Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168943586-23069-136176729378.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig200 Length=357
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|12644431|sp|Q39242|TRXB2_ARATH Thioredoxin reductase 2 (NA... 90.5 2e-26 gi|79557518|ref|NP_179334.4| NTRA [Arabidopsis thaliana] 90.5 2e-26 gi|110741056|dbj|BAE98622.1| putative thioredoxin reductase [Ara 90.5 2e-26 gi|468524|emb|CAA80655.1| NADPH thioredoxin reductase [Arabidops 90.5 2e-26 gi|20466580|gb|AAM20607.1| putative thioredoxin reductase [Arabi 90.5 2e-26 gi|42567414|ref|NP_195271.2| NTR1 [Arabidopsis thaliana] 92.0 4e-25 gi|28393819|gb|AAO42318.1| putative thioredoxin reductase (NADPH 92.0 4e-25 gi|12644432|sp|Q39243|TRXB1_ARATH Thioredoxin reductase 1 (NA... 92.0 4e-25 gi|1942055|pdb|1VDC| Chain , Structure Of Nadph Dependent Thio 90.5 6e-24 gi|468526|emb|CAA80656.1| Thioredoxin reductase [Arabidopsis tha 81.6 2e-21 gi|115448263|ref|NP_001047911.1| Os02g0713400 [Oryza sativa (... 83.2 2e-20 gi|17826833|emb|CAD19162.1| NADPH-thioredoxin reductase [Triticu 82.8 1e-19 gi|115467864|ref|NP_001057531.1| Os06g0327300 [Oryza sativa (... 84.0 3e-19 gi|50725984|dbj|BAD33510.1| putative NADPH-thioredoxin reduct... 84.0 3e-19 gi|115473833|ref|NP_001060515.1| Os07g0657900 [Oryza sativa (... 67.0 2e-11 gi|18405775|ref|NP_565954.1| disulfide oxidoreductase/ electr... 66.6 2e-11 gi|15912233|gb|AAL08250.1| At2g41680/T32G6.20 [Arabidopsis th... 66.6 2e-11 gi|116055939|emb|CAL58472.1| Pyridine nucleotide-disulphide o... 62.4 4e-11 gi|13957644|gb|AAK50599.1|AC084404_24 hypothetical protein [Oryz 33.5 0.23 gi|55297316|dbj|BAD69145.1| hypothetical protein [Oryza sativa ( 33.5 0.23 gi|30688552|ref|NP_189326.2| unknown protein [Arabidopsis tha... 31.6 0.88 gi|79313786|ref|NP_001030778.1| unknown protein [Arabidopsis tha 31.6 0.88 gi|9279681|dbj|BAB01238.1| unnamed protein product [Arabidopsis 31.6 0.88 gi|115485603|ref|NP_001067945.1| Os11g0502700 [Oryza sativa (... 30.8 1.5 gi|77554308|gb|ABA97104.1| retrotransposon protein, putative,... 30.4 2.0 gi|46390298|dbj|BAD15747.1| hypothetical protein [Oryza sativ... 30.4 2.0 gi|48716488|dbj|BAD23094.1| hypothetical protein [Oryza sativ... 30.0 2.6 gi|15240947|ref|NP_198672.1| ATP binding / kinase/ protein ki... 29.6 3.3 gi|115445079|ref|NP_001046319.1| Os02g0220700 [Oryza sativa (... 29.3 4.4 gi|115439289|ref|NP_001043924.1| Os01g0689800 [Oryza sativa (... 29.3 4.4 gi|46806492|dbj|BAD17616.1| putative MAP3K delta-1 protein ki... 29.3 4.4 gi|115472931|ref|NP_001060064.1| Os07g0573100 [Oryza sativa (... 29.3 4.4 gi|20503041|gb|AAM22729.1|AC092388_13 hypothetical protein [Oryz 28.9 5.7 gi|54291446|dbj|BAD62268.1| hypothetical protein [Oryza sativ... 28.9 5.7 gi|53792310|dbj|BAD53017.1| hypothetical protein [Oryza sativa ( 28.9 5.7 gi|52075872|dbj|BAD45818.1| hypothetical protein [Oryza sativ... 28.9 5.7 gi|77555610|gb|ABA98406.1| retrotransposon protein, putative,... 28.5 7.5 gi|55297097|dbj|BAD68741.1| hypothetical protein [Oryza sativ... 28.5 7.5 gi|115479097|ref|NP_001063142.1| Os09g0408600 [Oryza sativa (... 28.5 7.5 gi|128419|sp|P11728|NO75_MEDSA Early nodulin 75 (N-75) (NGM-7... 28.5 7.5 gi|115458668|ref|NP_001052934.1| Os04g0449900 [Oryza sativa (... 28.1 9.7 gi|115481514|ref|NP_001064350.1| Os10g0324600 [Oryza sativa (... 28.1 9.7 gi|79356325|ref|NP_174461.2| DNA binding / DNA-directed RNA p... 28.1 9.7 gi|12321294|gb|AAG50715.1|AC079041_8 unknown protein [Arabidopsi 28.1 9.7 gi|15217226|gb|AAK92570.1|AC074354_4 Hypothetical protein [Oryza 28.1 9.7 gi|20372934|dbj|BAB91150.1| FtsZ [Chlamydomonas reinhardtii] 28.1 9.7
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 251 Number of extensions: 4 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 357 Length of database: 101054579 Length adjustment: 86 Effective length of query: 271 Effective length of database: 76686565 Effective search space: 2530656645 Effective search space used: 2530656645 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)