Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168942943-11778-105404042708.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig245 Length=704
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|3158476|gb|AAC17529.1| aquaporin 2 [Samanea saman] 302 9e-82 gi|55982653|gb|AAV69744.1| aquaporin [Vitis vinifera] 297 3e-80 gi|111379078|gb|ABH09326.1| putative aquaporin [Vitis vinifera] 295 1e-79 gi|60498691|dbj|BAD90700.1| plasma membrane intrinsic protein 2; 295 1e-79 gi|60498689|dbj|BAD90699.1| plasma membrane intrinsic protein 2; 295 1e-79 gi|8071620|gb|AAF71816.1|AF141642_1 putative aquaporin PIP2-1 [V 291 2e-78 gi|82659447|gb|ABB88840.1| aquaporin [Stevia rebaudiana] 291 2e-78 gi|57336896|emb|CAH60723.1| putative plasma membrane intrinsi... 290 4e-78 gi|87240949|gb|ABD32807.1| Major intrinsic protein [Medicago tru 290 4e-78 gi|85376638|gb|ABC70536.1| aquaporin protein [Vitis pseudoreticu 290 5e-78 gi|21554356|gb|AAM63463.1| aquaporin (plasma membrane intrins... 289 8e-78 gi|15228095|ref|NP_181254.1| PIP2B; water channel [Arabidopsi... 289 8e-78 gi|13486942|dbj|BAB40143.1| plasma membrane intrinsic protein 2- 288 1e-77 gi|15224999|ref|NP_181434.1| PIP2;6/PIP2E; water channel [Ara... 288 1e-77 gi|15231810|ref|NP_190910.1| PIP2A; water channel [Arabidopsi... 288 2e-77 gi|85822145|gb|ABC84558.1| aquaporin PIP2 [Vitis vinifera] 287 2e-77 gi|118132688|gb|ABK60195.1| PIP2 protein [Gossypium hirsutum] 287 3e-77 gi|886100|gb|AAA69490.1| putative water channel protein; plas... 287 3e-77 gi|7209560|dbj|BAA92260.1| Plasma membrane aquaporin 2b [Raphanu 287 3e-77 gi|5081421|gb|AAD39373.1|AF118382_1 plasma membrane intrinsic pr 286 4e-77 gi|85036237|gb|ABC69040.1| aquaporin PIP2-1 [Rhododendron catawb 286 5e-77 gi|28395420|gb|AAO39008.1| plasma intrinsic protein 2,2 [Juglans 286 7e-77 gi|5081423|gb|AAD39374.1|AF118383_1 plasma membrane intrinsic pr 286 7e-77 gi|3551133|dbj|BAA32778.1| Plasma membrane aquaporin (PAQ2) [Rap 286 7e-77 gi|7209562|dbj|BAA92261.1| Plasma membrane aquaporin 2c [Raphanu 286 7e-77 gi|119720830|gb|ABL97985.1| water channel protein [Brassica rapa 285 9e-77 gi|58700408|gb|AAW80918.1| putative plasma membrane intrinsic... 285 1e-76 gi|1657948|gb|AAB18227.1| MipC [Mesembryanthemum crystallinum] 285 1e-76 gi|13447801|gb|AAK26758.1| plasma membrane integral protein ZmPI 285 1e-76 gi|15233102|ref|NP_191042.1| PIP2;5/PIP2D; water channel [Ara... 284 2e-76 gi|15239397|ref|NP_200874.1| PIP2;4/PIP2F; water channel [Ara... 284 3e-76 gi|57336898|emb|CAH60724.1| putative plasma membrane intrinsi... 283 3e-76 gi|29650727|gb|AAO86707.1| aquaporin [Zea mays] 283 3e-76 gi|17940746|gb|AAL49752.1|AF452014_1 aquaporin-like protein [Pet 283 3e-76 gi|28395418|gb|AAO39007.1| plasma intrinsic protein 2,1 [Juglans 283 4e-76 gi|13447803|gb|AAK26759.1| plasma membrane integral protein ZmPI 283 4e-76 gi|115471893|ref|NP_001059545.1| Os07g0448800 [Oryza sativa (... 283 4e-76 gi|104391599|gb|ABB13430.2| plasma membrane intrinsic protein [O 283 6e-76 gi|472879|emb|CAA53478.1| plasma membrane intrinsic protein 2b [ 282 8e-76 gi|4884864|gb|AAD31846.1|AF133530_1 water channel protein MipH [ 282 8e-76 gi|1402833|gb|AAB67868.1| plasma membrane major intrinsic protei 281 1e-75 gi|12006845|gb|AAG44947.1|AF290620_1 putative PIP2 [Nicotiana gl 281 2e-75 gi|82568687|dbj|BAE48656.1| aquaporin [Prunus mume] 280 3e-75 gi|13486938|dbj|BAB40141.1| plasma membrane intrinsic protein 2- 280 3e-75 gi|57638508|gb|AAW55294.1| aquaporin 2 [Aegiceras corniculatum] 280 4e-75 gi|21537097|gb|AAM61438.1| aquaporin (plasma membrane intrins... 280 5e-75 gi|15228096|ref|NP_181255.1| RD28; water channel [Arabidopsis... 280 5e-75 gi|114841481|dbj|BAF32042.1| putative aquaporin [Cryptomeria ... 279 6e-75 gi|3135543|gb|AAC16545.1| aquaporin [Oryza sativa] 279 8e-75 gi|15227302|ref|NP_179277.1| PIP2;8/PIP3B; water channel [Ara... 278 1e-74 gi|7649310|gb|AAF65845.1|AF255795_1 aquaporin 1 [Allium cepa] 278 1e-74 gi|114841679|dbj|BAF32141.1| putative aquaporin [Taxodium distic 278 2e-74 gi|56131022|gb|AAV80229.1| aquaporin 2 [Aegiceras corniculatum] 278 2e-74 gi|17940742|gb|AAL49750.1|AF452012_1 aquaporin-like protein [Pet 278 2e-74 gi|13447811|gb|AAK26763.1| plasma membrane integral protein ZmPI 278 2e-74 gi|60498687|dbj|BAD90698.1| plasma membrane intrinsic protein 2; 277 2e-74 gi|2982239|gb|AAC32107.1| probable aquaporin [Picea mariana] 277 3e-74 gi|57336892|emb|CAH60721.1| putative plasma membrane intrinsi... 276 4e-74 gi|62546339|gb|AAX86046.1| PIP2,2 [Glycine max] 276 5e-74 gi|118132690|gb|ABK60196.1| PIP2 protein [Gossypium hirsutum] 275 9e-74 gi|111379080|gb|ABH09327.1| putative aquaporin [Vitis vinifera] 275 9e-74 gi|57336890|emb|CAH60720.1| putative plasma membrane intrinsi... 275 9e-74 gi|8071628|gb|AAF71820.1|AF141900_1 putative aquaporin PIP2-2 [V 275 9e-74 gi|38198154|emb|CAE53883.1| aquaporin [Ricinus communis] 275 9e-74 gi|111379082|gb|ABH09328.1| putative aquaporin [Vitis vinifera] 275 1e-73 gi|1657950|gb|AAB18228.1| MipE [Mesembryanthemum crystallinum] 275 1e-73 gi|45476710|gb|AAS65964.1| aquaporin PIP 2 [Physcomitrella paten 275 2e-73 gi|17025878|gb|AAL32127.1| aquaporin [Medicago truncatula] 274 2e-73 gi|2440046|emb|CAA04654.1| major intrinsic protein PIPC [Cratero 274 2e-73 gi|62945921|gb|AAY22203.1| putative aquaporin [Phaseolus vulgari 274 2e-73 gi|868156|gb|AAA68701.1| similar to mipB gene product in Mese... 274 3e-73 gi|62642092|gb|AAX92685.1| probable aquaporin [Picea abies] 274 3e-73 gi|60498685|dbj|BAD90697.1| plasma membrane intrinsic protein 2; 273 3e-73 gi|1688296|gb|AAB36949.1| plasma membrane intrinsic protein PIP3 273 3e-73 gi|2306917|gb|AAB65787.1| plasma membrane intrinsic protein [Ara 273 3e-73 gi|15236267|ref|NP_195236.1| PIP3 (PLASMA MEMBRANE INTRINSIC ... 273 3e-73 gi|115447423|ref|NP_001047491.1| Os02g0629200 [Oryza sativa (... 273 5e-73 gi|67937804|gb|AAY83358.1| plasma membrane aquaporin [Physcomitr 272 8e-73 gi|11119335|gb|AAG30607.1|AF314656_1 aquaporin [Brassica olerace 272 8e-73 gi|2373403|dbj|BAA22098.1| unnamed protein product [Arabidopsis 272 8e-73 gi|45643635|gb|AAS72893.1| plasma membrane aquaporin [Physcomitr 272 1e-72 gi|45643633|gb|AAS72892.1| plasma membrane aquaporin [Physcomitr 271 1e-72 gi|5327263|emb|CAB46351.1| major intrinsic protein 2 [Solanum tu 271 1e-72 gi|78191436|gb|ABB29939.1| major intrinsic protein 2-like [Solan 271 1e-72 gi|115334277|dbj|BAF33069.1| aquaporin [Hordeum vulgare] 271 2e-72 gi|60498693|dbj|BAD90701.1| plasma membrane intrinsic protein 2; 271 2e-72 gi|115459470|ref|NP_001053335.1| Os04g0521100 [Oryza sativa (... 271 2e-72 gi|9931530|gb|AAG02208.1|AF290201_1 plasma membrane intrinsic pr 270 4e-72 gi|18076470|emb|CAC82712.1| major intrinsic protein 1 [Populu... 270 4e-72 gi|4741931|gb|AAD28761.1| plasma membrane intrinsic protein [... 270 4e-72 gi|17940744|gb|AAL49751.1|AF452013_1 aquaporin-like protein [Pet 270 5e-72 gi|13447807|gb|AAK26761.1| plasma membrane integral protein ZmPI 270 5e-72 gi|13447805|gb|AAK26760.1| plasma membrane integral protein ZmPI 270 5e-72 gi|68533200|dbj|BAE06148.1| PIP aquaporin isoform [Hordeum vulga 270 5e-72 gi|85544225|pdb|2B5F|A Chain A, Crystal Structure Of The Spin... 269 9e-72 gi|68299599|dbj|BAE02729.1| PIP aquaporin [Hordeum vulgare] 269 9e-72 gi|85544014|pdb|1Z98|A Chain A, Crystal Structure Of The Spin... 269 9e-72 gi|2662310|dbj|BAA23744.1| HvPIP2;1 [Hordeum vulgare subsp. vulg 269 9e-72 gi|5381216|dbj|BAA82258.1| water channel protein [Oryza sativa ( 268 1e-71 gi|83283953|gb|ABC01884.1| plasma membrane intrinsic protein ... 268 2e-71
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 438 Number of extensions: 6 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 704 Length of database: 101054579 Length adjustment: 110 Effective length of query: 594 Effective length of database: 69886189 Effective search space: 8665887436 Effective search space used: 8665887436 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 66 (30.0 bits)