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BLASTX 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168941690-11648-165409057539.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig181
Length=338


Distribution of 53 Blast Hits on the Query Sequence



Related Structures

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|1709654|sp|P11970|PLAS2_POPNI  Plastocyanin B, chloroplast ...  64.3    1e-10
gi|130271|sp|P17340|PLAS_LYCES  Plastocyanin, chloroplast prec...  63.9    2e-10 Gene info
gi|1709651|sp|P00299|PLAS1_POPNI  Plastocyanin A, chloroplast ...  63.5    2e-10
gi|110349917|emb|CAJ19272.1|  plastocyanin precursor [Solanum com  62.8    4e-10
gi|21592405|gb|AAM64356.1|  plastocyanin, putative [Arabidopsis t  62.8    4e-10 UniGene info
gi|15217918|ref|NP_173459.1|  DRT112; copper ion binding / ele...  62.8    4e-10 UniGene infoGene info
gi|6723444|emb|CAB66894.1|  putative plastocyanin [Arabidopsis th  62.8    4e-10
gi|130285|sp|P00289|PLAS_SPIOL  Plastocyanin, chloroplast prec...  60.1    2e-09
gi|166696|gb|AAA32787.1|  DRT112                                   59.3    4e-09 UniGene info
gi|166790|gb|AAA32834.1|  plastocyanin                             57.4    1e-08
gi|6573730|gb|AAF17650.1|AC009978_26  T23E18.3 [Arabidopsis thali  57.4    1e-08
gi|15222956|ref|NP_177737.1|  copper ion binding / electron tr...  57.4    1e-08 UniGene infoGene info
gi|224721|prf||1111289A  plastocyanin precursor                    55.5    6e-08
gi|130282|sp|P07030|PLAS_SILPR  Plastocyanin, chloroplast prec...  55.5    6e-08
gi|130275|sp|P16002|PLAS_PEA  Plastocyanin, chloroplast precur...  51.6    8e-07
gi|21759334|sp|O22646|PLAS_FRIAG  Plastocyanin, chloroplast pr...  49.3    4e-06
gi|108936774|emb|CAJ34813.1|  plastocyanine [Plantago major]       47.4    2e-05
gi|17369634|sp|Q9SXW9|PLAS_PHYPA  Plastocyanin, chloroplast pr...  45.4    6e-05
gi|130265|sp|P00292|PLAS_CUCPE  Plastocyanin                       39.7    0.003
gi|130279|sp|P00298|PLAS_RUMOB  Plastocyanin                       38.1    0.009
gi|223146|prf||0512260A  plastocyanin                              38.1    0.009
gi|82407305|pdb|1TEF|A  Chain A, Crystal Structure Of The Spin...  37.4    0.016 Related structures
gi|130284|sp|P00296|PLAS_SOLTU  Plastocyanin                       37.4    0.016
gi|3891757|pdb|1AG6|   Chain  , Plastocyanin From Spinach          37.4    0.016 Related structures
gi|3024399|sp|P56274|PLAS_ULVPE  Plastocyanin >gi|2392379|pdb|1IU  37.0    0.021
gi|130287|sp|P13133|PLAS_ULVAR  Plastocyanin                       36.6    0.027
gi|40455718|gb|AAR85968.1|  ERT10 [Nicotiana tabacum]              35.8    0.046 UniGene info
gi|548525|sp|P35476|PLAS1_TOBAC  Plastocyanin A'/A'' >gi|54464...  35.8    0.046
gi|548526|sp|P35477|PLAS2_TOBAC  Plastocyanin B'/B'' >gi|54464...  35.8    0.046
gi|130266|sp|P00293|PLAS_CUCSA  Plastocyanin >gi|223787|prf||0911  35.4    0.060
gi|230657|pdb|2PCY|   Chain  , Apo-Plastocyanin (pH 6.0) >gi|2...  35.4    0.060 Related structures
gi|225877|prf||1402239A  plastocyanin b                            35.4    0.060
gi|130262|sp|P00294|PLAS_CAPBU  Plastocyanin >gi|223148|prf||0512  35.4    0.060
gi|130283|sp|P00297|PLAS_SOLCR  Plastocyanin >gi|223147|prf||0512  35.4    0.060
gi|130268|sp|P07465|PLAS_ENTPR  Plastocyanin >gi|231267|pdb|7PCY|  35.0    0.079
gi|130280|sp|P00291|PLAS_SAMNI  Plastocyanin                       35.0    0.079
gi|48526878|gb|AAT45616.1|  plastocyanin precursor [Ulva pertusa]  34.7    0.10 
gi|82407307|pdb|1TEG|A  Chain A, Crystal Structure Of The Spin...  34.7    0.10  Related structures
gi|46015034|pdb|1OOW|A  Chain A, The Crystal Structure Of The ...  34.7    0.10  Related structures
gi|130272|sp|P00295|PLAS_MERPE  Plastocyanin                       34.7    0.10 
gi|3114360|pdb|2PCF|A  Chain A, The Complex Of Cytochrome F An...  34.7    0.10  Related structures
gi|18158977|pdb|1JXG|A  Chain A, The 1.6 A Resolution Crystal ...  33.9    0.18  Related structures
gi|223149|prf||0512262B  plastocyanin                              33.5    0.23 
gi|130276|sp|P17341|PLAS_PETCR  Plastocyanin A/B >gi|640354|pd...  33.5    0.23 
gi|130267|sp|P20422|PLAS_DAUCA  Plastocyanin                       33.5    0.23 
gi|6435665|pdb|1BYO|A  Chain A, Wild-Type Plastocyanin From Si...  32.0    0.67  Related structures
gi|130288|sp|P00288|PLAS_VICFA  Plastocyanin                       32.0    0.67 
gi|6435642|pdb|1BYP|A  Chain A, E43k,D44k Double Mutant Plastocya  32.0    0.67  Related structures
gi|130277|sp|P00287|PLAS_PHAVU  Plastocyanin                       31.2    1.1  
gi|1421476|pdb|9PCY|   Chain  , Plastocyanin (Reduced Form) (Nmr,  31.2    1.1   Related structures
gi|116060023|emb|CAL56082.1|  unnamed protein product [Ostreococc  30.4    1.9  
gi|78099097|sp|P84338|PLAS_GINBI  Plastocyanin                     30.4    1.9  
gi|130270|sp|P00290|PLAS_LACSA  Plastocyanin >gi|229615|prf||7659  28.1    9.7  
Alignments
>gi|1709654|sp|P11970|PLAS2_POPNI Plastocyanin B, chloroplast precursor gi|929815|emb|CAA90565.1| plastocyanin b precursor [Populus nigra] Length=168 Score = 64.3 bits (155), Expect = 1e-10 Identities = 59/92 (64%), Positives = 72/92 (78%), Gaps = 1/92 (1%) Frame = +2 Query 65 MAAVTSAAVAIPSFTGLkagatpakasattkvatssG-PMLSIKASLKDVGvavaataas 241 MAAVTSAAV+IPSFTGLKA + + + ++S P LSIKASLK+VG AV ATAAS Sbjct 1 MAAVTSAAVSIPSFTGLKAASASNAKVSASAKVSASPLPRLSIKASLKEVGAAVVATAAS 60 Query 242 ailasnalaiEVKLGGDDGELAFVPSDFSVSA 337 A++ASNA+A++V LG DDG LAFVPS+FSV A Sbjct 61 AMIASNAMAVDVLLGADDGSLAFVPSEFSVPA 92 >gi|130271|sp|P17340|PLAS_LYCES Gene info Plastocyanin, chloroplast precursor gi|19300|emb|CAA32121.1| UniGene infoGene info unnamed protein product [Solanum lycopersicum] Length=170 Score = 63.9 bits (154), Expect = 2e-10 Identities = 61/94 (64%), Positives = 72/94 (76%), Gaps = 3/94 (3%) Frame = +2 Query 65 MAAVTSAAVAIPSFTGLkagatpakasattkvatssGP---MLSIKASLKDVGvavaata 235 MA VTSAAVAIPSFTGLKAGA+ + +T A + L++KASLKDVG VAATA Sbjct 1 MATVTSAAVAIPSFTGLKAGASSSSRVSTGASAKVAAAPVARLTVKASLKDVGAVVAATA 60 Query 236 asailasnalaiEVKLGGDDGELAFVPSDFSVSA 337 SA+LASNA+A+EV LGGDDG LAF+P +FSVSA Sbjct 61 VSAMLASNAMALEVLLGGDDGSLAFIPGNFSVSA 94 >gi|1709651|sp|P00299|PLAS1_POPNI Plastocyanin A, chloroplast precursor gi|929813|emb|CAA90564.1| plastocyanin a [Populus nigra] Length=168 Score = 63.5 bits (153), Expect = 2e-10 Identities = 59/91 (64%), Positives = 72/91 (79%), Gaps = 1/91 (1%) Frame = +2 Query 65 MAAVTSAAVAIPSFTGLkagatpakasattkvatssG-PMLSIKASLKDVGvavaataas 241 MA VTSAAV+IPSFTGLKAG+ + + ++S P LSIKAS+KDVG AV ATAAS Sbjct 1 MATVTSAAVSIPSFTGLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAAS 60 Query 242 ailasnalaiEVKLGGDDGELAFVPSDFSVS 334 A++ASNA+AI+V LG DDG LAFVPS+FS+S Sbjct 61 AMIASNAMAIDVLLGADDGSLAFVPSEFSIS 91 >gi|110349917|emb|CAJ19272.1| plastocyanin precursor [Solanum commersonii] Length=171 Score = 62.8 bits (151), Expect = 4e-10 Identities = 60/94 (63%), Positives = 72/94 (76%), Gaps = 3/94 (3%) Frame = +2 Query 65 MAAVTSAAVAIPSFTGLkagatpakasattkvatssGP---MLSIKASLKDVGvavaata 235 MA VTSAAVAIPSFTGLKAGA+ + +T A + L++KASLKDVG VAATA Sbjct 1 MATVTSAAVAIPSFTGLKAGASSSSRVSTAASAKVAAAPAARLTVKASLKDVGAVVAATA 60 Query 236 asailasnalaiEVKLGGDDGELAFVPSDFSVSA 337 SA+LASNA+A++V LGGDDG LAF+P +FSVSA Sbjct 61 VSAMLASNAMALDVLLGGDDGSLAFIPGNFSVSA 94 >gi|21592405|gb|AAM64356.1| UniGene info plastocyanin, putative [Arabidopsis thaliana] Length=167 Score = 62.8 bits (151), Expect = 4e-10 Identities = 52/90 (57%), Positives = 66/90 (73%), Gaps = 0/90 (0%) Frame = +2 Query 65 MAAVTSAAVAIPSFTGLkagatpakasattkvatssGPMLSIKASLKDVGvavaataasa 244 MA+VTSA VAIPSFTGLKA + A+ + A + P L++K+SLK+ GVA A AAS Sbjct 1 MASVTSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAASI 60 Query 245 ilasnalaiEVKLGGDDGELAFVPSDFSVS 334 LA NA+AIEV LGG DG LAF+P+DFS++ Sbjct 61 ALAGNAMAIEVLLGGGDGSLAFIPNDFSIA 90 >gi|15217918|ref|NP_173459.1| UniGene infoGene info DRT112; copper ion binding / electron transporter [Arabidopsis thaliana] gi|12644265|sp|P42699|PLAS2_ARATH Gene info Plastocyanin major isoform, chloroplast precursor (DNA-damage-repair/toleration protein DRT112) gi|9558592|gb|AAF88155.1|AC026234_6 Gene info Contains similarity to a DNA-damage-repair/toleration protein DRT112 precursor from Arabidopsis thaliana gi|1169201 and is a member of the copper binding proteins family PF|00127. ESTs gb|BE039446, gb|T46296, gb|N64992, gb|T21043, gb|BE039361, gb|T41789, gb|AA728654, gb|T22293, gb|T42572, gb|R65100, gb|N65354, gb|N37323, gb|R90003, gb|BE039026, gb|BE038950, gb|AA713227 come from this gene gi|11692900|gb|AAG40053.1|AF324702_1 UniGene infoGene info At1g20340 [Arabidopsis thaliana] gi|11908064|gb|AAG41461.1|AF326879_1 UniGene infoGene info putative plastocyanin [Arabidopsis thaliana] gi|12247995|gb|AAG50089.1|AF334383_1 UniGene infoGene info putative plastocyanin [Arabidopsis thaliana] gi|13605744|gb|AAK32865.1|AF361853_1 UniGene infoGene info At1g20340/F14O10_4 [Arabidopsis thaliana] gi|24111321|gb|AAN46784.1| UniGene infoGene info At1g20340/F14O10_4 [Arabidopsis thaliana] Length=167 Score = 62.8 bits (151), Expect = 4e-10 Identities = 52/90 (57%), Positives = 66/90 (73%), Gaps = 0/90 (0%) Frame = +2 Query 65 MAAVTSAAVAIPSFTGLkagatpakasattkvatssGPMLSIKASLKDVGvavaataasa 244 MA+VTSA VAIPSFTGLKA + A+ + A + P L++K+SLK+ GVA A AAS Sbjct 1 MASVTSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAASI 60 Query 245 ilasnalaiEVKLGGDDGELAFVPSDFSVS 334 LA NA+AIEV LGG DG LAF+P+DFS++ Sbjct 61 ALAGNAMAIEVLLGGGDGSLAFIPNDFSIA 90 >gi|6723444|emb|CAB66894.1| putative plastocyanin [Arabidopsis thaliana] Length=167 Score = 62.8 bits (151), Expect = 4e-10 Identities = 52/90 (57%), Positives = 66/90 (73%), Gaps = 0/90 (0%) Frame = +2 Query 65 MAAVTSAAVAIPSFTGLkagatpakasattkvatssGPMLSIKASLKDVGvavaataasa 244 MA+VTSA VAIPSFTGLKA + A+ + A + P L++K+SLK+ GVA A AAS Sbjct 1 MASVTSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAASI 60 Query 245 ilasnalaiEVKLGGDDGELAFVPSDFSVS 334 LA NA+AIEV LGG DG LAF+P+DFS++ Sbjct 61 ALAGNAMAIEVLLGGGDGSLAFIPNDFSIA 90 >gi|130285|sp|P00289|PLAS_SPIOL Plastocyanin, chloroplast precursor gi|21267|emb|CAA28398.1| unnamed protein product [Spinacia oleracea] Length=168 Score = 60.1 bits (144), Expect = 2e-09 Identities = 54/92 (58%), Positives = 69/92 (75%), Gaps = 1/92 (1%) Frame = +2 Query 65 MAAV-TSAAVAIPSFTGLkagatpakasattkvatssGPMLSIKASLKDVGvavaataas 241 MA V +SAAVA+PSFTGLKA + +A T++ P LS+KASLK+VG AV ATAA+ Sbjct 1 MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60 Query 242 ailasnalaiEVKLGGDDGELAFVPSDFSVSA 337 +LA NA+A+EV LGG DG LAF+P DFSV++ Sbjct 61 GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVAS 92 >gi|166696|gb|AAA32787.1| UniGene info DRT112 Length=167 Score = 59.3 bits (142), Expect = 4e-09 Identities = 52/90 (57%), Positives = 66/90 (73%), Gaps = 0/90 (0%) Frame = +2 Query 65 MAAVTSAAVAIPSFTGLkagatpakasattkvatssGPMLSIKASLKDVGvavaataasa 244 MA+VTS V IPSFTGLKA T + A+ T+ A + P L++K+SLK+ GVA A AAS Sbjct 1 MASVTSTTVPIPSFTGLKASTTKSSATVRTQTAAVASPKLTVKSSLKNFGVAAVAPAASI 60 Query 245 ilasnalaiEVKLGGDDGELAFVPSDFSVS 334 LA NA+AIEV LGG DG LAF+P+DFS++ Sbjct 61 ALAGNAMAIEVLLGGGDGSLAFIPNDFSIA 90 >gi|166790|gb|AAA32834.1| plastocyanin Length=171 Score = 57.4 bits (137), Expect = 1e-08 Identities = 52/94 (55%), Positives = 66/94 (70%), Gaps = 4/94 (4%) Frame = +2 Query 65 MAAVTSAAVAIPSFTGLkagatpakasattkvatssG----PMLSIKASLKDVGvavaat 232 MAA+TSA V IPSFTGLK + + +T +SS P L++K+SLKD GV AT Sbjct 1 MAAITSATVTIPSFTGLKLAVSSKPKTLSTISRSSSATRAPPKLALKSSLKDFGVIAVAT 60 Query 233 aasailasnalaiEVKLGGDDGELAFVPSDFSVS 334 AAS +LA NA+A+EV LG DDG LAFVPS+F+V+ Sbjct 61 AASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVA 94 >gi|6573730|gb|AAF17650.1|AC009978_26 T23E18.3 [Arabidopsis thaliana] Length=207 Score = 57.4 bits (137), Expect = 1e-08 Identities = 51/94 (54%), Positives = 66/94 (70%), Gaps = 4/94 (4%) Frame = +2 Query 65 MAAVTSAAVAIPSFTGLkagatpakasattkvatssG----PMLSIKASLKDVGvavaat 232 MAA+TSA V IPSFTGLK + + +T ++S P L++K+SLKD GV AT Sbjct 37 MAAITSATVTIPSFTGLKLAVSSKPKTLSTISRSTSATRAPPKLALKSSLKDFGVIAVAT 96 Query 233 aasailasnalaiEVKLGGDDGELAFVPSDFSVS 334 AAS +LA NA+A+EV LG DDG LAFVPS+F+V+ Sbjct 97 AASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVA 130 >gi|15222956|ref|NP_177737.1| UniGene infoGene info copper ion binding / electron transporter [Arabidopsis thaliana] gi|12644119|sp|P11490|PLAS1_ARATH Gene info Plastocyanin minor isoform, chloroplast precursor gi|1865683|emb|CAB05911.1| Gene info plastocyanin [Arabidopsis thaliana] gi|62867621|gb|AAY17414.1| UniGene infoGene info At1g76100 [Arabidopsis thaliana] gi|98960919|gb|ABF58943.1| UniGene infoGene info At1g76100 [Arabidopsis thaliana] gi|110740507|dbj|BAE98359.1| Gene info plastocyanin [Arabidopsis thaliana] Length=171 Score = 57.4 bits (137), Expect = 1e-08 Identities = 51/94 (54%), Positives = 66/94 (70%), Gaps = 4/94 (4%) Frame = +2 Query 65 MAAVTSAAVAIPSFTGLkagatpakasattkvatssG----PMLSIKASLKDVGvavaat 232 MAA+TSA V IPSFTGLK + + +T ++S P L++K+SLKD GV AT Sbjct 1 MAAITSATVTIPSFTGLKLAVSSKPKTLSTISRSTSATRAPPKLALKSSLKDFGVIAVAT 60 Query 233 aasailasnalaiEVKLGGDDGELAFVPSDFSVS 334 AAS +LA NA+A+EV LG DDG LAFVPS+F+V+ Sbjct 61 AASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVA 94 >gi|224721|prf||1111289A plastocyanin precursor Length=165 Score = 55.5 bits (132), Expect = 6e-08 Identities = 60/92 (65%), Positives = 68/92 (73%), Gaps = 4/92 (4%) Frame = +2 Query 65 MAAVTS-AAVAIPSFTGLkagatpakasattkvatssGPMLSIKASLKDVGvavaataas 241 MA VTS AAVAIPSF GLKA +T A+ VAT P +SIKASLKDVGV VAATAA+ Sbjct 1 MATVTSSAAVAIPSFAGLKASSTTRAATVKVAVAT---PRMSIKASLKDVGVVVAATAAA 57 Query 242 ailasnalaiEVKLGGDDGELAFVPSDFSVSA 337 ILA NA+A EV LG DG LAFVPSD S+++ Sbjct 58 GILAGNAMAAEVLLGSSDGGLAFVPSDLSIAS 89 >gi|130282|sp|P07030|PLAS_SILPR Plastocyanin, chloroplast precursor gi|21366|emb|CAA26709.1| unnamed protein product [Silene latifolia subsp. alba] Length=165 Score = 55.5 bits (132), Expect = 6e-08 Identities = 60/92 (65%), Positives = 68/92 (73%), Gaps = 4/92 (4%) Frame = +2 Query 65 MAAVTS-AAVAIPSFTGLkagatpakasattkvatssGPMLSIKASLKDVGvavaataas 241 MA VTS AAVAIPSF GLKA +T A+ VAT P +SIKASLKDVGV VAATAA+ Sbjct 1 MATVTSSAAVAIPSFAGLKASSTTRAATVKVAVAT---PRMSIKASLKDVGVVVAATAAA 57 Query 242 ailasnalaiEVKLGGDDGELAFVPSDFSVSA 337 ILA NA+A EV LG DG LAFVPSD S+++ Sbjct 58 GILAGNAMAAEVLLGSSDGGLAFVPSDLSIAS 89 >gi|130275|sp|P16002|PLAS_PEA Plastocyanin, chloroplast precursor gi|20846|emb|CAA34212.1| unnamed protein product [Pisum sativum] gi|226940|prf||1611464A plastocyanin Length=168 Score = 51.6 bits (122), Expect = 8e-07 Identities = 54/92 (58%), Positives = 64/92 (69%), Gaps = 1/92 (1%) Frame = +2 Query 65 MAAVTSAAVAIPSFTGLkagatpakasattkvatss-GPMLSIKASLKDVGvavaataas 241 MA VTS VAIPSF+GLK A ++ ++S P L ++ASLKD GVA+ ATAAS Sbjct 1 MATVTSTTVAIPSFSGLKTNAATKVSAMAKIPTSTSQSPRLCVRASLKDFGVALVATAAS 60 Query 242 ailasnalaiEVKLGGDDGELAFVPSDFSVSA 337 A+LASNALA+EV LG DG LAFVPS VSA Sbjct 61 AVLASNALAVEVLLGASDGGLAFVPSSLEVSA 92 >gi|21759334|sp|O22646|PLAS_FRIAG Plastocyanin, chloroplast precursor gi|2641207|gb|AAB86855.1| plastocyanin [Fritillaria agrestis] Length=166 Score = 49.3 bits (116), Expect = 4e-06 Identities = 57/93 (61%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = +2 Query 65 MAAVTSAAVAIPSFTGLkagatpakasattkvatssGPM-LSIKASLKD-VGvavaataa 238 MA++TSAAV IPSFTGLKAG P S + K T PM S+KAS K+ +G A+ ATAA Sbjct 1 MASLTSAAVTIPSFTGLKAGRAPTTPSTSIKPPT---PMSFSVKASFKEAIGTALVATAA 57 Query 239 sailasnalaiEVKLGGDDGELAFVPSDFSVSA 337 A+LASNALA+EV LGG DG LAFVPS+ V+A Sbjct 58 GAVLASNALAVEVLLGGSDGSLAFVPSNIEVAA 90 >gi|108936774|emb|CAJ34813.1| plastocyanine [Plantago major] Length=191 Score = 47.4 bits (111), Expect = 2e-05 Identities = 57/112 (50%), Positives = 71/112 (63%), Gaps = 16/112 (14%) Frame = +2 Query 2 QEFGTRSRAHIYQVKNRSFCTMAAVTSAAVAIPSFTGLkagatpakasattkvatssGPM 181 QEFGTR++ Q K MA VTSA++ I LK + A+ P Sbjct 20 QEFGTRNQ----QTK------MATVTSASIKIQLSPLLKTTSRLTTATFKPT------PK 63 Query 182 LSIKASLKDVGvavaataasailasnalaiEVKLGGDDGELAFVPSDFSVSA 337 +IKASLKD GVAVAATAASA++ASNA+AI+V LGGDDG LAF+P +F V+A Sbjct 64 FAIKASLKDFGVAVAATAASALIASNAMAIDVLLGGDDGSLAFIPGNFEVAA 115 >gi|17369634|sp|Q9SXW9|PLAS_PHYPA Plastocyanin, chloroplast precursor gi|4757375|dbj|BAA77274.1| UniGene info plastocyanin precursor [Physcomitrella patens] Length=168 Score = 45.4 bits (106), Expect = 6e-05 Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 3/94 (3%) Frame = +2 Query 65 MAAVTSAAVAIPSFTGLkagatpakasattkvatssGPMLSIKAS---LKDVGvavaata 235 MA+V +AAV++ SF+GLKA A A ++ P++ AS LK VG A+ A + Sbjct 1 MASVAAAAVSVSSFSGLKAETKAAPARLSSTSVVRMAPVVRASASSDALKTVGKALLAAS 60 Query 236 asailasnalaiEVKLGGDDGELAFVPSDFSVSA 337 +S +L ++A A VK+GGDDG L F P D SV+A Sbjct 61 SSLLLVASANAATVKMGGDDGALGFYPKDISVAA 94 >gi|130265|sp|P00292|PLAS_CUCPE Plastocyanin Length=99 Score = 39.7 bits (91), Expect = 0.003 Identities = 17/22 (77%), Positives = 20/22 (90%), Gaps = 0/22 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVSA 337 EV LGGDDG LAF+P+DFSV+A Sbjct 2 EVLLGGDDGSLAFIPNDFSVAA 23 >gi|130279|sp|P00298|PLAS_RUMOB Plastocyanin Length=99 Score = 38.1 bits (87), Expect = 0.009 Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 0/22 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVSA 337 E+KLGGDDG LAFVP F+V+A Sbjct 2 EIKLGGDDGALAFVPGSFTVAA 23 >gi|223146|prf||0512260A plastocyanin Length=99 Score = 38.1 bits (87), Expect = 0.009 Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 0/22 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVSA 337 E+KLGGDDG LAFVP F+V+A Sbjct 2 EIKLGGDDGALAFVPGSFTVAA 23 >gi|82407305|pdb|1TEF|A Related structures Chain A, Crystal Structure Of The Spinach Plastocyanin Mutants G8dK30CT69C AND K30CT69C- A Study Of The Effect On Crystal Packing And Thermostability From The Introduction Of A Novel Disulfide Bond gi|82407306|pdb|1TEF|B Related structures Chain B, Crystal Structure Of The Spinach Plastocyanin Mutants G8dK30CT69C AND K30CT69C- A Study Of The Effect On Crystal Packing And Thermostability From The Introduction Of A Novel Disulfide Bond Length=99 Score = 37.4 bits (85), Expect = 0.016 Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 0/22 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVSA 337 EV LGGDDG LAF+P DFSV++ Sbjct 2 EVLLGGDDGSLAFLPGDFSVAS 23 >gi|130284|sp|P00296|PLAS_SOLTU Plastocyanin Length=99 Score = 37.4 bits (85), Expect = 0.016 Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 0/22 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVSA 337 +V LGGDDG LAF+P +FSVSA Sbjct 2 DVLLGGDDGSLAFIPGNFSVSA 23 >gi|3891757|pdb|1AG6| Related structures Chain , Plastocyanin From Spinach Length=99 Score = 37.4 bits (85), Expect = 0.016 Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 0/22 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVSA 337 EV LGGDDG LAF+P DFSV++ Sbjct 2 EVLLGGDDGSLAFLPGDFSVAS 23 >gi|3024399|sp|P56274|PLAS_ULVPE Plastocyanin gi|2392379|pdb|1IUZ| Related structures Chain , Plastocyanin Length=98 Score = 37.0 bits (84), Expect = 0.021 Identities = 17/21 (80%), Positives = 18/21 (85%), Gaps = 0/21 (0%) Frame = +2 Query 275 VKLGGDDGELAFVPSDFSVSA 337 VKLGGDDG LAFVPS SV+A Sbjct 4 VKLGGDDGSLAFVPSKISVAA 24 >gi|130287|sp|P13133|PLAS_ULVAR Plastocyanin Length=98 Score = 36.6 bits (83), Expect = 0.027 Identities = 17/21 (80%), Positives = 18/21 (85%), Gaps = 0/21 (0%) Frame = +2 Query 275 VKLGGDDGELAFVPSDFSVSA 337 VKLGGDDG LAFVPS SV+A Sbjct 4 VKLGGDDGALAFVPSKISVAA 24 >gi|40455718|gb|AAR85968.1| UniGene info ERT10 [Nicotiana tabacum] Length=106 Score = 35.8 bits (81), Expect = 0.046 Identities = 17/22 (77%), Positives = 18/22 (81%), Gaps = 0/22 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVSA 337 EV LG DDG LAFVP +FSVSA Sbjct 10 EVLLGSDDGGLAFVPGNFSVSA 31 >gi|548525|sp|P35476|PLAS1_TOBAC Plastocyanin A'/A'' gi|544646|gb|AAB29408.1| b-plastocyanin, PCb(II) [Nicotiana tabacum=tobacco, var. Virginia, whole leaves, Peptide, 99 aa] Length=99 Score = 35.8 bits (81), Expect = 0.046 Identities = 17/22 (77%), Positives = 18/22 (81%), Gaps = 0/22 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVSA 337 EV LG DDG LAFVP +FSVSA Sbjct 2 EVLLGSDDGGLAFVPGNFSVSA 23 >gi|548526|sp|P35477|PLAS2_TOBAC Plastocyanin B'/B'' gi|544647|gb|AAB29409.1| a-plastocyanin, PCa(I) [Nicotiana tabacum=tobacco, var. Virginia, whole leaves, Peptide, 99 aa] Length=99 Score = 35.8 bits (81), Expect = 0.046 Identities = 17/22 (77%), Positives = 18/22 (81%), Gaps = 0/22 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVSA 337 EV LG DDG LAFVP +FSVSA Sbjct 2 EVLLGSDDGGLAFVPGNFSVSA 23 >gi|130266|sp|P00293|PLAS_CUCSA Plastocyanin gi|223787|prf||0911298A plastocyanin Length=99 Score = 35.4 bits (80), Expect = 0.060 Identities = 14/22 (63%), Positives = 20/22 (90%), Gaps = 0/22 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVSA 337 E+ LGGDDG LAFVP++F+V++ Sbjct 2 EILLGGDDGSLAFVPNNFTVAS 23 >gi|230657|pdb|2PCY| Related structures Chain , Apo-Plastocyanin (pH 6.0) gi|230906|pdb|3PCY| Related structures Chain , Plastocyanin (Hg2+ Substituted) gi|231056|pdb|4PCY| Related structures Chain , Plastocyanin (Cross-Linked With Gluteraldehyde, Cu1+, pH 7.8) gi|231167|pdb|5PCY| Related structures Chain , Plastocyanin (Cu1+,pH 7.0) gi|231224|pdb|6PCY| Related structures Chain , Plastocyanin (Cu1+,pH 3.8) gi|443184|pdb|1PLC| Related structures Chain , Plastocyanin (Cu2+, Ph 6.0) gi|494450|pdb|1PNC| Related structures Chain , Plastocyanin (Prolsq Refinement) gi|494451|pdb|1PND| Related structures Chain , Plastocyanin (Eref Refinement) gi|67463832|pdb|1TKW|A Related structures Chain A, The Transient Complex Of Poplar Plastocyanin With Turnip Cytochrome F Determined With Paramagnetic Nmr Length=99 Score = 35.4 bits (80), Expect = 0.060 Identities = 15/21 (71%), Positives = 18/21 (85%), Gaps = 0/21 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVS 334 +V LG DDG LAFVPS+FS+S Sbjct 2 DVLLGADDGSLAFVPSEFSIS 22 >gi|225877|prf||1402239A plastocyanin b Length=99 Score = 35.4 bits (80), Expect = 0.060 Identities = 16/22 (72%), Positives = 18/22 (81%), Gaps = 0/22 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVSA 337 +V LG DDG LAFVPS+FSV A Sbjct 2 DVLLGADDGSLAFVPSEFSVPA 23 >gi|130262|sp|P00294|PLAS_CAPBU Plastocyanin gi|223148|prf||0512262A plastocyanin Length=99 Score = 35.4 bits (80), Expect = 0.060 Identities = 15/21 (71%), Positives = 18/21 (85%), Gaps = 0/21 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVS 334 EV LGG DG LAFVP+DFS++ Sbjct 2 EVLLGGGDGSLAFVPNDFSIA 22 >gi|130283|sp|P00297|PLAS_SOLCR Plastocyanin gi|223147|prf||0512261A plastocyanin Length=99 Score = 35.4 bits (80), Expect = 0.060 Identities = 16/22 (72%), Positives = 18/22 (81%), Gaps = 0/22 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVSA 337 EV LG DDG LAFVP +FS+SA Sbjct 2 EVLLGSDDGGLAFVPGNFSISA 23 >gi|130268|sp|P07465|PLAS_ENTPR Plastocyanin gi|231267|pdb|7PCY| Related structures Chain , Plastocyanin Length=98 Score = 35.0 bits (79), Expect = 0.079 Identities = 15/21 (71%), Positives = 18/21 (85%), Gaps = 0/21 (0%) Frame = +2 Query 275 VKLGGDDGELAFVPSDFSVSA 337 VKLGGDDG LAFVP++ +V A Sbjct 4 VKLGGDDGSLAFVPNNITVGA 24 >gi|130280|sp|P00291|PLAS_SAMNI Plastocyanin Length=99 Score = 35.0 bits (79), Expect = 0.079 Identities = 14/20 (70%), Positives = 18/20 (90%), Gaps = 0/20 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSV 331 E+ LGG+DG LAF+PS+FSV Sbjct 2 EILLGGEDGSLAFIPSNFSV 21 >gi|48526878|gb|AAT45616.1| plastocyanin precursor [Ulva pertusa] Length=139 Score = 34.7 bits (78), Expect = 0.10 Identities = 15/21 (71%), Positives = 18/21 (85%), Gaps = 0/21 (0%) Frame = +2 Query 275 VKLGGDDGELAFVPSDFSVSA 337 VKLGGDDG LAFVP+ +V+A Sbjct 45 VKLGGDDGSLAFVPNKITVAA 65 >gi|82407307|pdb|1TEG|A Related structures Chain A, Crystal Structure Of The Spinach Plastocyanin Mutants G8dK30CT69C AND K30CT69C- A Study Of The Effect On Crystal Packing And Thermostability From The Introduction Of A Novel Disulfide Bond gi|82407308|pdb|1TEG|B Related structures Chain B, Crystal Structure Of The Spinach Plastocyanin Mutants G8dK30CT69C AND K30CT69C- A Study Of The Effect On Crystal Packing And Thermostability From The Introduction Of A Novel Disulfide Bond Length=99 Score = 34.7 bits (78), Expect = 0.10 Identities = 15/22 (68%), Positives = 18/22 (81%), Gaps = 0/22 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVSA 337 EV LGG DG LAF+P DFSV++ Sbjct 2 EVLLGGGDGSLAFLPGDFSVAS 23 >gi|46015034|pdb|1OOW|A Related structures Chain A, The Crystal Structure Of The Spinach Plastocyanin Double Mutant G8dL12E GIVES INSIGHT INTO ITS LOW REACTIVITY Towards Photosystem 1 And Cytochrome F Length=99 Score = 34.7 bits (78), Expect = 0.10 Identities = 15/22 (68%), Positives = 18/22 (81%), Gaps = 0/22 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVSA 337 EV LGGDDG AF+P DFSV++ Sbjct 2 EVLLGGDDGSEAFLPGDFSVAS 23 >gi|130272|sp|P00295|PLAS_MERPE Plastocyanin Length=99 Score = 34.7 bits (78), Expect = 0.10 Identities = 15/20 (75%), Positives = 18/20 (90%), Gaps = 0/20 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSV 331 +V LG DDGELAFVP++FSV Sbjct 2 DVLLGSDDGELAFVPNNFSV 21 >gi|3114360|pdb|2PCF|A Related structures Chain A, The Complex Of Cytochrome F And Plastocyanin Determined With Paramagnetic Nmr. Based On The Structures Of Cytochrome F And Plastocyanin, 10 Structures gi|62738655|pdb|1YLB|B Related structures Chain B, Nmr Solution Structure Of The Reduced Spinach Plastocyanin Length=99 Score = 34.7 bits (78), Expect = 0.10 Identities = 15/22 (68%), Positives = 18/22 (81%), Gaps = 0/22 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVSA 337 EV LGG DG LAF+P DFSV++ Sbjct 2 EVLLGGGDGSLAFLPGDFSVAS 23 >gi|18158977|pdb|1JXG|A Related structures Chain A, The 1.6 A Resolution Crystal Structure Of A Mutant Poplar Plastocyanin Bearing A 21-25 Engeneered Disulfide Bridge gi|18158978|pdb|1JXG|B Related structures Chain B, The 1.6 A Resolution Crystal Structure Of A Mutant Poplar Plastocyanin Bearing A 21-25 Engeneered Disulfide Bridge Length=100 Score = 33.9 bits (76), Expect = 0.18 Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 0/21 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVS 334 +V LG DDG LAFVPS+FS S Sbjct 3 DVLLGADDGSLAFVPSEFSCS 23 >gi|223149|prf||0512262B plastocyanin Length=99 Score = 33.5 bits (75), Expect = 0.23 Identities = 14/22 (63%), Positives = 19/22 (86%), Gaps = 0/22 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVSA 337 +V LG DDG LAFVP++FS++A Sbjct 2 DVLLGSDDGGLAFVPNNFSIAA 23 >gi|130276|sp|P17341|PLAS_PETCR Plastocyanin A/B gi|640354|pdb|1PLA| Related structures Chain , Plastocyanin (Nmr, 30 Structures) gi|640355|pdb|1PLB| Related structures Chain , Plastocyanin (Nmr, Minimized Average Structure) gi|226911|prf||1611235A plastocyanin a/b Length=97 Score = 33.5 bits (75), Expect = 0.23 Identities = 15/22 (68%), Positives = 17/22 (77%), Gaps = 0/22 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVSA 337 EVKLG DDG L F PS F+V+A Sbjct 2 EVKLGSDDGGLVFSPSSFTVAA 23 >gi|130267|sp|P20422|PLAS_DAUCA Plastocyanin Length=97 Score = 33.5 bits (75), Expect = 0.23 Identities = 15/21 (71%), Positives = 16/21 (76%), Gaps = 0/21 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVS 334 EVKLG DDG L F PS FSV+ Sbjct 2 EVKLGADDGALVFSPSSFSVA 22 >gi|6435665|pdb|1BYO|A Related structures Chain A, Wild-Type Plastocyanin From Silene gi|6435666|pdb|1BYO|B Related structures Chain B, Wild-Type Plastocyanin From Silene Length=99 Score = 32.0 bits (71), Expect = 0.67 Identities = 14/22 (63%), Positives = 17/22 (77%), Gaps = 0/22 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVSA 337 EV LG DG LAFVPSD S+++ Sbjct 2 EVLLGSSDGGLAFVPSDLSIAS 23 >gi|130288|sp|P00288|PLAS_VICFA Plastocyanin Length=99 Score = 32.0 bits (71), Expect = 0.67 Identities = 15/22 (68%), Positives = 16/22 (72%), Gaps = 0/22 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVSA 337 EV LG DG LAFVP+ F VSA Sbjct 2 EVLLGASDGGLAFVPNSFEVSA 23 >gi|6435642|pdb|1BYP|A Related structures Chain A, E43k,D44k Double Mutant Plastocyanin From Silene Length=99 Score = 32.0 bits (71), Expect = 0.67 Identities = 14/22 (63%), Positives = 17/22 (77%), Gaps = 0/22 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSVSA 337 EV LG DG LAFVPSD S+++ Sbjct 2 EVLLGSSDGGLAFVPSDLSIAS 23 >gi|130277|sp|P00287|PLAS_PHAVU Plastocyanin Length=99 Score = 31.2 bits (69), Expect = 1.1 Identities = 14/20 (70%), Positives = 15/20 (75%), Gaps = 0/20 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSV 331 EV LG DG L FVPS+FSV Sbjct 2 EVLLGSGDGSLVFVPSEFSV 21 >gi|1421476|pdb|9PCY| Related structures Chain , Plastocyanin (Reduced Form) (Nmr, 16 Structures) Length=99 Score = 31.2 bits (69), Expect = 1.1 Identities = 14/20 (70%), Positives = 15/20 (75%), Gaps = 0/20 (0%) Frame = +2 Query 272 EVKLGGDDGELAFVPSDFSV 331 EV LG DG L FVPS+FSV Sbjct 2 EVLLGSGDGSLVFVPSEFSV 21
  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 171
Number of extensions: 0
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 338
Length of database: 101054579
Length adjustment: 80
Effective length of query: 258
Effective length of database: 78386659
Effective search space: 2508373088
Effective search space used: 2508373088
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)