAQQAAGGYR  775

Query  448  NLSLQSQNPNHQYMSLQRSLRCMSLQRNRQ  537
                Q    +H Y +  +S   MSL+R +Q
Sbjct  776  QAQQQQHYGSHGYPNYYQSQTEMSLERQQQ  805


>gi|12323523|gb|AAG51735.1|AC068667_14  unknown protein; 25451-20507 [Arabidopsis thaliana]
Length=858

 Score = 37.0 bits (84),  Expect = 0.16
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
 Frame = +1

Query  268  QRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYM  447
            Q+ + QN N    +     R MS      + NL  Q+ Q + L HQ  Q  + Q    Y 
Sbjct  745  QQHQQQNENSAMWHQGHGSRTMSGVPTNTYYNL--QAQQQLQLQHQQQQQQAQQAAGGYR  802

Query  448  NLSLQSQNPNHQYMSLQRSLRCMSLQRNRQ  537
                Q    +H Y +  +S   MSL+R +Q
Sbjct  803  QAQQQQHYGSHGYPNYYQSQTEMSLERQQQ  832


>gi|12323517|gb|AAG51729.1|AC068667_8  unknown protein; 16040-11188 [Arabidopsis thaliana]
Length=858

 Score = 37.0 bits (84),  Expect = 0.16
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
 Frame = +1

Query  268  QRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYM  447
            Q+ + QN N    +     R MS      + NL  Q+ Q + L HQ  Q  + Q    Y 
Sbjct  745  QQHQQQNENSAMWHQGHGSRTMSGVPTNTYYNL--QAQQQLQLQHQQQQQQAQQAAGGYR  802

Query  448  NLSLQSQNPNHQYMSLQRSLRCMSLQRNRQ  537
                Q    +H Y +  +S   MSL+R +Q
Sbjct  803  QAQQQQHYGSHGYPNYYQSQTEMSLERQQQ  832


>gi|22329844|ref|NP_174229.2|  unknown protein [Arabidopsis thaliana]
Length=831

 Score = 37.0 bits (84),  Expect = 0.16
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
 Frame = +1

Query  268  QRRKSQNPNHQFMNLPRNHRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYM  447
            Q+ + QN N    +     R MS      + NL  Q+ Q + L HQ  Q  + Q    Y 
Sbjct  718  QQHQQQNENSAMWHQGHGSRTMSGVPTNTYYNL--QAQQQLQLQHQQQQQQAQQAAGGYR  775

Query  448  NLSLQSQNPNHQYMSLQRSLRCMSLQRNRQ  537
                Q    +H Y +  +S   MSL+R +Q
Sbjct  776  QAQQQQHYGSHGYPNYYQSQTEMSLERQQQ  805


>gi|18418011|ref|NP_568334.1|  KAN (KANADI); transcription factor [Arabidopsis thaliana]
 gi|14345995|gb|AAK59989.1|  KANADI protein [Arabidopsis thaliana]
 gi|15723591|gb|AAL05436.1|  GARP-like putative transcription factor KANADI1 [Arabidopsis 
thaliana]
 gi|111074340|gb|ABH04543.1|  At5g16560 [Arabidopsis thaliana]
Length=403

 Score = 36.6 bits (83),  Expect = 0.22
 Identities = 43/205 (20%), Positives = 79/205 (38%), Gaps = 32/205 (15%)
 Frame = +1

Query  373  QSHQFMSLSHQSHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLS  552
            Q H   S    S +   L+ N++  N  L   + NH      R   C     +R+ +NL 
Sbjct  33   QYHHNESSKESSRRSSQLENNNRSSNFELSLSHHNHP---TARIFHCP----DRRTLNLP  85

Query  553  HQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQ  732
            HQ H    + +  HQ ++ S           +  +L R +R + +  N  +     Q+  
Sbjct  86   HQQHYNNPIINGVHQRVDES-----------EISNLHRPIRGIPVYHNRSF-PFHQQNSS  133

Query  733  FMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQFMNLRR  912
              +L       +++    S   N+ Y SLQ S +   +   +H      H + Q+  +  
Sbjct  134  LPSLGGGDMDQISILNS-SSGYNNAYRSLQSSPRLKGVPLHHH------HHHNQYGVVGS  186

Query  913  KRSQSPNHRFTNLRRSHQYMNLLRN  987
              S SP+H       +H +  ++R+
Sbjct  187  SDSSSPHH------HNHHHHGMIRS  205


>gi|9759140|dbj|BAB09625.1|  unnamed protein product [Arabidopsis thaliana]
Length=270

 Score = 36.6 bits (83),  Expect = 0.22
 Identities = 43/205 (20%), Positives = 79/205 (38%), Gaps = 32/205 (15%)
 Frame = +1

Query  373  QSHQFMSLSHQSHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLS  552
            Q H   S    S +   L+ N++  N  L   + NH      R   C     +R+ +NL 
Sbjct  33   QYHHNESSKESSRRSSQLENNNRSSNFELSLSHHNHP---TARIFHCP----DRRTLNLP  85

Query  553  HQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQ  732
            HQ H    + +  HQ ++ S           +  +L R +R + +  N  +     Q+  
Sbjct  86   HQQHYNNPIINGVHQRVDES-----------EISNLHRPIRGIPVYHNRSF-PFHQQNSS  133

Query  733  FMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQFMNLRR  912
              +L       +++    S   N+ Y SLQ S +   +   +H      H + Q+  +  
Sbjct  134  LPSLGGGDMDQISILNS-SSGYNNAYRSLQSSPRLKGVPLHHH------HHHNQYGVVGS  186

Query  913  KRSQSPNHRFTNLRRSHQYMNLLRN  987
              S SP+H       +H +  ++R+
Sbjct  187  SDSSSPHH------HNHHHHGMIRS  205


>gi|92891032|gb|ABE90620.1|  Transcriptional factor B3; Auxin response factor; Aux/IAA_ARF_dimerisation 
[Medicago truncatula]
Length=1096

 Score = 36.2 bits (82),  Expect = 0.28
 Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 20/178 (11%)
 Frame = +1

Query  376  SHQFMSLSHQSHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSH  555
            ++Q +  S    Q ++ Q   Q  N+ LQSQ P+ Q   L RSL    LQ+ +Q +   +
Sbjct  512  AYQTLPQSQVQTQLLNPQSIVQTNNI-LQSQQPSIQNNQLHRSLSQNPLQQFQQTIIGQN  570

Query  556  QSHQFMSLSHQSH--QYMNLSH-----QFMNLSHQSHQFMSLQRSLRCMSLQRNHQYMNL  714
            Q    +  +   H  Q +++S      Q +    Q  Q +  Q+S    +LQ+  Q +  
Sbjct  571  QPQNMIRPTMPDHINQQLHMSDNQVRLQLLQKLQQQQQTLLSQQS----ALQQPAQIIQN  626

Query  715  SHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLSHQNHQYMNLSHQN  888
              Q  Q ++++H S       R+  + P+    +LQ SL  +  +  NHQ  + S QN
Sbjct  627  HDQQRQELDVTHNSRAI--TPRQVFEIPH----TLQNSL--LEANSMNHQMTDHSSQN  676


>gi|115444555|ref|NP_001046057.1|  Os02g0175700 [Oryza sativa (japonica cultivar-group)]
 gi|50251206|dbj|BAD27613.1|  synaptosomal-associated protein 91-like [Oryza sativa (japonica 
cultivar-group)]
 gi|113535588|dbj|BAF07971.1|  Os02g0175700 [Oryza sativa (japonica cultivar-group)]
Length=583

 Score = 36.2 bits (82),  Expect = 0.28
 Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 9/69 (13%)
 Frame = +1

Query  529  NRQFMNLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRSLRCMSLQRNHQYM  708
            N QF  L+ Q HQ+    HQ   Y    H F +  HQ H  M  Q        Q+N  Y 
Sbjct  489  NVQFAMLNQQQHQYYQSQHQQQYYQ--PHHFQD--HQHHHNMYFQ-----THYQQNQIYQ  539

Query  709  NLSHQSHQF  735
                Q HQ+
Sbjct  540  QQQQQQHQY  548


>gi|108711607|gb|ABF99402.1|  expressed protein [Oryza sativa (japonica cultivar-group)]
Length=553

 Score = 35.8 bits (81),  Expect = 0.37
 Identities = 31/154 (20%), Positives = 59/154 (38%), Gaps = 6/154 (3%)
 Frame = +1

Query  445  MNLSLQSQNPNHQYMSLQRS-LRCMSLQRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQF  621
            M ++ Q+  P  Q   LQ+  LR   L   R  + ++ ++   +++  ++     +   +
Sbjct  308  MGINTQNLTPQQQQQLLQQQWLRRNQLASPRGPLTMADKNQAMVNVKIENTVDSQIDSPY  367

Query  622  MNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPN  801
             +L+ Q      LQ+      LQ+  Q      Q  Q      Q  Q    Q+++     
Sbjct  368  GSLTRQQ-----LQQLRHHQLLQQQQQQFQQQQQVQQQQQQQQQQFQHQQQQQQQQFQQQ  422

Query  802  HQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQFMN  903
            HQ     + LQ  +   Q  Q +   HQ +  M+
Sbjct  423  HQQQQQSQQLQQQHQQQQQPQQLQQQHQQQLAMS  456


>gi|90101517|gb|ABD85198.1|  alpha-gliadin Gli2-LM2-12 [Triticum aestivum]
Length=313

 Score = 35.8 bits (81),  Expect = 0.37
 Identities = 58/241 (24%), Positives = 82/241 (34%), Gaps = 25/241 (10%)
 Frame = +1

Query  193  QNPNPLSMNPQrrrsrspshrFTNLQRR-KSQNPNHQFMNLPRNHRCMSLQRNRQFMNLS  369
            Q  NP    PQ +       +F   Q++   Q P  Q    P     + LQ   Q     
Sbjct  29   QPQNPSQQQPQEQVPLVQQQQFPGQQQQFPPQQPYPQPQPFPSQQPYLQLQPFPQPQPFP  88

Query  370  LQSHQFMSLSHQSHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMN-  546
             Q         Q   F   Q   Q     LQ Q P  Q  + Q+  +    Q+ +Q +  
Sbjct  89   PQLPY-----PQPQSFPPQQPYPQQQPQYLQPQQPISQQQAQQQQQQQQQQQQQQQILQQ  143

Query  547  -LSHQSHQFMSLSHQSHQYMNLSHQFMNLS-HQSHQFMSLQRSLRCMSLQRNHQYMNLSH  720
             L  Q      +  Q H   + S Q +  S +Q  Q +  Q+ L+     R     N++H
Sbjct  144  ILQQQLIPCRDVVLQQHNIAHASSQVLQQSTYQLLQQLCCQQLLQIPEQSRCQAIHNVAH  203

Query  721  ----------QSHQFMNLSHQSHQFMNLQRKRS------QNPNHQYMSLQRSLQCMNLSH  852
                      Q  Q   L  Q  Q +  QR++       Q P  QY S Q S Q   L+ 
Sbjct  204  AIIMHQQQQQQQEQQQQLQQQQQQQLQQQRQQPSSQVSFQQPQQQYPSSQVSFQPSQLNP  263

Query  853  Q  855
            Q
Sbjct  264  Q  264


 Score = 32.7 bits (73),  Expect = 3.1
 Identities = 25/102 (24%), Positives = 38/102 (37%), Gaps = 2/102 (1%)
 Frame = +1

Query  298  QFMNLPRNHRCMSLQR--NRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYMNLSLQSQN  471
            Q + +P   RC ++    +   M+   Q  Q      Q  Q   LQ+  Q  +  +  Q 
Sbjct  185  QLLQIPEQSRCQAIHNVAHAIIMHQQQQQQQEQQQQLQQQQQQQLQQQRQQPSSQVSFQQ  244

Query  472  PNHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQFMSLSHQSHQ  597
            P  QY S Q S +   L    Q      Q  QF  + + + Q
Sbjct  245  PQQQYPSSQVSFQPSQLNPQAQGPVQPQQLPQFAEIRNLALQ  286


>gi|115455997|ref|NP_001051599.1|  Os03g0802300 [Oryza sativa (japonica cultivar-group)]
 gi|29150375|gb|AAO72384.1|  unknow protein [Oryza sativa (japonica cultivar-group)]
 gi|108711606|gb|ABF99401.1|  expressed protein [Oryza sativa (japonica cultivar-group)]
 gi|113550070|dbj|BAF13513.1|  Os03g0802300 [Oryza sativa (japonica cultivar-group)]
Length=681

 Score = 35.8 bits (81),  Expect = 0.37
 Identities = 31/154 (20%), Positives = 59/154 (38%), Gaps = 6/154 (3%)
 Frame = +1

Query  445  MNLSLQSQNPNHQYMSLQRS-LRCMSLQRNRQFMNLSHQSHQFMSLSHQSHQYMNLSHQF  621
            M ++ Q+  P  Q   LQ+  LR   L   R  + ++ ++   +++  ++     +   +
Sbjct  436  MGINTQNLTPQQQQQLLQQQWLRRNQLASPRGPLTMADKNQAMVNVKIENTVDSQIDSPY  495

Query  622  MNLSHQSHQFMSLQRSLRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPN  801
             +L+ Q      LQ+      LQ+  Q      Q  Q      Q  Q    Q+++     
Sbjct  496  GSLTRQQ-----LQQLRHHQLLQQQQQQFQQQQQVQQQQQQQQQQFQHQQQQQQQQFQQQ  550

Query  802  HQYMSLQRSLQCMNLSHQNHQYMNLSHQNRQFMN  903
            HQ     + LQ  +   Q  Q +   HQ +  M+
Sbjct  551  HQQQQQSQQLQQQHQQQQQPQQLQQQHQQQLAMS  584


>gi|30677982|ref|NP_178323.2|  unknown protein [Arabidopsis thaliana]
Length=1141

 Score = 35.8 bits (81),  Expect = 0.37
 Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 10/146 (6%)
 Frame = +1

Query  388   MSLSHQSHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQ  567
             +++S + ++F   +R H+ +  S+ S N    +  +  S    +L   + F     QS Q
Sbjct  985   VAISARDYKFYCPRRKHRRLQNSVSSINGLPTFPGIDSS----TLANTQGFRE--DQSQQ  1038

Query  568   FMSLSHQSHQYMNLSHQFMNLSHQSHQ-FMSLQRSLRCMS--LQRNHQY-MNLSHQSHQF  735
               + S   H   +LSHQF    HQSHQ   S+ +S    +    +NHQ    LSH     
Sbjct  1039  QHTPSPSKHHMSSLSHQFHQSIHQSHQHHQSIYQSQHAATHYPSQNHQCDPELSHTQMAC  1098

Query  736   MNLSHQSHQFMNLQRKRSQNPNHQYM  813
             +      H   N   K       QY+
Sbjct  1099  LQPLTGGHVMPNSPAKFCDQCGAQYL  1124


>gi|62320448|dbj|BAD94934.1|  hypothetical protein [Arabidopsis thaliana]
Length=432

 Score = 35.8 bits (81),  Expect = 0.37
 Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 10/146 (6%)
 Frame = +1

Query  388  MSLSHQSHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQRSLRCMSLQRNRQFMNLSHQSHQ  567
            +++S + ++F   +R H+ +  S+ S N    +  +  S    +L   + F     QS Q
Sbjct  276  VAISARDYKFYCPRRKHRRLQNSVSSINGLPTFPGIDSS----TLANTQGFRE--DQSQQ  329

Query  568  FMSLSHQSHQYMNLSHQFMNLSHQSHQ-FMSLQRSLRCMS--LQRNHQY-MNLSHQSHQF  735
              + S   H   +LSHQF    HQSHQ   S+ +S    +    +NHQ    LSH     
Sbjct  330  QHTPSPSKHHMSSLSHQFHQSIHQSHQHHQSIYQSQHAATHYPSQNHQCDPELSHTQMAC  389

Query  736  MNLSHQSHQFMNLQRKRSQNPNHQYM  813
            +      H   N   K       QY+
Sbjct  390  LQPLTGGHVMPNSPAKFCDQCGAQYL  415


>gi|1076557|pir||S54157  extensin-like protein - cowpea (fragment)
Length=279

 Score = 35.8 bits (81),  Expect = 0.37
 Identities = 54/252 (21%), Positives = 92/252 (36%), Gaps = 45/252 (17%)
 Frame = +1

Query  322   HRCMSLQRNRQFMNLSLQSHQFMSLSHQSHQFMSLQRNHQYMNLSLQSQNPNHQYMSLQR  501
             H C+S  R+       L  H  +  +  SH  + L  +H +M +S    +  H ++ +  
Sbjct  9     HMCISHHRHH------LLHHHLLMFT--SHHLLHLLPHHLHMCISRHHHHLLHHHLLMFT  60

Query  502   SLRCMSLQRNRQFM----NLSHQSHQFMSLSHQSHQYMNLSHQFMNLSHQSHQFMSLQRS  669
             S   + L  +   M    +L H     + +    H + +L H+ + L   SH  + L   
Sbjct  61    SHHLLHLLPHHLPMFTSLHLLHLLPHHLPMCISPHHH-HLLHRHL-LMFTSHHLLHLLPH  118

Query  670   LRCMSLQRNHQYMNLSHQSHQFMNLSHQSHQFMNLQRKRSQNPNHQYMSLQRSLQCMNLS  849
                M + R+H ++ +S   H    L H                 H  MS    L  + L 
Sbjct  119   HLHMCISRHHHHLPMSTSPHHHHLLHH-----------------HLPMSTSHPLLHLLL-  160

Query  850   HQNHQYMNLSHQNRQFMNLRRKRSQSPNHRFTNLRRSHQYMNLLRNHRCMSHLMVTIQDT  1029
               +H +M +SH +   ++LR     SP+           + +L   H    HL + I   
Sbjct  161   --HHLHMCISHHHHHLLHLRLPTFTSPHLLHLLPHHLPMFTSLHLLHLLPHHLPMCI---  215

Query  1030  LQWGSHKTSPHH  1065
                     SPHH
Sbjct  216   --------SPHH  219