RID=1168940737-17037-82385471067.BLASTQ4, Contig161

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168940737-17037-82385471067.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig161
Length=297

Distribution of 23 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|23397269|gb|AAN31916.1|  unknown protein [Arabidopsis thaliana  38.9    0.002 
gi|15237846|ref|NP_197777.1|  unknown protein [Arabidopsis tha...  38.9    0.002 
gi|18491169|gb|AAL69487.1|  unknown protein [Arabidopsis thaliana  34.3    0.14  
gi|42573662|ref|NP_974927.1|  unknown protein [Arabidopsis thalia  34.3    0.14  
gi|22327782|ref|NP_200054.2|  unknown protein [Arabidopsis thalia  34.3    0.14  
gi|10177407|dbj|BAB10538.1|  unnamed protein product [Arabidopsis  34.3    0.14 
gi|108712243|gb|ABG00038.1|  expressed protein [Oryza sativa (jap  32.7    0.40 
gi|108712244|gb|ABG00039.1|  expressed protein [Oryza sativa (jap  32.7    0.40 
gi|115456771|ref|NP_001051986.1|  Os03g0862100 [Oryza sativa (...  32.7    0.40  
gi|31193924|gb|AAP44759.1|  unknown protein [Oryza sativa (japoni  32.7    0.40  
gi|15239917|ref|NP_196789.1|  transcription factor [Arabidopsi...  28.9    5.7   
gi|20466590|gb|AAM20612.1|  zinc finger transcription factor-l...  28.9    5.7   
gi|90265203|emb|CAH67719.1|  H0613A10.2 [Oryza sativa (indica cul  28.5    7.5  
gi|77555354|gb|ABA98150.1|  retrotransposon protein, putative,...  28.5    7.5  
gi|246217|gb|AAB21531.1|  thionin [Hordeum vulgare=barley, ssp...  28.1    9.8  
gi|4836911|gb|AAD30613.1|AC007153_5  Putative ADP-glucose pyro...  28.1    9.8  
gi|42561720|ref|NP_172052.2|  APS2; glucose-1-phosphate adenyl...  28.1    9.8   
gi|31408040|emb|CAD60664.1|  putative glucose-1-phosphate aden...  28.1    9.8  
gi|2507457|sp|P09618|THN6_HORVU  Leaf-specific thionin BTH6 pr...  28.1    9.8

Alignments

 

>gi|23397269|gb|AAN31916.1|  unknown protein [Arabidopsis thaliana]
Length=946

 Score = 38.9 bits (89),  Expect(2) = 0.002
 Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = +1

Query  145  LATGEASGPS*VRNLHVLKQESMAENAVSAHTALVAQVEKGCQCKF  282
            L++GEAS       L  ++ ESMAE AVSAH ALVA+VEK     F
Sbjct  627  LSSGEASDIV-SEELARIEAESMAEKAVSAHNALVAEVEKDVNASF  671


 Score = 20.4 bits (41),  Expect(2) = 0.002
 Identities = 8/9 (88%), Positives = 9/9 (100%), Gaps = 0/9 (0%)
 Frame = +2

Query  263  KDVNASFEE  289
            KDVNASFE+
Sbjct  665  KDVNASFEK  673


 Score = 30.0 bits (66),  Expect = 2.6
 Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
 Frame = +3

Query  21   ALMADLSSGRNKGIIALAFGCVRTVPARISLWTRGspscccscnw*sFRT*LSEEFARIE  200
            +++ADLS+G  +GI ALAFGC R       + T+G  +   S         +SEE ARIE
Sbjct  589  SIIADLSTGE-QGIAALAFGCTRLFQPHKPV-TKGQAAIALSSGEA--SDIVSEELARIE  644

Query  201  A  203
            A
Sbjct  645  A  645


>gi|15237846|ref|NP_197777.1|  unknown protein [Arabidopsis thaliana]
 gi|10176856|dbj|BAB10062.1|  unnamed protein product [Arabidopsis thaliana]
Length=946

 Score = 38.9 bits (89),  Expect(2) = 0.002
 Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = +1

Query  145  LATGEASGPS*VRNLHVLKQESMAENAVSAHTALVAQVEKGCQCKF  282
            L++GEAS       L  ++ ESMAE AVSAH ALVA+VEK     F
Sbjct  627  LSSGEASDIV-SEELARIEAESMAEKAVSAHNALVAEVEKDVNASF  671


 Score = 20.4 bits (41),  Expect(2) = 0.002
 Identities = 8/9 (88%), Positives = 9/9 (100%), Gaps = 0/9 (0%)
 Frame = +2

Query  263  KDVNASFEE  289
            KDVNASFE+
Sbjct  665  KDVNASFEK  673


 Score = 30.0 bits (66),  Expect = 2.6
 Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
 Frame = +3

Query  21   ALMADLSSGRNKGIIALAFGCVRTVPARISLWTRGspscccscnw*sFRT*LSEEFARIE  200
            +++ADLS+G  +GI ALAFGC R       + T+G  +   S         +SEE ARIE
Sbjct  589  SIIADLSTGE-QGIAALAFGCTRLFQPHKPV-TKGQAAIALSSGEA--SDIVSEELARIE  644

Query  201  A  203
            A
Sbjct  645  A  645


>gi|18491169|gb|AAL69487.1|  unknown protein [Arabidopsis thaliana]
Length=510

 Score = 34.3 bits (77),  Expect = 0.14
 Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 0/29 (0%)
 Frame = +1

Query  196  LKQESMAENAVSAHTALVAQVEKGCQCKF  282
            ++ E+MAEN V AH  LVAQVEK     F
Sbjct  204  IEAEAMAENVVCAHNELVAQVEKDINASF  232


>gi|42573662|ref|NP_974927.1|  unknown protein [Arabidopsis thaliana]
Length=761

 Score = 34.3 bits (77),  Expect = 0.14
 Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 0/29 (0%)
 Frame = +1

Query  196  LKQESMAENAVSAHTALVAQVEKGCQCKF  282
            ++ E+MAEN V AH  LVAQVEK     F
Sbjct  455  IEAEAMAENVVCAHNELVAQVEKDINASF  483


>gi|22327782|ref|NP_200054.2|  unknown protein [Arabidopsis thaliana]
Length=510

 Score = 34.3 bits (77),  Expect = 0.14
 Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 0/29 (0%)
 Frame = +1

Query  196  LKQESMAENAVSAHTALVAQVEKGCQCKF  282
            ++ E+MAEN V AH  LVAQVEK     F
Sbjct  204  IEAEAMAENVVCAHNELVAQVEKDINASF  232


>gi|10177407|dbj|BAB10538.1|  unnamed protein product [Arabidopsis thaliana]
Length=790

 Score = 34.3 bits (77),  Expect = 0.14
 Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 0/29 (0%)
 Frame = +1

Query  196  LKQESMAENAVSAHTALVAQVEKGCQCKF  282
            ++ E+MAEN V AH  LVAQVEK     F
Sbjct  484  IEAEAMAENVVCAHNELVAQVEKDINASF  512


>gi|108712243|gb|ABG00038.1|  expressed protein [Oryza sativa (japonica cultivar-group)]
Length=608

 Score = 32.7 bits (73),  Expect = 0.40
 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = +1

Query  145  LATGEASGPS*VRNLHVLKQESMAENAVSAHTALVAQVEKGCQCKF  282
            L+TG+++    +  L  ++ E +AE+AV+AH  LVAQVEK     F
Sbjct  287  LSTGDSADVV-MEELARIEAEKIAEDAVNAHGELVAQVEKDLNATF  331


>gi|108712244|gb|ABG00039.1|  expressed protein [Oryza sativa (japonica cultivar-group)]
Length=444

 Score = 32.7 bits (73),  Expect = 0.40
 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = +1

Query  145  LATGEASGPS*VRNLHVLKQESMAENAVSAHTALVAQVEKGCQCKF  282
            L+TG+++    +  L  ++ E +AE+AV+AH  LVAQVEK     F
Sbjct  287  LSTGDSADVV-MEELARIEAEKIAEDAVNAHGELVAQVEKDLNATF  331


>gi|115456771|ref|NP_001051986.1|  Os03g0862100 [Oryza sativa (japonica cultivar-group)]
 gi|108712242|gb|ABG00037.1|  expressed protein [Oryza sativa (japonica cultivar-group)]
 gi|113550457|dbj|BAF13900.1|  Os03g0862100 [Oryza sativa (japonica cultivar-group)]
Length=918

 Score = 32.7 bits (73),  Expect = 0.40
 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = +1

Query  145  LATGEASGPS*VRNLHVLKQESMAENAVSAHTALVAQVEKGCQCKF  282
            L+TG+++    +  L  ++ E +AE+AV+AH  LVAQVEK     F
Sbjct  597  LSTGDSADVV-MEELARIEAEKIAEDAVNAHGELVAQVEKDLNATF  641


>gi|31193924|gb|AAP44759.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
Length=935

 Score = 32.7 bits (73),  Expect = 0.40
 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = +1

Query  145  LATGEASGPS*VRNLHVLKQESMAENAVSAHTALVAQVEKGCQCKF  282
            L+TG+++    +  L  ++ E +AE+AV+AH  LVAQVEK     F
Sbjct  614  LSTGDSADVV-MEELARIEAEKIAEDAVNAHGELVAQVEKDLNATF  658


>gi|15239917|ref|NP_196789.1|  transcription factor [Arabidopsis thaliana]
 gi|7630041|emb|CAB88249.1|  zinc finger transcription factor-like protein [Arabidopsis thaliana]
 gi|110742550|dbj|BAE99190.1|  zinc finger transcription factor -like protein [Arabidopsis thaliana]
Length=706

 Score = 28.9 bits (63),  Expect = 5.7
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = -2

Query  155  PVARATAAWASPCPQAYPGWNSPHTAKSKCYYSLVPSRRQVSHKCGSCR  9
            P +RA +   + CP A+PG N+      K +Y+ VP       K GSC+
Sbjct  267  PCSRAYSHDWTECPFAHPGENARRRDPRKFHYTCVPC---PDFKKGSCK  312


>gi|20466590|gb|AAM20612.1|  zinc finger transcription factor-like protein [Arabidopsis thaliana]
 gi|22136426|gb|AAM91291.1|  zinc finger transcription factor-like protein [Arabidopsis thaliana]
Length=706

 Score = 28.9 bits (63),  Expect = 5.7
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = -2

Query  155  PVARATAAWASPCPQAYPGWNSPHTAKSKCYYSLVPSRRQVSHKCGSCR  9
            P +RA +   + CP A+PG N+      K +Y+ VP       K GSC+
Sbjct  267  PCSRAYSHDWTECPFAHPGENARRRDPRKFHYTCVPC---PDFKKGSCK  312


>gi|90265203|emb|CAH67719.1|  H0613A10.2 [Oryza sativa (indica cultivar-group)]
Length=1809

 Score = 28.5 bits (62),  Expect = 7.5
 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 0/27 (0%)
 Frame = -3

Query  256   LELLKQYEQTLHFPP*IPASIRANSSL  176
             LEL+K Y+  +H+ P +PAS+    +L
Sbjct  1309  LELIKDYDLGIHYHPGVPASLTVQPTL  1335


>gi|77555354|gb|ABA98150.1|  retrotransposon protein, putative, Ty3-gypsy subclass [Oryza 
sativa (japonica cultivar-group)]
Length=1480

 Score = 28.5 bits (62),  Expect = 7.5
 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 0/27 (0%)
 Frame = -3

Query  256   LELLKQYEQTLHFPP*IPASIRANSSL  176
             LEL+K Y+  +H+ P +PAS+    +L
Sbjct  1016  LELIKDYDLGIHYHPGVPASLTVQPTL  1042


>gi|246217|gb|AAB21531.1|  thionin [Hordeum vulgare=barley, ssp. vulgare, leaf, cv. Carina, 
Peptide, 137 aa]
Length=137

 Score = 28.1 bits (61),  Expect = 9.8
 Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 0/38 (0%)
 Frame = -2

Query  206  SCFNTCKFLT*LGPEASPVARATAAWASPCPQAYPGWN  93
            +C+NTC+F     P  +   R        CP  YP  N
Sbjct  39   NCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLN  76


>gi|4836911|gb|AAD30613.1|AC007153_5  Putative ADP-glucose pyrophosphorylase, small subunit precursor 
[Arabidopsis thaliana]
Length=480

 Score = 28.1 bits (61),  Expect = 9.8
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 0/40 (0%)
 Frame = -1

Query  291  LSSKLALTSFLNLSY*SSMSRHCIFRHRFLLQYVQIPHLT  172
            +SS   +T F NL    S S H  +RH + L+ + IP+L+
Sbjct  3    ISSSSFITKFTNLHMVRSTSDHHQWRHNYNLKQLFIPNLS  42


>gi|42561720|ref|NP_172052.2|  APS2; glucose-1-phosphate adenylyltransferase/ nucleotidyltransferase 
[Arabidopsis thaliana]
Length=476

 Score = 28.1 bits (61),  Expect = 9.8
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 0/40 (0%)
 Frame = -1

Query  291  LSSKLALTSFLNLSY*SSMSRHCIFRHRFLLQYVQIPHLT  172
            +SS   +T F NL    S S H  +RH + L+ + IP+L+
Sbjct  3    ISSSSFITKFTNLHMVRSTSDHHQWRHNYNLKQLFIPNLS  42


>gi|31408040|emb|CAD60664.1|  putative glucose-1-phosphate adenylyltransferase small subunit 
[Arabidopsis thaliana]
Length=476

 Score = 28.1 bits (61),  Expect = 9.8
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 0/40 (0%)
 Frame = -1

Query  291  LSSKLALTSFLNLSY*SSMSRHCIFRHRFLLQYVQIPHLT  172
            +SS   +T F NL    S S H  +RH + L+ + IP+L+
Sbjct  3    ISSSSFITKFTNLHMVRSTSDHHQWRHNYNLKQLFIPNLS  42


>gi|2507457|sp|P09618|THN6_HORVU  Leaf-specific thionin BTH6 precursor [Contains: Leaf-specific 
thionin BTH6; Acidic protein]
 gi|1209249|gb|AAA91047.1|  thionin [Hordeum vulgare]
Length=137

 Score = 28.1 bits (61),  Expect = 9.8
 Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 0/38 (0%)
 Frame = -2

Query  206  SCFNTCKFLT*LGPEASPVARATAAWASPCPQAYPGWN  93
            +C+NTC+F     P  +   R        CP  YP  N
Sbjct  39   NCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLN  76

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 171
Number of extensions: 2
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 297
Length of database: 101054579
Length adjustment: 68
Effective length of query: 229
Effective length of database: 81786847
Effective search space: 2535392257
Effective search space used: 2535392257
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)