Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168942771-30533-57667988721.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig237 Length=534
Score E Sequences producing significant alignments: (Bits) Value gi|121281798|gb|ABM53472.1| eIF5A [Rosa chinensis] 238 4e-68 gi|33325117|gb|AAQ08191.1| eukaryotic translation initiation ... 238 4e-67 gi|33325123|gb|AAQ08194.1| eukaryotic translation initiation ... 236 1e-66 gi|33325121|gb|AAQ08193.1| eukaryotic translation initiation ... 236 2e-66 gi|33325127|gb|AAQ08196.1| eukaryotic translation initiation ... 236 2e-66 gi|33325129|gb|AAQ08197.1| eukaryotic translation initiation ... 234 4e-66 gi|33325131|gb|AAQ08198.1| eukaryotic translation initiation ... 232 8e-66 gi|115488712|ref|NP_001066843.1| Os12g0507200 [Oryza sativa (... 231 1e-65 gi|78100187|sp|P69039|IF5A1_NICPL Eukaryotic translation init... 234 2e-65 gi|124226|sp|P24922|IF5A2_NICPL Eukaryotic translation initia... 229 3e-65 gi|20138704|sp|Q9AXJ4|IF5A_MANES Eukaryotic translation initi... 231 4e-65 gi|3024022|sp|P56337|IF5A5_SOLTU Eukaryotic translation initi... 232 6e-65 gi|20138708|sp|Q9AXQ6|IF5A1_LYCES Eukaryotic translation init... 232 8e-65 gi|13094963|gb|AAK12100.1|AF323604_1 initiation factor eIF5-A [M 229 2e-64 gi|40287522|gb|AAR83875.1| mary storys protein [Capsicum annu... 232 4e-64 gi|124230|sp|P26564|IF5A1_MEDSA Eukaryotic translation initia... 227 4e-64 gi|20138707|sp|Q9AXQ5|IF5A2_LYCES Eukaryotic translation init... 228 7e-64 gi|3024021|sp|P56336|IF5A4_SOLTU Eukaryotic translation initi... 228 7e-64 gi|85376261|gb|ABC70326.1| eukaryotic translation initiation fac 228 7e-64 gi|3024020|sp|P56335|IF5A3_SOLTU Eukaryotic translation initi... 230 9e-64 gi|20138706|sp|Q9AXQ4|IF5A3_LYCES Eukaryotic translation init... 229 9e-64 gi|76573293|gb|ABA46751.1| eukaryotic initiation factor 5A4-l... 226 2e-63 gi|46577792|gb|AAT01416.1| translation initiation factor 5A [Tam 228 3e-63 gi|20138664|sp|Q945F4|IF5A2_MEDSA Eukaryotic translation init... 225 3e-63 gi|20138786|sp|Q9SC12|IF5A_SENVE Eukaryotic translation initi... 224 7e-63 gi|33325125|gb|AAQ08195.1| eukaryotic translation initiation ... 234 1e-62 gi|115473151|ref|NP_001060174.1| Os07g0597000 [Oryza sativa (... 226 3e-62 gi|115455471|ref|NP_001051336.1| Os03g0758800 [Oryza sativa (... 223 1e-61 gi|6752917|gb|AAF27938.1|AF225297_1 translation initiation facto 223 1e-61 gi|20138705|sp|Q9AXQ3|IF5A4_LYCES Eukaryotic translation init... 234 1e-61 gi|8919176|emb|CAB96075.1| translation initiation factor, eIF... 221 5e-61 gi|15223002|ref|NP_172848.1| EIF-5A; translation initiation f... 224 5e-61 gi|89276313|gb|ABD66513.1| eukaryotic translation initiation ... 232 5e-61 gi|115470295|ref|NP_001058746.1| Os07g0112800 [Oryza sativa (... 228 7e-61 gi|62642107|gb|AAX92692.1| eukaryotic translation initiation fac 220 2e-60 gi|3024019|sp|P56333|IF5A1_SOLTU Eukaryotic translation initi... 231 2e-60 gi|53748427|emb|CAH59406.1| eukaryotic translation initiation fa 219 2e-60 gi|12643437|sp|P80639|IF5A_MAIZE Eukaryotic translation initi... 222 4e-60 gi|42565381|gb|AAS20967.1| eukaryotic translation initiation ... 215 4e-60 gi|62642104|gb|AAX92691.1| eukaryotic translation initiation fac 217 1e-59 gi|108711192|gb|ABF98987.1| Eukaryotic translation initiation... 216 2e-59 gi|62642102|gb|AAX92690.1| eukaryotic translation initiation fac 214 4e-59 gi|62642111|gb|AAX92694.1| eukaryotic translation initiation fac 218 6e-59 gi|108711191|gb|ABF98986.1| Eukaryotic translation initiation... 213 2e-58 gi|13937159|gb|AAK50073.1|AF372933_1 At1g69410/F10D13.8 [Arab... 214 2e-58 gi|15222317|ref|NP_177100.1| translation initiation factor [A... 214 2e-58 gi|62642109|gb|AAX92693.1| eukaryotic translation initiation fac 209 3e-57 gi|20138709|sp|Q9AXQ7|IF5A_DIACA Eukaryotic translation initi... 217 3e-57 gi|100277|pir||S21058 translation initiation factor eIF-5A.1 ... 205 7e-57 gi|40805177|gb|AAR91929.1| eukaryotic translation initiation fac 212 1e-56 gi|8778393|gb|AAF79401.1|AC068197_11 F16A14.17 [Arabidopsis thal 207 6e-56 gi|9295717|gb|AAF87023.1|AC006535_1 T24P13.1 [Arabidopsis thalia 208 1e-55 gi|15222741|ref|NP_173985.1| translation initiation factor [A... 208 1e-55 gi|78191545|gb|ABB29985.1| translation initiation factor 5A [Thi 205 3e-55 gi|74048999|gb|AAZ95171.1| eukaryotic translation initiation ... 209 4e-54 gi|78191549|gb|ABB29987.1| translation initiation factor 5A [Sec 208 8e-54 gi|74049022|gb|AAZ95172.1| eukaryotic translation initiation ... 207 2e-53 gi|74049040|gb|AAZ95173.1| eukaryotic translation initiation ... 206 3e-53 gi|108711193|gb|ABF98988.1| Eukaryotic translation initiation... 201 1e-51 gi|82754834|gb|ABB90163.1| translation initiation factor [Critho 152 2e-39 gi|82754832|gb|ABB90162.1| translation initiation factor [Psathy 150 7e-39 gi|82754822|gb|ABB90157.1| translation initiation factor [Pseudo 148 3e-38 gi|82754824|gb|ABB90158.1| translation initiation factor [Lop... 153 4e-37 gi|82754826|gb|ABB90159.1| translation initiation factor [Ere... 152 7e-37 gi|82754830|gb|ABB90161.1| translation initiation factor [Secale 150 3e-36 gi|92878534|gb|ABE85123.1| KOW [Medicago truncatula] 149 8e-36 gi|33325133|gb|AAQ08199.1| eukaryotic translation initiation ... 92.4 5e-24 gi|24059989|dbj|BAC21451.1| hypothetical protein [Oryza sativa ( 66.6 9e-14 gi|92879237|gb|ABE85422.1| Translation protein SH3-like [Medi... 55.8 9e-08 gi|116000546|emb|CAL50226.1| ABL161Cp (ISS) [Ostreococcus tauri] 45.4 1e-04 gi|115442517|ref|NP_001045538.1| Os01g0971900 [Oryza sativa (... 30.8 3.0 gi|38605792|emb|CAD39988.3| OSJNBb0045P24.6 [Oryza sativa (japon 30.8 3.0 gi|28876012|gb|AAO60021.1| putative polyprotein [Oryza sativa... 30.4 4.0 gi|77553623|gb|ABA96419.1| retrotransposon protein, putative,... 30.4 4.0 gi|115476512|ref|NP_001061852.1| Os08g0430000 [Oryza sativa (... 30.0 5.2 gi|115446949|ref|NP_001047254.1| Os02g0582600 [Oryza sativa (... 30.0 5.2 gi|37572941|dbj|BAC98571.1| unknown protein [Oryza sativa (ja... 30.0 5.2 gi|10176995|dbj|BAB10245.1| unnamed protein product [Arabidopsis 29.6 6.8 gi|108706445|gb|ABF94240.1| hypothetical protein LOC_Os03g077... 29.6 6.8 gi|15242353|ref|NP_199337.1| ATP binding / transmembrane recepto 29.6 6.8 gi|115478597|ref|NP_001062892.1| Os09g0327800 [Oryza sativa (... 29.3 8.8 gi|108706864|gb|ABF94659.1| hypothetical protein LOC_Os03g118... 29.3 8.8 gi|48716911|dbj|BAD23606.1| hypothetical protein [Oryza sativa ( 29.3 8.8
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 362 Number of extensions: 5 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 534 Length of database: 101054579 Length adjustment: 106 Effective length of query: 428 Effective length of database: 71019585 Effective search space: 5113410120 Effective search space used: 5113410120 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)