Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168943000-16720-200382749005.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig246 Length=569
Score E Sequences producing significant alignments: (Bits) Value gi|47026845|gb|AAT08648.1| ADP-ribosylation factor [Hyacinthus o 284 2e-76 gi|38353642|gb|AAR18698.1| ADP-ribosylation factor 1 [Populus to 283 2e-76 gi|77812440|gb|ABB03801.1| ADP ribosylation factor 002 [Daucu... 283 2e-76 gi|11131026|sp|O48920|ARF_VIGUN ADP-ribosylation factor >gi|2... 283 2e-76 gi|108711707|gb|ABF99502.1| ADP-ribosylation factor, putative... 282 5e-76 gi|39653273|gb|AAR29293.1| ADP-ribosylation factor [Medicago ... 282 5e-76 gi|115456151|ref|NP_001051676.1| Os03g0811900 [Oryza sativa (... 282 5e-76 gi|15241463|ref|NP_196971.1| ATARFA1B; GTP binding [Arabidops... 282 5e-76 gi|76160966|gb|ABA40446.1| unknown [Solanum tuberosum] 282 5e-76 gi|1351974|sp|P49076|ARF_MAIZE ADP-ribosylation factor >gi|55... 282 5e-76 gi|77999251|gb|ABB16972.1| ADP-ribosylation factor 1-like pro... 282 7e-76 gi|30681825|ref|NP_172533.2| GTP binding [Arabidopsis thalian... 281 9e-76 gi|8778579|gb|AAF79587.1|AC007945_7 F28C11.12 [Arabidopsis thali 281 9e-76 gi|6573751|gb|AAF17671.1|AC009398_20 F20B24.7 [Arabidopsis thali 281 9e-76 gi|15223164|ref|NP_177206.1| unknown protein [Arabidopsis tha... 281 9e-76 gi|25294174|pir||E86368 F5O8.5 protein - Arabidopsis thaliana... 281 9e-76 gi|17154685|emb|CAD12855.1| ADP-ribosylation factor [Gossypiu... 281 9e-76 gi|115435820|ref|NP_001042668.1| Os01g0265100 [Oryza sativa (... 281 1e-75 gi|1703375|sp|P51822|ARF1_DAUCA ADP-ribosylation factor 1 >gi... 281 1e-75 gi|20161472|dbj|BAB90396.1| ADP-ribosylation factor [Oryza sa... 281 1e-75 gi|52548250|gb|AAU82112.1| ADP-ribosylation factor [Triticum aes 281 1e-75 gi|7643794|gb|AAF65512.1| ADP-ribosylation factor [Capsicum a... 281 1e-75 gi|76160984|gb|ABA40455.1| ARF-like small GTPase-like protein... 281 1e-75 gi|115440639|ref|NP_001044599.1| Os01g0813400 [Oryza sativa (... 281 1e-75 gi|115464585|ref|NP_001055892.1| Os05g0489600 [Oryza sativa (... 281 1e-75 gi|15226521|ref|NP_182239.1| ARF1 (ADP-RIBOSYLATION FACTOR 1)... 281 1e-75 gi|89475524|gb|ABD73294.1| ADP-ribosylation factor-like protein 280 3e-75 gi|15228723|ref|NP_191788.1| GTP binding [Arabidopsis thalian... 280 3e-75 gi|115471217|ref|NP_001059207.1| Os07g0223400 [Oryza sativa (... 280 3e-75 gi|115501471|dbj|BAF34209.1| ADP ribosylation factor [Nicotiana 279 4e-75 gi|47026876|gb|AAT08663.1| ADP-ribosylation factor [Hyacinthus o 279 6e-75 gi|29028256|gb|AAO62347.1| ARF1-like GTP-binding protein [Gossyp 279 6e-75 gi|4324967|gb|AAD17207.1| ADP-ribosylation factor [Glycine max] 278 1e-74 gi|37932258|gb|AAP69821.1| ARF [Oryza sativa (japonica cultivar- 276 5e-74 gi|11131023|sp|O48649|ARF1_SALBA ADP-ribosylation factor 1 >g... 276 5e-74 gi|3182919|sp|O23778|ARF1_CATRO ADP-ribosylation factor 1 >gi... 275 1e-73 gi|1703374|sp|P51821|ARF1_CHLRE ADP-ribosylation factor 1 >gi... 274 1e-73 gi|116060895|emb|CAL57373.1| unnamed protein product [Ostreococc 273 4e-73 gi|29124979|gb|AAO63779.1| ADP-ribosylation factor 1 [Populus tr 273 4e-73 gi|1703376|sp|P51824|ARF1_SOLTU ADP-ribosylation factor 1 >gi... 267 2e-71 gi|82621154|gb|ABB86265.1| ADP-ribosylation factor-like [Solanum 253 4e-67 gi|92885316|gb|ABE87751.1| Ras GTPase; ARF/SAR superfamily [Medi 251 1e-66 gi|82621126|gb|ABB86251.1| ADP-ribosylation factor 1-like [Solan 247 2e-65 gi|47026953|gb|AAT08696.1| ADP-ribosylation factor [Hyacinthus o 211 1e-54 gi|15226086|ref|NP_179133.1| ATARFB1A; GTP binding [Arabidops... 207 2e-53 gi|92875403|gb|ABE83396.1| Guanine nucleotide binding protein... 196 5e-50 gi|115475543|ref|NP_001061368.1| Os08g0248900 [Oryza sativa (... 195 1e-49 gi|30682545|ref|NP_850057.1| GTP binding / guanyl nucleotide ... 192 5e-49 gi|92890621|gb|ABE90431.1| Ras GTPase [Medicago truncatula] 192 7e-49 gi|115483682|ref|NP_001065511.1| Os10g0580200 [Oryza sativa (... 192 9e-49 gi|3182922|sp|Q96361|ARF1_BRARP ADP-ribosylation factor 1 >gi... 191 2e-48 gi|41052966|dbj|BAD07876.1| putative ADP-ribosylation factor ... 191 2e-48 gi|15237901|ref|NP_197208.1| GTP binding [Arabidopsis thalian... 190 3e-48 gi|15228464|ref|NP_186962.1| ATARFB1C; GTP binding [Arabidops... 189 4e-48 gi|92893756|gb|ABE91892.1| Ras GTPase [Medicago truncatula] 188 1e-47 gi|58220034|gb|AAW67545.1| ADP-ribosylation factor [Daucus carot 187 2e-47 gi|78709066|gb|ABB48041.1| ADP-ribosylation factor, putative,... 184 2e-46 gi|116055791|emb|CAL57876.1| GTP-binding ADP-ribosylation fac... 183 3e-46 gi|115443985|ref|NP_001045772.1| Os02g0128600 [Oryza sativa (... 179 6e-45 gi|7248402|dbj|BAA92725.1| putative ADP-ribosylation factor [... 178 1e-44 gi|1184987|gb|AAA87885.1| NTGB1 [Nicotiana tabacum] 177 2e-44 gi|89257442|gb|ABD64934.1| ADP-ribosylation factor, putative [Br 174 3e-43 gi|92890620|gb|ABE90430.1| Ras GTPase [Medicago truncatula] 170 4e-42 gi|84796043|gb|ABC66109.1| putative ADP ribosylation factor 1 [Z 168 1e-41 gi|15228912|ref|NP_188935.1| ATARFC1; GTP binding [Arabidopsi... 163 4e-40 gi|110289664|gb|AAP55187.2| ADP-ribosylation factor, putative... 161 1e-39 gi|115486053|ref|NP_001068170.1| Os11g0586900 [Oryza sativa (... 157 2e-38 gi|32401906|gb|AAP80941.1| ADP-ribosylation factor [Gossypium ba 156 4e-38 gi|108711708|gb|ABF99503.1| ADP-ribosylation factor, putative... 140 4e-36 gi|115448099|ref|NP_001047829.1| Os02g0699300 [Oryza sativa (... 143 4e-34 gi|115445861|ref|NP_001046710.1| Os02g0327100 [Oryza sativa (... 139 7e-33 gi|15224165|ref|NP_179430.1| TTN5 (TITAN 5); GTP binding [Ara... 127 2e-29 gi|9857537|gb|AAG00892.1|AC064879_10 Similar to ADP-ribosylation 127 3e-29 gi|18378965|ref|NP_563652.1| ATARFD1A; GTP binding [Arabidopsis 122 1e-27 gi|116057640|emb|CAL53843.1| GTP-binding ADP-ribosylation fac... 120 4e-27 gi|15242939|ref|NP_200034.1| ATGB1 [Arabidopsis thaliana] >gi... 108 1e-23 gi|92890618|gb|ABE90428.1| ARF/SAR superfamily [Medicago truncat 106 5e-23 gi|21553780|gb|AAM62873.1| GTP-binding protein-like [Arabidopsis 106 5e-23 gi|115453365|ref|NP_001050283.1| Os03g0392300 [Oryza sativa (... 104 2e-22 gi|115448495|ref|NP_001048027.1| Os02g0732500 [Oryza sativa (... 104 2e-22 gi|18421676|ref|NP_568553.1| ATARLA1A; GTP binding [Arabidops... 103 5e-22 gi|22331720|ref|NP_190556.2| ATARLA1C; GTP binding [Arabidops... 100 3e-21 gi|115451383|ref|NP_001049292.1| Os03g0200800 [Oryza sativa (... 99.8 6e-21 gi|115473403|ref|NP_001060300.1| Os07g0620400 [Oryza sativa (... 99.0 1e-20 gi|18425204|ref|NP_569051.1| ATARLA1D; GTP binding [Arabidops... 98.6 1e-20 gi|28466895|gb|AAO44056.1| At1g02430 [Arabidopsis thaliana] 97.4 3e-20 gi|42561632|ref|NP_171745.2| ATARFD1B; GTP binding [Arabidopsis 97.4 3e-20 gi|9757978|dbj|BAB08314.1| ADP-ribosylation factor-like protein 95.5 1e-19 gi|20197875|gb|AAM15297.1| ADP-ribosylation factor 3 [Arabido... 94.7 2e-19 gi|2961178|gb|AAC05675.1| GTP-binding protein [Oryza sativa] 94.4 3e-19 gi|28630917|gb|AAO45615.1| ADP-ribosylation factor [Gossypium hi 94.0 3e-19 gi|78191446|gb|ABB29944.1| GTPase-like [Solanum tuberosum] 92.4 1e-18 gi|1710851|sp|P52884|SAR2_LYCES GTP-binding protein SAR2 >gi|473 92.4 1e-18 gi|15229626|ref|NP_190555.1| ATARLA1B; GTP binding [Arabidops... 91.3 2e-18 gi|9757877|dbj|BAB08464.1| ADP-ribosylation factor-like protein 91.3 2e-18 gi|77999253|gb|ABB16973.1| GTPase-like protein [Solanum tuberosu 90.9 3e-18 gi|3450893|gb|AAC32610.1| ras-like small monomeric GTP-binding p 88.2 2e-17 gi|15217457|ref|NP_172390.1| ATSAR1/ATSARA1A; GTP binding [Ar... 87.4 3e-17 gi|115436368|ref|NP_001042942.1| Os01g0338000 [Oryza sativa (... 87.0 4e-17 gi|76573331|gb|ABA46770.1| small GTP-binding protein Sar1BNt-... 86.3 7e-17
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 419 Number of extensions: 0 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 569 Length of database: 101054579 Length adjustment: 107 Effective length of query: 462 Effective length of database: 70736236 Effective search space: 5800371352 Effective search space used: 5800371352 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)