Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168943436-22125-11413354693.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig257 Length=1075
Score E Sequences producing significant alignments: (Bits) Value gi|54036493|sp|Q6VAG0|TBA2_GOSHI Tubulin alpha-2 chain (Alpha... 579 8e-165 gi|464849|sp|P33629|TBA_PRUDU Tubulin alpha chain >gi|20413|e... 578 1e-164 gi|54036492|sp|Q6VAF9|TBA4_GOSHI Tubulin alpha-4 chain (Alpha... 578 2e-164 gi|56481443|gb|AAV92352.1| alpha tubulin 1 [Pseudotsuga menzi... 576 5e-164 gi|1174592|sp|P46259|TBA1_PEA Tubulin alpha-1 chain >gi|525332|g 575 1e-163 gi|99082883|gb|ABC59068.2| alpha tubulin 1 [Camellia sinensis] 574 2e-163 gi|15029368|gb|AAK81858.1|AF394915_1 alpha tubulin subunit [Rosa 574 2e-163 gi|54036494|sp|Q6VAG1|TBA1_GOSHI Tubulin alpha-1 chain (Alpha... 573 3e-163 gi|92896308|gb|ABE93145.1| Cell division protein FtsZ [Medicago 573 5e-163 gi|6723478|emb|CAB66336.1| alpha-tubulin [Betula pendula] 572 7e-163 gi|29124983|gb|AAO63781.1| alpha-tubulin 1 [Populus tremuloides] 572 9e-163 gi|464840|sp|P33623|TBA1_ANEPH Tubulin alpha-1 chain >gi|2964... 572 1e-162 gi|25396550|dbj|BAC24800.1| alpha tubulin [Physcomitrella patens 571 2e-162 gi|11967906|dbj|BAB19779.1| alpha tubulin [Nicotiana tabacum] 568 2e-161 gi|57867851|gb|AAW57305.1| alpha-tubulin [Ceratopteris richardii 567 2e-161 gi|29423813|gb|AAO73546.1| alpha-tubulin [Ceratopteris richar... 567 2e-161 gi|17402467|emb|CAD13176.1| alpha-tubulin [Nicotiana tabacum] 567 3e-161 gi|51988174|emb|CAE52515.1| alpha tubulin [Setaria viridis] 567 4e-161 gi|6094429|sp|O22347|TBA1_ELEIN Tubulin alpha-1 chain (Alpha-... 567 4e-161 gi|135411|sp|P14641|TBA2_MAIZE Tubulin alpha-2 chain (Alpha-2... 566 5e-161 gi|77745465|gb|ABB02631.1| unknown [Solanum tuberosum] 565 9e-161 gi|8928432|sp|Q9ZRR5|TBA3_HORVU Tubulin alpha-3 chain >gi|416... 565 9e-161 gi|135398|sp|P14640|TBA1_MAIZE Tubulin alpha-1 chain (Alpha-1... 565 1e-160 gi|49036476|sp|Q9FT36|TBA_DAUCA Tubulin alpha chain >gi|99659... 565 1e-160 gi|3163946|emb|CAA06619.1| alpha-tubulin 1 [Eleusine indica] 564 2e-160 gi|8928409|sp|Q9ZRJ4|TBA_CHLVU Tubulin alpha chain >gi|416222... 564 3e-160 gi|15233627|ref|NP_193232.1| TUA6 [Arabidopsis thaliana] >gi|... 563 4e-160 gi|15220329|ref|NP_171974.1| TUA4 [Arabidopsis thaliana] >gi|... 563 6e-160 gi|17402471|emb|CAD13178.1| alpha-tubulin [Nicotiana tabacum] 562 7e-160 gi|108710846|gb|ABF98641.1| Tubulin alpha-1 chain, putative, ... 562 1e-159 gi|115455063|ref|NP_001051132.1| Os03g0726100 [Oryza sativa (... 562 1e-159 gi|8928408|sp|Q9ZRB7|TBA_WHEAT Tubulin alpha chain >gi|409827... 561 1e-159 gi|8928422|sp|Q96460|TBA2_HORVU Tubulin alpha-2 chain >gi|161... 561 1e-159 gi|27819095|gb|AAO23139.1| alpha tubulin [Populus tremuloides] 561 2e-159 gi|1136120|emb|CAA62916.1| alpha-tubulin [Oryza sativa (japonica 561 2e-159 gi|110617748|gb|ABG78593.1| alpha-tubulin [Oryza sativa (japonic 560 3e-159 gi|115484939|ref|NP_001067613.1| Os11g0247300 [Oryza sativa (... 560 3e-159 gi|62734654|gb|AAX96763.1| Tubulin/FtsZ family, GTPase domain... 560 3e-159 gi|110742192|dbj|BAE99023.1| tubulin alpha-2/alpha-4 chain [Arab 560 4e-159 gi|1101025|gb|AAB36609.1| alpha-tubulin [Eucalyptus globulus sub 560 5e-159 gi|34733239|gb|AAQ81585.1| putative tubulin alpha-2/alpha-4 chai 559 6e-159 gi|17402469|emb|CAD13177.1| alpha-tubulin [Nicotiana tabacum] 559 6e-159 gi|135404|sp|P11481|TBA1_VOLCA Tubulin alpha-1/alpha-2 chain ... 559 8e-159 gi|16226462|gb|AAL16174.1|AF428406_1 AT4g14960/dl3520c [Arabidop 558 1e-158 gi|25396545|dbj|BAC24799.1| alpha tubulin [Physcomitrella patens 558 1e-158 gi|37936210|emb|CAD24765.1| alpha-tubulin [Miscanthus sinensis] 558 2e-158 gi|401161|sp|Q02245|TBA5_MAIZE Tubulin alpha-5 chain (Alpha-5... 558 2e-158 gi|8928419|sp|Q43473|TBA1_HORVU Tubulin alpha-1 chain >gi|147... 558 2e-158 gi|464846|sp|P33627|TBA6_MAIZE Tubulin alpha-6 chain (Alpha-6... 558 2e-158 gi|62546341|gb|AAX86047.1| tubulin A [Glycine max] 557 2e-158 gi|135394|sp|P09204|TBA1_CHLRE Tubulin alpha-1 chain >gi|1674... 557 2e-158 gi|115472953|ref|NP_001060075.1| Os07g0574800 [Oryza sativa (... 557 2e-158 gi|1136122|emb|CAA62917.1| alfa-tubulin [Oryza sativa (japonica 556 4e-158 gi|37936228|emb|CAD26891.1| alpha-tubulin [Miscanthus floridulus 556 4e-158 gi|37936216|emb|CAD24768.1| alpha-tubulin [Miscanthus floridulus 556 4e-158 gi|6094431|sp|O22349|TBA3_ELEIN Tubulin alpha-3 chain (Alpha-... 556 5e-158 gi|37936220|emb|CAD26887.1| alpha-tubulin [Miscanthus sinensis] 556 7e-158 gi|82400128|gb|ABB72803.1| alpha-tubulin-like protein [Solanum t 556 7e-158 gi|77999295|gb|ABB16994.1| unknown [Solanum tuberosum] 556 7e-158 gi|37936218|emb|CAD26886.1| alpha-tubulin [Miscanthus sinensis] 555 2e-157 gi|37936226|emb|CAD26890.1| alpha-tubulin [Miscanthus sinensis v 554 3e-157 gi|7209196|emb|CAB76917.1| alpha-tubulin 4 [Hordeum vulgare subs 554 3e-157 gi|37936214|emb|CAD24767.1| alpha-tubulin [Miscanthus floridulus 554 3e-157 gi|4206112|gb|AAD11425.1| alpha tubulin [Mesembryanthemum crysta 553 3e-157 gi|37936232|emb|CAD26893.1| alpha-tubulin [Miscanthus floridulus 553 3e-157 gi|15241168|ref|NP_197478.1| TUA3 [Arabidopsis thaliana] >gi|... 553 3e-157 gi|116059394|emb|CAL55101.1| Beta tubulin (ISS) [Ostreococcus ta 553 4e-157 gi|2625156|gb|AAB86649.1| alpha-tubulin [Chloromonas sp. ANT1] 553 6e-157 gi|51988172|emb|CAE52514.1| alpha tubulin [Setaria viridis] 552 1e-156 gi|2625154|gb|AAB86648.1| alpha-tubulin [Chloromonas sp. ANT3] 551 1e-156 gi|135409|sp|P09205|TBA2_CHLRE Tubulin alpha-2 chain >gi|167450| 551 2e-156 gi|37936222|emb|CAD26888.1| alpha-tubulin [Miscanthus transmorri 551 2e-156 gi|1556446|gb|AAB08791.1| alpha tubulin [Hordeum vulgare] 551 2e-156 gi|37936212|emb|CAD24766.1| alpha-tubulin [Miscanthus sinensis] 551 2e-156 gi|37936230|emb|CAD26892.1| alpha-tubulin [Miscanthus floridulus 550 4e-156 gi|63126536|gb|AAX63396.1| alpha-tubulin [Haematococcus pluviali 548 1e-155 gi|116060752|emb|CAL57230.1| Beta tubulin (ISS) [Ostreococcus ta 546 5e-155 gi|2613143|gb|AAB84298.1| tubulin [Oryza sativa] 545 9e-155 gi|7271241|emb|CAB77671.1| alpha-tubulin [Miscanthus sinensis f. 542 1e-153 gi|8928404|sp|Q38771|TBA_AVESA Tubulin alpha chain >gi|127920... 542 1e-153 gi|464841|sp|P33624|TBA2_ANEPH Tubulin alpha-2 chain >gi|2964... 541 1e-153 gi|15217737|ref|NP_176654.1| TUA1 (ALPHA-1 TUBULIN) [Arabidop... 540 3e-153 gi|135417|sp|P22275|TBA3_MAIZE Tubulin alpha-3 chain (Alpha-3... 540 4e-153 gi|7271243|emb|CAB77672.1| alpha-tubulin [Miscanthus transmorris 538 1e-152 gi|226261|prf||1503274A alpha1 tubulin 537 3e-152 gi|6094430|sp|O22348|TBA2_ELEIN Tubulin alpha-2 chain (Alpha-... 537 3e-152 gi|83283967|gb|ABC01891.1| tubulin alpha-5 chain-like protein [S 534 2e-151 gi|115451599|ref|NP_001049400.1| Os03g0219300 [Oryza sativa (... 532 8e-151 gi|106879605|emb|CAJ38386.1| alpha tubulin [Plantago major] 529 7e-150 gi|108710848|gb|ABF98643.1| Tubulin alpha-1 chain, putative, ... 523 5e-148 gi|18157218|emb|CAD20821.1| alpha tubulin [Zea mays] 521 2e-147 gi|37936224|emb|CAD26889.1| alpha-tubulin [Miscanthus transmorri 518 2e-146 gi|57867861|gb|AAW57310.1| alpha-tubulin [Ceratopteris richar... 517 3e-146 gi|57867859|gb|AAW57309.1| alpha-tubulin [Ceratopteris richardii 514 2e-145 gi|76257861|gb|ABA41248.1| alpha-tubulin [Pterosperma cristatum] 510 3e-144 gi|37789885|gb|AAP32191.1| alpha-tubulin [Trifolium repens] 509 6e-144 gi|76257847|gb|ABA41241.1| alpha-tubulin [Coleochaete scutata] 509 1e-143 gi|76257851|gb|ABA41243.1| alpha-tubulin [Mantoniella squamata] 507 3e-143 gi|92881795|gb|ABE86411.1| Cell division protein FtsZ [Medicago 505 1e-142 gi|7024445|dbj|BAA92148.1| alpha-tubulin ['Chlorella' ellipsoide 505 1e-142
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 756 Number of extensions: 7 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 1075 Length of database: 101054579 Length adjustment: 114 Effective length of query: 961 Effective length of database: 68752793 Effective search space: 16775681492 Effective search space used: 16775681492 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 68 (30.8 bits)