Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168942731-28289-85032216280.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig235 Length=488
Score E Sequences producing significant alignments: (Bits) Value gi|15238001|ref|NP_199517.1| unknown protein [Arabidopsis tha... 138 8e-33 gi|21594214|gb|AAM65981.1| unknown [Arabidopsis thaliana] 137 2e-32 gi|18414940|ref|NP_567534.1| unknown protein [Arabidopsis tha... 135 9e-32 gi|89257662|gb|ABD65149.1| hypothetical protein 40.t00027 [Brass 132 5e-31 gi|2245125|emb|CAB10547.1| hypothetical protein [Arabidopsis ... 131 1e-30 gi|89257542|gb|ABD65032.1| hypothetical protein 26.t00087 [Brass 112 8e-25 gi|115460164|ref|NP_001053682.1| Os04g0586000 [Oryza sativa (... 92.0 9e-19 gi|18406598|ref|NP_566023.1| unknown protein [Arabidopsis tha... 88.2 1e-17 gi|115447987|ref|NP_001047773.1| Os02g0686700 [Oryza sativa (... 88.2 1e-17 gi|116309823|emb|CAH66860.1| H0307D04.5 [Oryza sativa (indica cu 87.8 2e-17 gi|115460160|ref|NP_001053680.1| Os04g0585700 [Oryza sativa (... 87.8 2e-17 gi|41052726|dbj|BAD07583.1| hypothetical protein [Oryza sativa ( 83.2 4e-16 gi|115469958|ref|NP_001058578.1| Os06g0714800 [Oryza sativa (... 79.0 8e-15 gi|53791774|dbj|BAD53568.1| unknown protein [Oryza sativa (japon 79.0 8e-15 gi|115466098|ref|NP_001056648.1| Os06g0125200 [Oryza sativa (... 73.6 3e-13 gi|55295863|dbj|BAD67731.1| unknown protein [Oryza sativa (japon 73.6 3e-13 gi|116309824|emb|CAH66861.1| H0307D04.6 [Oryza sativa (indica cu 73.2 4e-13 gi|38344282|emb|CAE03765.2| OSJNBa0013K16.14 [Oryza sativa (japo 73.2 4e-13 gi|115447991|ref|NP_001047775.1| Os02g0687200 [Oryza sativa (... 72.0 1e-12 gi|116309831|emb|CAH66868.1| H0307D04.13 [Oryza sativa (indica c 71.6 1e-12 gi|115460168|ref|NP_001053684.1| Os04g0586200 [Oryza sativa (... 71.6 1e-12 gi|115447989|ref|NP_001047774.1| Os02g0686800 [Oryza sativa (... 71.6 1e-12 gi|115460166|ref|NP_001053683.1| Os04g0586100 [Oryza sativa (... 66.2 5e-11 gi|115460162|ref|NP_001053681.1| Os04g0585900 [Oryza sativa (... 65.9 7e-11 gi|18395081|ref|NP_564160.1| unknown protein [Arabidopsis tha... 65.9 7e-11 gi|115476360|ref|NP_001061776.1| Os08g0407600 [Oryza sativa (... 64.7 2e-10 gi|21593931|gb|AAM65894.1| unknown [Arabidopsis thaliana] 64.3 2e-10 gi|115476698|ref|NP_001061945.1| Os08g0451200 [Oryza sativa (... 63.5 3e-10 gi|18411783|ref|NP_565167.1| unknown protein [Arabidopsis tha... 63.5 3e-10 gi|115479307|ref|NP_001063247.1| Os09g0433800 [Oryza sativa (... 62.0 1e-09 gi|115434898|ref|NP_001042207.1| Os01g0180400 [Oryza sativa (... 60.5 3e-09 gi|55296303|dbj|BAD68083.1| unknown protein [Oryza sativa (japon 60.5 3e-09 gi|15239795|ref|NP_199723.1| unknown protein [Arabidopsis tha... 60.5 3e-09 gi|71834744|gb|AAZ41834.1| 80C09_23 [Brassica rapa subsp. pekine 58.9 8e-09 gi|49387664|dbj|BAD25910.1| unknown protein [Oryza sativa (ja... 58.5 1e-08 gi|115447035|ref|NP_001047297.1| Os02g0592800 [Oryza sativa (... 58.2 1e-08 gi|115467170|ref|NP_001057184.1| Os06g0223700 [Oryza sativa (... 57.8 2e-08 gi|18404687|ref|NP_564644.1| unknown protein [Arabidopsis tha... 56.6 4e-08 gi|15238322|ref|NP_201309.1| unknown protein [Arabidopsis tha... 56.6 4e-08 gi|62867601|gb|AAY17404.1| At4g39795 [Arabidopsis thaliana] >... 56.2 5e-08 gi|30692533|ref|NP_680776.2| unknown protein [Arabidopsis thalia 56.2 5e-08 gi|77552390|gb|ABA95187.1| hypothetical protein LOC_Os11g4379... 55.8 7e-08 gi|115454481|ref|NP_001050841.1| Os03g0665200 [Oryza sativa (... 55.5 9e-08 gi|21553867|gb|AAM62960.1| unknown [Arabidopsis thaliana] 55.5 9e-08 gi|92891802|gb|ABE90961.1| Protein of unknown function DUF581 [M 55.1 1e-07 gi|15242041|ref|NP_197570.1| unknown protein [Arabidopsis tha... 54.7 2e-07 gi|8954058|gb|AAF82231.1|AC069143_7 Contains similarity to a ... 54.3 2e-07 gi|15221976|ref|NP_173354.1| unknown protein [Arabidopsis thalia 54.3 2e-07 gi|15239054|ref|NP_196707.1| unknown protein [Arabidopsis tha... 53.9 3e-07 gi|115448711|ref|NP_001048135.1| Os02g0751300 [Oryza sativa (... 53.9 3e-07 gi|55296636|dbj|BAD69338.1| hypothetical protein [Oryza sativa ( 52.8 6e-07 gi|92883932|gb|ABE87128.1| Protein of unknown function DUF581 [M 52.4 8e-07 gi|52076973|dbj|BAD45983.1| hypothetical protein [Oryza sativa ( 52.0 1e-06 gi|21592506|gb|AAM64456.1| unknown [Arabidopsis thaliana] 51.6 1e-06 gi|5882729|gb|AAD55282.1|AC008263_13 ESTs gb|T04387, gb|R8402... 51.6 1e-06 gi|18410735|ref|NP_565095.1| unknown protein [Arabidopsis tha... 51.6 1e-06 gi|22331260|ref|NP_188894.2| unknown protein [Arabidopsis tha... 51.2 2e-06 gi|11994287|dbj|BAB01470.1| unnamed protein product [Arabidopsis 51.2 2e-06 gi|15225171|ref|NP_180140.1| unknown protein [Arabidopsis tha... 50.8 2e-06 gi|115482076|ref|NP_001064631.1| Os10g0422600 [Oryza sativa (... 50.4 3e-06 gi|78708662|gb|ABB47637.1| expressed protein [Oryza sativa (japo 50.4 3e-06 gi|115444541|ref|NP_001046050.1| Os02g0174800 [Oryza sativa (... 50.4 3e-06 gi|21593555|gb|AAM65522.1| unknown [Arabidopsis thaliana] 49.7 5e-06 gi|18412661|ref|NP_567143.1| MARD1 (MEDIATOR OF ABA-REGULATED... 49.7 5e-06 gi|7523403|emb|CAB86422.1| putative protein [Arabidopsis thalian 49.7 5e-06 gi|115451161|ref|NP_001049181.1| Os03g0183500 [Oryza sativa (... 49.7 5e-06 gi|22331931|gb|AAK92226.1| senescence-associated protein SAG102 49.7 5e-06 gi|33772238|gb|AAQ54554.1| putative senescence-associated pro... 48.5 1e-05 gi|92875758|gb|ABE83632.1| Protein of unknown function DUF581 [M 47.0 3e-05 gi|67633714|gb|AAY78781.1| senescence-associated protein-related 45.8 7e-05 gi|115439601|ref|NP_001044080.1| Os01g0719000 [Oryza sativa (... 45.4 1e-04 gi|57899890|dbj|BAD87760.1| unknown protein [Oryza sativa (japon 45.4 1e-04 gi|49659790|gb|AAT68207.1| unknown [Cynodon dactylon] 44.7 2e-04 gi|57900684|gb|AAW57809.1| unknown protein [Oryza sativa (japoni 43.1 5e-04 gi|115438108|ref|NP_001043459.1| Os01g0593200 [Oryza sativa (... 41.6 0.001 gi|9280684|gb|AAF86553.1|AC069252_12 F2E2.23 [Arabidopsis thalia 41.2 0.002 gi|115473343|ref|NP_001060270.1| Os07g0615500 [Oryza sativa (... 38.1 0.015 gi|40538919|gb|AAR87176.1| expressed protein, 3'-partial [Ory... 32.7 0.65 gi|18643341|gb|AAL76272.1|AF467784_1 transcription factor EIL1 [ 32.3 0.85 gi|121309574|dbj|BAF44110.1| ethylene signal transcription facto 32.0 1.1 gi|3414837|gb|AAC31465.1| globulin-1 [Zea mays subsp. parviglumi 31.2 1.9 gi|14335170|gb|AAK59865.1| AT5g51070/K3K7_27 [Arabidopsis thalia 30.8 2.5 gi|18423233|ref|NP_568750.1| ERD1 (EARLY RESPONSIVE TO DEHYDR... 30.8 2.5 gi|15232362|ref|NP_188713.1| EIN3 (ETHYLENE-INSENSITIVE3); tr... 30.8 2.5 gi|38424035|dbj|BAD01726.1| hypothetical protein [Oryza sativa ( 30.0 4.2 gi|30016898|gb|AAP03999.1| EIL3 [Nicotiana tabacum] 29.6 5.5 gi|14280042|gb|AAK58858.1|AF328785_1 EIL2 [Lycopersicon esculent 29.6 5.5 gi|15229393|ref|NP_191882.1| unknown protein [Arabidopsis tha... 29.3 7.2 gi|110289317|gb|AAP54402.2| chloroplast inner envelope protei... 28.9 9.4 gi|55975504|gb|AAV68142.1| ethylene insensitive 3-like 4 [Dianth 28.9 9.4 gi|30683966|ref|NP_188243.2| unknown protein [Arabidopsis tha... 28.9 9.4 gi|10140720|gb|AAG13554.1|AC023240_27 putative chloroplast in... 28.9 9.4 gi|9279705|dbj|BAB01262.1| unnamed protein product [Arabidopsis 28.9 9.4
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 234 Number of extensions: 3 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 488 Length of database: 101054579 Length adjustment: 104 Effective length of query: 384 Effective length of database: 71586283 Effective search space: 4152004414 Effective search space used: 4152004414 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)