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BLASTX 2.2.15 [Oct-15-2006] 
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168943569-1291-160173621642.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs
Taxonomy reports

Query=  Contig199
Length=395

Distribution of 9 Blast Hits on the Query Sequence


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|92873428|gb|ABE81883.1|  tRNA synthetase, class II (G, H, P an  59.7    3e-09
gi|15228692|ref|NP_191771.1|  ATP binding / proline-tRNA ligas...  58.9    5e-09 UniGene infoGene info
gi|115488440|ref|NP_001066707.1|  Os12g0443700 [Oryza sativa (...  56.2    3e-08 Gene info
gi|77554943|gb|ABA97739.1|  Bifunctional aminoacyl-tRNA synthe...  56.2    3e-08
gi|77554944|gb|ABA97740.1|  Bifunctional aminoacyl-tRNA synthe...  56.2    3e-08
gi|15238286|ref|NP_196649.1|  ATP binding / tRNA ligase [Arabi...  49.7    3e-06 UniGene infoGene info
gi|32140555|dbj|BAC78194.1|  prolyl-tRNA synthetase [Raphanus sat  43.5    2e-04
gi|86553036|gb|ABC98216.1|  NADH dehydrogenase subunit 6 [Chlamyd  28.1    9.6  
gi|11467094|ref|NP_042569.1|  NADH dehydrogenase subunit 6 [Ch...  28.1    9.6   Gene info
Alignments

>gi|92873428|gb|ABE81883.1|  tRNA synthetase, class II (G, H, P and S) [Medicago truncatula]
Length=488

 Score = 59.7 bits (143),  Expect = 3e-09
 Identities = 24/28 (85%), Positives = 26/28 (92%), Gaps = 0/28 (0%)
 Frame = -2

Query  394  PFEQPELPEGTKCFASGKPAKKWTYXGQ  311
            PF+QPELPEGTKCF SGKPAKKWTY G+
Sbjct  459  PFDQPELPEGTKCFKSGKPAKKWTYWGR  486


>gi|15228692|ref|NP_191771.1| UniGene infoGene info ATP binding / proline-tRNA ligase/ tRNA ligase [Arabidopsis thaliana]
 gi|30695549|ref|NP_850736.1| UniGene infoGene info ATP binding / proline-tRNA ligase/ tRNA ligase [Arabidopsis thaliana]
 gi|6899922|emb|CAB71872.1| Gene info multifunctional aminoacyl-tRNA ligase-like protein [Arabidopsis 
thaliana]
 gi|16648885|gb|AAL24294.1| UniGene infoGene info multifunctional aminoacyl-tRNA ligase-like protein [Arabidopsis 
thaliana]
 gi|22136084|gb|AAM91120.1| UniGene infoGene info multifunctional aminoacyl-tRNA ligase-like protein [Arabidopsis 
thaliana]
Length=530

 Score = 58.9 bits (141),  Expect = 5e-09
 Identities = 24/28 (85%), Positives = 26/28 (92%), Gaps = 0/28 (0%)
 Frame = -2

Query  394  PFEQPELPEGTKCFASGKPAKKWTYXGQ  311
            PF+QPELPEGT CFASGKPAKKWTY G+
Sbjct  501  PFDQPELPEGTLCFASGKPAKKWTYWGR  528


>gi|115488440|ref|NP_001066707.1| Gene info Os12g0443700 [Oryza sativa (japonica cultivar-group)]
 gi|113649214|dbj|BAF29726.1| Gene info Os12g0443700 [Oryza sativa (japonica cultivar-group)]
Length=515

 Score = 56.2 bits (134),  Expect = 3e-08
 Identities = 22/28 (78%), Positives = 26/28 (92%), Gaps = 0/28 (0%)
 Frame = -2

Query  394  PFEQPELPEGTKCFASGKPAKKWTYXGQ  311
            PFEQP+LPEGT CFASGKPAKKW++ G+
Sbjct  486  PFEQPDLPEGTTCFASGKPAKKWSFWGR  513


>gi|77554943|gb|ABA97739.1|  Bifunctional aminoacyl-tRNA synthetase, putative, expressed [Oryza 
sativa (japonica cultivar-group)]
Length=510

 Score = 56.2 bits (134),  Expect = 3e-08
 Identities = 22/28 (78%), Positives = 26/28 (92%), Gaps = 0/28 (0%)
 Frame = -2

Query  394  PFEQPELPEGTKCFASGKPAKKWTYXGQ  311
            PFEQP+LPEGT CFASGKPAKKW++ G+
Sbjct  481  PFEQPDLPEGTTCFASGKPAKKWSFWGR  508


>gi|77554944|gb|ABA97740.1|  Bifunctional aminoacyl-tRNA synthetase, putative, expressed [Oryza 
sativa (japonica cultivar-group)]
Length=489

 Score = 56.2 bits (134),  Expect = 3e-08
 Identities = 22/28 (78%), Positives = 26/28 (92%), Gaps = 0/28 (0%)
 Frame = -2

Query  394  PFEQPELPEGTKCFASGKPAKKWTYXGQ  311
            PFEQP+LPEGT CFASGKPAKKW++ G+
Sbjct  460  PFEQPDLPEGTTCFASGKPAKKWSFWGR  487


>gi|15238286|ref|NP_196649.1| UniGene infoGene info ATP binding / tRNA ligase [Arabidopsis thaliana]
 gi|8979722|emb|CAB96843.1| Gene info putative protein [Arabidopsis thaliana]
Length=309

 Score = 49.7 bits (117),  Expect = 3e-06
 Identities = 21/28 (75%), Positives = 23/28 (82%), Gaps = 0/28 (0%)
 Frame = -2

Query  394  PFEQPELPEGTKCFASGKPAKKWTYXGQ  311
            P EQPEL E T CFASGKPAKKW+Y G+
Sbjct  280  PLEQPELGEETLCFASGKPAKKWSYWGR  307


>gi|32140555|dbj|BAC78194.1|  prolyl-tRNA synthetase [Raphanus sativus]
Length=220

 Score = 43.5 bits (101),  Expect = 2e-04
 Identities = 18/19 (94%), Positives = 18/19 (94%), Gaps = 0/19 (0%)
 Frame = -2

Query  394  PFEQPELPEGTKCFASGKP  338
            PFEQPELPEGT CFASGKP
Sbjct  202  PFEQPELPEGTLCFASGKP  220


>gi|86553036|gb|ABC98216.1|  NADH dehydrogenase subunit 6 [Chlamydomonas incerta]
Length=162

 Score = 28.1 bits (61),  Expect = 9.6
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
 Frame = -3

Query  246  SAVLVCLXTILNMAIFHXKIVIAILMTIVSVLL--SYCYKLLGFLFLARVFLL  94
            SA+L+C   +L++A+ + K     LM  V + +  S+   +LGF FLA V LL
Sbjct  6    SAILLC--ALLSIAVGYTKSPFMSLMYSVMLFINSSFVLMMLGFEFLALVNLL  56


>gi|11467094|ref|NP_042569.1| Gene info NADH dehydrogenase subunit 6 [Chlamydomonas reinhardtii]
 gi|128811|sp|P10329|NU6M_CHLRE Gene info NADH-ubiquinone oxidoreductase chain 6 (NADH dehydrogenase subunit 
6)
 gi|12507|emb|CAA38644.1| Gene info mitochondrial NADH dehydrogenase subunit 6 [Chlamydomonas reinhardtii]
 gi|563697|gb|AAB93445.1| Gene info NADH dehydrogenase subunit 6 [Chlamydomonas reinhardtii]
Length=162

 Score = 28.1 bits (61),  Expect = 9.6
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
 Frame = -3

Query  246  SAVLVCLXTILNMAIFHXKIVIAILMTIVSVLL--SYCYKLLGFLFLARVFLL  94
            SA+L+C   +L++A+ + K     LM  V + +  S+   +LGF FLA V LL
Sbjct  6    SAILLC--ALLSIAVGYTKSPFMSLMYSVMLFINSSFVLMMLGFEFLALVNLL  56







  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 207
Number of extensions: 1
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 395
Length of database: 101054579
Length adjustment: 97
Effective length of query: 298
Effective length of database: 73569726
Effective search space: 2501370684
Effective search space used: 2501370684
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)