Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168943537-31020-118750050684.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig197 Length=355
Score E Sequences producing significant alignments: (Bits) Value gi|4091806|gb|AAC99310.1| CONSTANS-like protein 2 [Malus x domes 142 3e-34 gi|4091804|gb|AAC99309.1| CONSTANS-like protein 1 [Malus x domes 138 7e-33 gi|30689668|ref|NP_197875.2| transcription factor/ zinc ion bind 119 3e-27 gi|52840166|sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LI 119 3e-27 gi|15450659|gb|AAK96601.1| AT5g24930/F6A4_140 [Arabidopsis th... 106 2e-23 gi|92875402|gb|ABE83395.1| Zinc finger, B-box; CCT [Medicago tru 82.4 4e-16 gi|61611682|gb|AAX47173.1| CONSTANS-LIKE b [Pisum sativum] 75.9 4e-14 gi|60459257|gb|AAX20015.1| CONSTANS-like b [Pisum sativum] 75.9 4e-14 gi|3341723|gb|AAC35496.1| CONSTANS-like 1 protein [Raphanus sati 70.9 1e-12 gi|111378451|gb|ABH09237.1| CONSTANS-like protein [Solanum tuber 61.6 8e-10 gi|21594050|gb|AAM65968.1| CONSTANS-like B-box zinc finger pr... 58.5 7e-09 gi|18424009|ref|NP_568863.1| transcription factor/ zinc ion b... 58.5 7e-09 gi|9759262|dbj|BAB09583.1| CONSTANS-like B-box zinc finger pr... 58.5 7e-09 gi|42570913|ref|NP_973530.1| zinc ion binding [Arabidopsis thali 44.7 1e-04 gi|21553854|gb|AAM62947.1| zinc finger protein constans-like 8 [ 44.7 1e-04 gi|15224620|ref|NP_180052.1| transcription factor/ zinc ion b... 44.7 1e-04 gi|35187151|gb|AAQ84234.1| constans-like protein [Brassica rapa] 43.1 3e-04 gi|90657642|gb|ABD96940.1| hypothetical protein [Cleome spinosa] 42.7 4e-04 gi|21667485|gb|AAM74069.1|AF490474_1 CONSTANS-like protein [H... 42.0 7e-04 gi|116310719|emb|CAH67516.1| OSIGBa0092E01.11 [Oryza sativa (ind 41.6 9e-04 gi|106636023|gb|ABF82229.1| constans-like 1 protein [Brassica ju 41.6 9e-04 gi|35187149|gb|AAQ84233.1| constans-like protein [Brassica rapa] 41.6 9e-04 gi|85068129|gb|ABC69350.1| constans-like [Brassica napus] 41.6 9e-04 gi|30984027|gb|AAP42647.1| constans-like protein [Brassica napus 41.6 9e-04 gi|115459216|ref|NP_001053208.1| Os04g0497700 [Oryza sativa (... 41.6 9e-04 gi|21655154|gb|AAL99264.1| CONSTANS-like protein CO5 [Hordeum vu 38.1 0.009 gi|116010474|emb|CAL29796.1| CONSTANS-like1 protein [Brassica... 37.7 0.012 gi|22854940|gb|AAN09825.1| COL1 protein [Brassica nigra] 37.0 0.021 gi|22854920|gb|AAN09815.1| COL1 protein [Brassica nigra] >gi|... 37.0 0.021 gi|22854924|gb|AAN09817.1| COL1 protein [Brassica nigra] 37.0 0.021 gi|22854966|gb|AAN09838.1| COL1 protein [Brassica nigra] 37.0 0.021 gi|22854950|gb|AAN09830.1| COL1 protein [Brassica nigra] 37.0 0.021 gi|22854910|gb|AAN09810.1| COL1 protein [Brassica nigra] 36.6 0.027 gi|22854916|gb|AAN09813.1| COL1 protein [Brassica nigra] 36.6 0.027 gi|22854906|gb|AAN09808.1| COL1 protein [Brassica nigra] >gi|... 36.6 0.027 gi|22854908|gb|AAN09809.1| COL1 protein [Brassica nigra] 36.6 0.027 gi|15242403|ref|NP_197089.1| COL1 (CONSTANS-LIKE 1); transcri... 36.6 0.027 gi|41323976|gb|AAS00054.1| CONSTANS-like protein CO1 [Populus de 35.8 0.047 gi|41323978|gb|AAS00055.1| CONSTANS-like protein CO2 [Populus de 35.8 0.047 gi|22854946|gb|AAN09828.1| COL1 protein [Brassica nigra] 35.4 0.061 gi|11037311|gb|AAG27547.1| constans-like protein [Brassica ni... 35.4 0.061 gi|22854934|gb|AAN09822.1| COL1 protein [Brassica nigra] 34.7 0.10 gi|22854930|gb|AAN09820.1| COL1 protein [Brassica nigra] >gi|... 34.7 0.10 gi|22854972|gb|AAN09841.1| COL1 protein [Brassica nigra] 34.7 0.10 gi|22854928|gb|AAN09819.1| COL1 protein [Brassica nigra] 34.7 0.10 gi|22854982|gb|AAN09846.1| COL1 protein [Brassica nigra] 34.7 0.10 gi|22854942|gb|AAN09826.1| COL1 protein [Brassica nigra] 33.9 0.18 gi|73665596|gb|AAZ79498.1| CONSTANT-like protein [Musa x paradis 33.9 0.18 gi|15232898|ref|NP_186887.1| COL2 (CONSTANS-LIKE 2); transcri... 33.9 0.18 gi|22854952|gb|AAN09831.1| COL1 protein [Brassica nigra] 33.1 0.30 gi|82879857|gb|ABB92565.1| peroxisomal import receptor PTS1 [Bra 33.1 0.30 gi|3582779|gb|AAC69180.1| peroxisomal targeting sequence 1 recep 32.7 0.40 gi|3582781|gb|AAC69181.1| peroxisomal targeting sequence 1 recep 32.7 0.40 gi|3806016|gb|AAC69177.1| peroxisomal targeting signal 1 rece... 32.7 0.40 gi|115477114|ref|NP_001062153.1| Os08g0500100 [Oryza sativa (... 32.3 0.52 gi|42407350|dbj|BAD08811.1| putative peroxisomal targeting si... 32.3 0.52 gi|66841018|emb|CAI64584.1| CONSTANS-like 2 [Physcomitrella pate 32.0 0.68 gi|22854986|gb|AAN09848.1| COL1 protein [Brassica nigra] 32.0 0.68 gi|3193234|gb|AAC97489.1| peroxisomal targeting signal-1 recepto 32.0 0.68 gi|59895529|gb|AAX11256.1| peroxisomal targeting signal 1 rec... 32.0 0.68 gi|59895527|gb|AAX11255.1| peroxisomal targeting signal 1 rec... 32.0 0.68 gi|15241175|ref|NP_200440.1| PEX5; peroxisome targeting signa... 30.8 1.5 gi|3603353|gb|AAC62012.1| peroxisomal targeting signal type 1... 30.8 1.5 gi|61611678|gb|AAX47172.1| CONSTANS-LIKE a [Pisum sativum] 30.0 2.6 gi|60678530|gb|AAX33627.1| CONSTANS-like protein [Pisum sativum] 30.0 2.6 gi|11037313|gb|AAG27548.1| COL2-like protein [Brassica nigra] 30.0 2.6 gi|115447239|ref|NP_001047399.1| Os02g0610500 [Oryza sativa (... 30.0 2.6 gi|92881325|gb|ABE86168.1| Pyridine nucleotide-disulphide oxi... 29.3 4.4 gi|28564577|dbj|BAC57686.1| P0483E09.5 [Oryza sativa (japonic... 29.3 4.4 gi|45544881|gb|AAS67376.1| CONSTANS 1 [Lycopersicon esculentu... 28.9 5.7 gi|94323375|gb|ABF17844.1| CONSTANS [Solanum tuberosum] 28.5 7.5 gi|48475247|gb|AAT44316.1| hypothetical protein [Oryza sativa (j 28.5 7.5 gi|38347289|emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa (japo 28.5 7.5 gi|13124867|gb|AAK11735.1| starch associated protein R1 [Solanum 28.5 7.5 gi|115444233|ref|NP_001045896.1| Os02g0149600 [Oryza sativa (... 28.5 7.5 gi|116055664|emb|CAL57749.1| unnamed protein product [Ostreococc 28.1 9.8 gi|95115497|gb|ABF56054.1| CONSTANS [Solanum demissum] 28.1 9.8 gi|21667471|gb|AAM74062.1|AF490467_1 CONSTANS-like protein [H... 28.1 9.8 gi|22748329|gb|AAN05331.1| Hypothetical protein [Oryza sativa... 28.1 9.8 gi|115469296|ref|NP_001058247.1| Os06g0654900 [Oryza sativa (... 28.1 9.8
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 317 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 355 Length of database: 101054579 Length adjustment: 85 Effective length of query: 270 Effective length of database: 76969914 Effective search space: 2540007162 Effective search space used: 2540007162 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)