RID=1168943385-7380-193977362792.BLASTQ4, Contig253

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168943385-7380-193977362792.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig253
Length=377

Distribution of 15 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|99646724|emb|CAK22419.1|  B12D-like protein [Beta vulgaris]      104    8e-23
gi|4530585|gb|AAD22104.1|  B12D protein [Ipomoea batatas]          91.7    7e-19
gi|15228342|ref|NP_190397.1|  unknown protein [Arabidopsis tha...  88.6    6e-18 
gi|115467362|ref|NP_001057280.1|  Os06g0246000 [Oryza sativa (...  80.9    1e-15 
gi|16506646|gb|AAL17696.1|  B12D-like protein [Castanea sativa]    78.6    6e-15
gi|115471523|ref|NP_001059360.1|  Os07g0274700 [Oryza sativa (...  77.4    1e-14 
gi|471319|emb|CAA54065.1|  HvB12D [Hordeum vulgare subsp. vulg...  77.4    1e-14 
gi|15230104|ref|NP_189632.1|  unknown protein [Arabidopsis tha...  71.2    1e-12 
gi|38194922|gb|AAR13310.1|  B12D-like protein [Phaseolus vulgaris  66.6    2e-11
gi|115473247|ref|NP_001060222.1|  Os07g0604600 [Oryza sativa (...  64.7    9e-11 
gi|108709698|gb|ABF97493.1|  expressed protein [Oryza sativa (jap  63.2    3e-10
gi|115454043|ref|NP_001050622.1|  Os03g0601500 [Oryza sativa (...  63.2    3e-10 
gi|115473249|ref|NP_001060223.1|  Os07g0604700 [Oryza sativa (...  62.0    6e-10 
gi|115471521|ref|NP_001059359.1|  Os07g0274400 [Oryza sativa (...  57.0    2e-08 
gi|115475652|ref|NP_001061422.1|  Os08g0271300 [Oryza sativa (...  28.1    9.5

Alignments

 

>gi|99646724|emb|CAK22419.1|  B12D-like protein [Beta vulgaris]
Length=91

 Score =  104 bits (260),  Expect = 8e-23
 Identities = 48/57 (84%), Positives = 53/57 (92%), Gaps = 0/57 (0%)
 Frame = +2

Query  2    ICINPEVRVNKENRAAGVLDNFAEGEKYAEHFVRKYVRNRAPEIMPSINSFFTDPKR  172
            ICINPEVRV+KENRAAGVL+NF+EGEKYAEHF+RKYVRN+ PEIMPSINSFF D  R
Sbjct  34   ICINPEVRVSKENRAAGVLENFSEGEKYAEHFLRKYVRNKTPEIMPSINSFFADSTR  90


>gi|4530585|gb|AAD22104.1|  B12D protein [Ipomoea batatas]
Length=90

 Score = 91.7 bits (226),  Expect = 7e-19
 Identities = 40/54 (74%), Positives = 50/54 (92%), Gaps = 0/54 (0%)
 Frame = +2

Query  11   NPEVRVNKENRAAGVLDNFAEGEKYAEHFVRKYVRNRAPEIMPSINSFFTDPKR  172
            NPEVRVNKE RAAGVL+N+ EG+KYAEH +RK+VRN++PEIMPS+N FF+DP+R
Sbjct  36   NPEVRVNKEGRAAGVLENYEEGKKYAEHSLRKFVRNKSPEIMPSLNRFFSDPQR  89


>gi|15228342|ref|NP_190397.1|  unknown protein [Arabidopsis thaliana]
 gi|7487384|pir||T13003  hypothetical protein T24C20.20 - Arabidopsis thaliana
 gi|5541720|emb|CAB51061.1|  B12D-like protein [Arabidopsis thaliana]
 gi|19698959|gb|AAL91215.1|  B12D-like protein [Arabidopsis thaliana]
 gi|24899711|gb|AAN65070.1|  B12D-like protein [Arabidopsis thaliana]
Length=88

 Score = 88.6 bits (218),  Expect = 6e-18
 Identities = 39/52 (75%), Positives = 45/52 (86%), Gaps = 0/52 (0%)
 Frame = +2

Query  11   NPEVRVNKENRAAGVLDNFAEGEKYAEHFVRKYVRNRAPEIMPSINSFFTDP  166
            NPEVR  KENRAAG+LDN AEGEKY E+F+RK+VRN+ PEIMP +N FFTDP
Sbjct  35   NPEVRCTKENRAAGILDNHAEGEKYKENFLRKFVRNKKPEIMPGLNKFFTDP  86


>gi|115467362|ref|NP_001057280.1|  Os06g0246000 [Oryza sativa (japonica cultivar-group)]
 gi|2293568|gb|AAB65433.1|  HvB12D homolog [Oryza sativa]
 gi|18644696|gb|AAL76334.1|  putative G-box binding protein [Oryza sativa]
 gi|52076746|dbj|BAD45657.1|  G-box binding protein-like [Oryza sativa (japonica cultivar-group)]
 gi|113595320|dbj|BAF19194.1|  Os06g0246000 [Oryza sativa (japonica cultivar-group)]
Length=89

 Score = 80.9 bits (198),  Expect = 1e-15
 Identities = 36/54 (66%), Positives = 44/54 (81%), Gaps = 0/54 (0%)
 Frame = +2

Query  11   NPEVRVNKENRAAGVLDNFAEGEKYAEHFVRKYVRNRAPEIMPSINSFFTDPKR  172
            NPEVRVNK  RAAGVL+N  EG +YAEH +R YVR++ PEIMP+IN FFT+P +
Sbjct  36   NPEVRVNKVGRAAGVLENHEEGRRYAEHGLRNYVRDKTPEIMPAINKFFTEPTK  89


>gi|16506646|gb|AAL17696.1|  B12D-like protein [Castanea sativa]
Length=134

 Score = 78.6 bits (192),  Expect = 6e-15
 Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 9/81 (11%)
 Frame = +2

Query  2    ICINPEVRVNKENRAAG-VLDNFAEGEKYAEHFVRKYVRNRAPEIMPSINSFFTDPKRGL  178
            IC NPEVRV KEN +    L NF EGEKY++H VRK+V NR+P IMPS+ SFF++PK   
Sbjct  59   ICTNPEVRVTKENNSCRKCLHNFEEGEKYSQHAVRKFVLNRSPHIMPSLKSFFSEPK---  115

Query  179  ALLLLYVEMEMKIQKTKSCSI  241
                 Y +++  +   + C I
Sbjct  116  -----YFKLQSNVVNLQDCQI  131


>gi|115471523|ref|NP_001059360.1|  Os07g0274700 [Oryza sativa (japonica cultivar-group)]
 gi|34395050|dbj|BAC84633.1|  putative B12D protein [Oryza sativa (japonica cultivar-group)]
 gi|50508850|dbj|BAD31625.1|  putative B12D protein [Oryza sativa (japonica cultivar-group)]
 gi|113610896|dbj|BAF21274.1|  Os07g0274700 [Oryza sativa (japonica cultivar-group)]
Length=98

 Score = 77.4 bits (189),  Expect = 1e-14
 Identities = 34/54 (62%), Positives = 44/54 (81%), Gaps = 0/54 (0%)
 Frame = +2

Query  11   NPEVRVNKENRAAGVLDNFAEGEKYAEHFVRKYVRNRAPEIMPSINSFFTDPKR  172
            NPEVRV KE RAAGVL+NF EG++Y++H  RK++  + PEIMP INSFF+DP +
Sbjct  44   NPEVRVLKEKRAAGVLENFDEGKRYSQHGFRKFIDGKRPEIMPGINSFFSDPPK  97


>gi|471319|emb|CAA54065.1|  HvB12D [Hordeum vulgare subsp. vulgare]
 gi|3445292|emb|CAA70936.1|  B12Dg1 [Hordeum vulgare subsp. vulgare]
Length=87

 Score = 77.4 bits (189),  Expect = 1e-14
 Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 0/53 (0%)
 Frame = +2

Query  11   NPEVRVNKENRAAGVLDNFAEGEKYAEHFVRKYVRNRAPEIMPSINSFFTDPK  169
            NPEVRV+K  RAAGVL+N  EG +YAEH +R YV+++ PEIMP IN FFT PK
Sbjct  35   NPEVRVSKMGRAAGVLENHEEGRRYAEHGLRAYVQDKTPEIMPGINKFFTSPK  87


>gi|15230104|ref|NP_189632.1|  unknown protein [Arabidopsis thaliana]
 gi|13477085|dbj|BAB02998.1|  unnamed protein product [Arabidopsis thaliana]
Length=87

 Score = 71.2 bits (173),  Expect = 1e-12
 Identities = 29/51 (56%), Positives = 41/51 (80%), Gaps = 0/51 (0%)
 Frame = +2

Query  8    INPEVRVNKENRAAGVLDNFAEGEKYAEHFVRKYVRNRAPEIMPSINSFFT  160
            +NP+ R+NKE+R  G+L+N  EGEKYA+H  RKY+R R P++MPS+N FF+
Sbjct  33   LNPDCRINKEHRKMGILENKDEGEKYAQHNFRKYLRTRQPQVMPSLNRFFS  83


>gi|38194922|gb|AAR13310.1|  B12D-like protein [Phaseolus vulgaris]
Length=128

 Score = 66.6 bits (161),  Expect = 2e-11
 Identities = 31/49 (63%), Positives = 37/49 (75%), Gaps = 0/49 (0%)
 Frame = +2

Query  23   RVNKENRAAGVLDNFAEGEKYAEHFVRKYVRNRAPEIMPSINSFFTDPK  169
            RVNK  R+  VLDN  EGEKYAEH +RK++R R PEIMP+IN FF+  K
Sbjct  80   RVNKTRRSMAVLDNREEGEKYAEHGLRKFLRTRPPEIMPTINHFFSQDK  128


>gi|115473247|ref|NP_001060222.1|  Os07g0604600 [Oryza sativa (japonica cultivar-group)]
 gi|34394572|dbj|BAC83875.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113611758|dbj|BAF22136.1|  Os07g0604600 [Oryza sativa (japonica cultivar-group)]
Length=95

 Score = 64.7 bits (156),  Expect = 9e-11
 Identities = 26/55 (47%), Positives = 39/55 (70%), Gaps = 0/55 (0%)
 Frame = +2

Query  2    ICINPEVRVNKENRAAGVLDNFAEGEKYAEHFVRKYVRNRAPEIMPSINSFFTDP  166
            + +NP+VRVNK NR + VL+N  EGEKY +H  R+++  + PE+ P++N FF  P
Sbjct  31   VFMNPDVRVNKNNRKSAVLENAEEGEKYHQHAFRRFLATQRPEVFPALNRFFAGP  85


>gi|108709698|gb|ABF97493.1|  expressed protein [Oryza sativa (japonica cultivar-group)]
Length=81

 Score = 63.2 bits (152),  Expect = 3e-10
 Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 0/57 (0%)
 Frame = +2

Query  2    ICINPEVRVNKENRAAGVLDNFAEGEKYAEHFVRKYVRNRAPEIMPSINSFFTDPKR  172
            +C NPEV+++K NR   V D+ AE E+Y+ H  R++   R PE+MPSIN FF++  R
Sbjct  16   VCTNPEVKISKRNRRNAVPDSAAEAERYSMHGFRRFFGRRRPEVMPSINRFFSNSDR  72


>gi|115454043|ref|NP_001050622.1|  Os03g0601500 [Oryza sativa (japonica cultivar-group)]
 gi|57222449|gb|AAP12919.2|  expressed protein [Oryza sativa (japonica cultivar-group)]
 gi|113549093|dbj|BAF12536.1|  Os03g0601500 [Oryza sativa (japonica cultivar-group)]
Length=84

 Score = 63.2 bits (152),  Expect = 3e-10
 Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 0/57 (0%)
 Frame = +2

Query  2    ICINPEVRVNKENRAAGVLDNFAEGEKYAEHFVRKYVRNRAPEIMPSINSFFTDPKR  172
            +C NPEV+++K NR   V D+ AE E+Y+ H  R++   R PE+MPSIN FF++  R
Sbjct  19   VCTNPEVKISKRNRRNAVPDSAAEAERYSMHGFRRFFGRRRPEVMPSINRFFSNSDR  75


>gi|115473249|ref|NP_001060223.1|  Os07g0604700 [Oryza sativa (japonica cultivar-group)]
 gi|34394573|dbj|BAC83876.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
 gi|113611759|dbj|BAF22137.1|  Os07g0604700 [Oryza sativa (japonica cultivar-group)]
Length=95

 Score = 62.0 bits (149),  Expect = 6e-10
 Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 0/55 (0%)
 Frame = +2

Query  2    ICINPEVRVNKENRAAGVLDNFAEGEKYAEHFVRKYVRNRAPEIMPSINSFFTDP  166
            + +NP+VRVNK +R + VL+N  EGEKY  H  R+++  + PE+ P+IN FF  P
Sbjct  31   VFMNPDVRVNKSHRQSAVLENADEGEKYHHHAFRRFLGTQRPEVFPAINRFFAGP  85


>gi|115471521|ref|NP_001059359.1|  Os07g0274400 [Oryza sativa (japonica cultivar-group)]
 gi|34395047|dbj|BAC84630.1|  putative B12D protein [Oryza sativa (japonica cultivar-group)]
 gi|50508847|dbj|BAD31622.1|  putative B12D protein [Oryza sativa (japonica cultivar-group)]
 gi|113610895|dbj|BAF21273.1|  Os07g0274400 [Oryza sativa (japonica cultivar-group)]
Length=89

 Score = 57.0 bits (136),  Expect = 2e-08
 Identities = 25/50 (50%), Positives = 39/50 (78%), Gaps = 0/50 (0%)
 Frame = +2

Query  2    ICINPEVRVNKENRAAGVLDNFAEGEKYAEHFVRKYVRNRAPEIMPSINS  151
            I  NPEVRV KENRAAGVL+NF EG++Y++H VR++  ++  + M ++++
Sbjct  32   ITTNPEVRVTKENRAAGVLENFDEGKRYSQHGVRRFWLSKRRDYMQALDN  81


>gi|115475652|ref|NP_001061422.1|  Os08g0271300 [Oryza sativa (japonica cultivar-group)]
 gi|113623391|dbj|BAF23336.1|  Os08g0271300 [Oryza sativa (japonica cultivar-group)]
Length=733

 Score = 28.1 bits (61),  Expect = 9.5
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 7/47 (14%)
 Frame = +2

Query  149  SFFTDPKRGLALLLLYVEMEMKIQKTKSCSIASDVLLSADYNRSCVN  289
            SF+TD K        Y+E   KIQK K+ S+    + S  Y  S  N
Sbjct  156  SFYTDAK-------FYIEPIEKIQKPKAKSLTEHFVTSGSYGESSSN  195

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 200
Number of extensions: 0
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 377
Length of database: 101054579
Length adjustment: 92
Effective length of query: 285
Effective length of database: 74986471
Effective search space: 2474553543
Effective search space used: 2474553543
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)