>gi|30692346|ref|NP_850903.1|  RNA binding / structural constituent of ribosome [Arabidopsis 
thaliana]
 gi|13877939|gb|AAK44047.1|AF370232_1  putative ribosomal protein S1 [Arabidopsis thaliana]
 gi|16649089|gb|AAL24396.1|  Unknown protein [Arabidopsis thaliana]
 gi|21593804|gb|AAM65771.1|  ribosomal protein S1 [Arabidopsis thaliana]
 gi|23296539|gb|AAN13122.1|  putative ribosomal protein S1 [Arabidopsis thaliana]
Length=416

 Score = 57.4 bits (137),  Expect(2) = 1e-16
 Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 4/61 (6%)
 Frame = +2

Query  20   ASLAQQFTGLRCPPLSSSG-LSMKPKQT--QRVGAFASP-IVSSVAISNAQTKGRLELKK  187
            ASLAQQF+GLRC PLSSS  LS +  +   Q   A  SP IV++VA+S+ QTK RLELKK
Sbjct  2    ASLAQQFSGLRCSPLSSSSRLSRRASKNFPQNKSASVSPTIVAAVAMSSGQTKERLELKK  61

Query  188  M  190
            M
Sbjct  62   M  62


 Score = 47.4 bits (111),  Expect(2) = 1e-16
 Identities = 20/32 (62%), Positives = 26/32 (81%), Gaps = 0/32 (0%)
 Frame = +3

Query  165  KAGLSSRKCXEEAYERCRTAPMEGVSFTLEDF  260
            K  L  +K  E+AYERCRT+PMEGV+FT++DF
Sbjct  54   KERLELKKMFEDAYERCRTSPMEGVAFTVDDF  85


>gi|133872|sp|P29344|RR1_SPIOL  30S ribosomal protein S1, chloroplast precursor (CS1)
 gi|18060|emb|CAA46927.1|  ribosomal protein S1 [Spinacia oleracea]
 gi|170143|gb|AAA34045.1|  chloroplast ribosomal protein S1
Length=411

 Score = 55.8 bits (133),  Expect(2) = 2e-15
 Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 5/60 (8%)
 Frame = +2

Query  20   ASLAQQFTG-LRCPPLSSSGLS--MKPKQTQRVGAFASPIVSSVAISNAQTKGRLELKKM  190
            ASLAQQ  G LRCPPLS+S LS    PK T +     SPIVS+VA+SNAQT+ R +LK++
Sbjct  2    ASLAQQLAGGLRCPPLSNSNLSKPFSPKHTLKPRF--SPIVSAVAVSNAQTRERQKLKQL  59


 Score = 45.1 bits (105),  Expect(2) = 2e-15
 Identities = 18/26 (69%), Positives = 23/26 (88%), Gaps = 0/26 (0%)
 Frame = +3

Query  183  RKCXEEAYERCRTAPMEGVSFTLEDF  260
            ++  E+AYERCR APMEGVSFT++DF
Sbjct  57   KQLFEDAYERCRNAPMEGVSFTIDDF  82


>gi|108707824|gb|ABF95619.1|  30S ribosomal protein S1, chloroplast precursor, putative, expressed 
[Oryza sativa (japonica cultivar-group)]
Length=402

 Score = 38.5 bits (88),  Expect(2) = 2e-04
 Identities = 17/21 (80%), Positives = 19/21 (90%), Gaps = 0/21 (0%)
 Frame = +3

Query  195  EEAYERCRTAPMEGVSFTLED  257
            +EA ERCRTAPMEGVSF+ ED
Sbjct  55   DEASERCRTAPMEGVSFSPED  75


 Score = 24.3 bits (51),  Expect(2) = 2e-04
 Identities = 11/18 (61%), Positives = 12/18 (66%), Gaps = 0/18 (0%)
 Frame = +2

Query  20  ASLAQQFTGLRCPPLSSS  73
           ASLAQ   GL  PPLS +
Sbjct  2   ASLAQHVAGLASPPLSGA  19


>gi|108707823|gb|ABF95618.1|  30S ribosomal protein S1, chloroplast precursor, putative, expressed 
[Oryza sativa (japonica cultivar-group)]
Length=380

 Score = 38.5 bits (88),  Expect(2) = 2e-04
 Identities = 17/21 (80%), Positives = 19/21 (90%), Gaps = 0/21 (0%)
 Frame = +3

Query  195  EEAYERCRTAPMEGVSFTLED  257
            +EA ERCRTAPMEGVSF+ ED
Sbjct  55   DEASERCRTAPMEGVSFSPED  75


 Score = 24.3 bits (51),  Expect(2) = 2e-04
 Identities = 11/18 (61%), Positives = 12/18 (66%), Gaps = 0/18 (0%)
 Frame = +2

Query  20  ASLAQQFTGLRCPPLSSS  73
           ASLAQ   GL  PPLS +
Sbjct  2   ASLAQHVAGLASPPLSGA  19


>gi|115452675|ref|NP_001049938.1|  Os03g0315800 [Oryza sativa (japonica cultivar-group)]
 gi|113548409|dbj|BAF11852.1|  Os03g0315800 [Oryza sativa (japonica cultivar-group)]
Length=390

 Score = 38.5 bits (88),  Expect = 0.007
 Identities = 17/21 (80%), Positives = 19/21 (90%), Gaps = 0/21 (0%)
 Frame = +3

Query  195  EEAYERCRTAPMEGVSFTLED  257
            +EA ERCRTAPMEGVSF+ ED
Sbjct  43   DEASERCRTAPMEGVSFSPED  63


>gi|49387990|dbj|BAD25108.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=329

 Score = 29.3 bits (64),  Expect = 4.4
 Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 0/24 (0%)
 Frame = -1

Query  120  AKAPTLWVCFGFIDKPEEESGGHL  49
            AK P LW   G +DK EE  GG +
Sbjct  236  AKMPWLWAMTGRVDKEEEHGGGEV  259


>gi|29837242|dbj|BAC75620.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
 gi|38175492|dbj|BAD01188.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=179

 Score = 29.3 bits (64),  Expect = 4.4
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query  213  SVHRLPRNIFLSSSLPLVCAFEI-ATDETIGEAKAPTLWVCFGFID  79
            S  +LP + FLSS  PL+ +F +  TD++ G    P  +   G  D
Sbjct  60   SKEKLPPSFFLSSMKPLMPSFSLDLTDQSWGRLPLPRFYFFMGIAD  105


>gi|77552161|gb|ABA94958.1|  BTB/POZ domain containing protein [Oryza sativa (japonica cultivar-group)]
Length=358

 Score = 28.1 bits (61),  Expect = 9.8
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 0/24 (0%)
 Frame = -1

Query  120  AKAPTLWVCFGFIDKPEEESGGHL  49
            +KA   WVC  FI++ E E  GH+
Sbjct  124  SKASDPWVCKSFIERDELEKSGHV  147