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BLASTX 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168929759-21036-132498052157.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig26
Length=501


Distribution of 54 Blast Hits on the Query Sequence



                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|18423709|ref|NP_568820.1|  RNA binding [Arabidopsis thalian...  37.4    0.028 UniGene infoGene info
gi|30696564|ref|NP_851194.1|  RNA binding [Arabidopsis thaliana]   37.4    0.028 UniGene infoGene info
gi|9758107|dbj|BAB08579.1|  unnamed protein product [Arabidopsis   37.4    0.028
gi|30681829|ref|NP_850032.1|  unknown protein [Arabidopsis thalia  34.7    0.18  UniGene infoGene info
gi|8096269|dbj|BAA95789.1|  KED [Nicotiana tabacum]                34.7    0.18  UniGene info
gi|6634708|gb|AAF19721.1|AF176782_1  MADS box transcription facto  33.9    0.31 
gi|15235717|ref|NP_195495.1|  unknown protein [Arabidopsis tha...  33.1    0.53  UniGene infoGene info
gi|15241487|ref|NP_196418.1|  unknown protein [Arabidopsis tha...  32.7    0.69  UniGene infoGene info
gi|1154629|emb|CAA64428.1|  pollen coat protein [Brassica olerace  32.7    0.69 
gi|18411211|ref|NP_565140.1|  unknown protein [Arabidopsis tha...  32.3    0.90  UniGene infoGene info
gi|9558597|gb|AAF88160.1|AC026234_11  Contains weak similarity...  32.3    0.90 
gi|92894451|gb|ABE92235.1|  hypothetical protein MtrDRAFT_AC14...  32.0    1.2  
gi|403336|emb|CAA81262.1|  legumin; legumin-related high molec...  32.0    1.2  
gi|92871914|gb|ABE80789.1|  Prefoldin [Medicago truncatula]        31.6    1.5  
gi|15235325|ref|NP_193749.1|  unknown protein [Arabidopsis tha...  31.2    2.0   UniGene infoGene info
gi|110741690|dbj|BAE98791.1|  hypothetical protein [Arabidopsis t  30.8    2.6  
gi|12002141|gb|AAG43200.1|AF112150_1  MADS box protein 3 [Zea may  30.8    2.6   UniGene infoGene info
gi|4914334|gb|AAD32882.1|AC005489_20  F14N23.20 [Arabidopsis thal  30.8    2.6  
gi|15218489|ref|NP_172503.1|  RNA binding / nucleic acid binding   30.8    2.6   UniGene infoGene info
gi|92890566|gb|ABE90421.1|  hypothetical protein MtrDRAFT_AC14...  30.4    3.4  
gi|42569661|ref|NP_181151.3|  ATTIM44-2 [Arabidopsis thaliana]...  30.4    3.4   UniGene infoGene info
gi|87240431|gb|ABD32289.1|  Tropomyosin; tRNA-binding arm; t-snar  30.4    3.4  
gi|92893751|gb|ABE91887.1|  hypothetical protein MtrDRAFT_AC14...  30.0    4.5  
gi|92890422|gb|ABE90364.1|  Protein kinase [Medicago truncatula]   30.0    4.5  
gi|2245100|emb|CAB10522.1|  DNA-binding protein homolog [Arabi...  30.0    4.5  
gi|15236068|ref|NP_193471.1|  unknown protein [Arabidopsis thalia  30.0    4.5   UniGene infoGene info
gi|15241164|ref|NP_200438.1|  WRKY2; transcription factor [Ara...  30.0    4.5   UniGene infoGene info
gi|13676415|dbj|BAB41198.1|  hypothetical protein [Glycine max]    30.0    4.5  
gi|92871557|gb|ABE80504.1|  Retrotransposon gag protein; Retro...  29.6    5.8  
gi|15242707|ref|NP_198861.1|  unknown protein [Arabidopsis tha...  29.6    5.8   UniGene infoGene info
gi|28393775|gb|AAO42297.1|  unknown protein [Arabidopsis thaliana  29.6    5.8   UniGene info
gi|30699400|ref|NP_178040.2|  unknown protein [Arabidopsis thalia  29.6    5.8   UniGene infoGene info
gi|15219083|ref|NP_173593.1|  unknown protein [Arabidopsis tha...  29.6    5.8   UniGene infoGene info
gi|92881216|gb|ABE86107.1|  Ubiquitin [Medicago truncatula]        29.3    7.6  
gi|62751091|dbj|BAD95793.1|  hypothetical protein [Solanum lycope  29.3    7.6   UniGene infoGene info
gi|18399981|ref|NP_566455.1|  unknown protein [Arabidopsis tha...  29.3    7.6   UniGene infoGene info
gi|55741065|gb|AAV64207.1|  putative paramyosin [Zea mays] >gi...  29.3    7.6  
gi|1905934|gb|AAB50181.1|  MADS box protein                        29.3    7.6   UniGene info
gi|27804371|gb|AAO22987.1|  MADS-box transcription factor CDM1...  29.3    7.6  
gi|28381535|gb|AAF12699.2|  PTM1 [Populus tremuloides]             29.3    7.6  
gi|87162938|gb|ABD28733.1|  conserved hypothetical protein [Me...  29.3    7.6  
gi|42572369|ref|NP_974280.1|  DNA binding / protein binding / ...  29.3    7.6   UniGene infoGene info
gi|15229696|ref|NP_187729.1|  DNA binding / protein binding / ...  29.3    7.6   UniGene infoGene info
gi|50470538|emb|CAH04879.1|  MADS domain protein [Gerbera hybrid   29.3    7.6  
gi|9294542|dbj|BAB02805.1|  unnamed protein product [Arabidopsis   29.3    7.6  
gi|37905913|gb|AAO38853.1|  dehydrin-like protein [Capsicum annuu  28.9    10.0 
gi|18401896|ref|NP_565678.1|  CXIP4 (CAX INTERACTING PROTEIN 4...  28.9    10.0  UniGene infoGene info
gi|3152582|gb|AAC17063.1|  YUP8H12R.20 [Arabidopsis thaliana]      28.9    10.0 
gi|27651999|gb|AAO17572.1|  CAX-interacting protein 4 [Arabidopsi  28.9    10.0  UniGene info
gi|3395938|gb|AAC62015.1|  polypyrimidine tract-binding protei...  28.9    10.0  UniGene info
gi|115470767|ref|NP_001058982.1|  Os07g0168000 [Oryza sativa (...  28.9    10.0  Gene info
gi|18399977|ref|NP_566454.1|  transcription factor [Arabidopsi...  28.9    10.0  UniGene infoGene info
Alignments
>gi|18423709|ref|NP_568820.1| UniGene infoGene info RNA binding [Arabidopsis thaliana] gi|14532720|gb|AAK64161.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|20465891|gb|AAM20098.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] Length=844 Score = 37.4 bits (85), Expect = 0.028 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Frame = +1 Query 10 SQETSQVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQSNEK 189 ++ET HS K KH Y K +KH HE S + S + +S+++ Sbjct 645 TEETKTDKKHSCSRKRHKHKTRYSSKDRHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDR 704 Query 190 -ELVQHPESEEQDKHLKFRVSHELD 261 EL ++E + +H + S ++D Sbjct 705 HELYDSSDNEGEHRHRSSKHSKDVD 729 >gi|30696564|ref|NP_851194.1| UniGene infoGene info RNA binding [Arabidopsis thaliana] Length=843 Score = 37.4 bits (85), Expect = 0.028 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Frame = +1 Query 10 SQETSQVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQSNEK 189 ++ET HS K KH Y K +KH HE S + S + +S+++ Sbjct 645 TEETKTDKKHSCSRKRHKHKTRYSSKDRHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDR 704 Query 190 -ELVQHPESEEQDKHLKFRVSHELD 261 EL ++E + +H + S ++D Sbjct 705 HELYDSSDNEGEHRHRSSKHSKDVD 729 >gi|9758107|dbj|BAB08579.1| unnamed protein product [Arabidopsis thaliana] Length=875 Score = 37.4 bits (85), Expect = 0.028 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Frame = +1 Query 10 SQETSQVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQSNEK 189 ++ET HS K KH Y K +KH HE S + S + +S+++ Sbjct 676 TEETKTDKKHSCSRKRHKHKTRYSSKDRHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDR 735 Query 190 -ELVQHPESEEQDKHLKFRVSHELD 261 EL ++E + +H + S ++D Sbjct 736 HELYDSSDNEGEHRHRSSKHSKDVD 760 >gi|30681829|ref|NP_850032.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] Length=734 Score = 34.7 bits (78), Expect = 0.18 Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 10/99 (10%) Frame = +1 Query 4 KDSQETSQVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQSN 183 KD++E+S + ETK +++ K K +AS + +E ++E + SS+ + + Sbjct 528 KDNEESSSQE----ETKDKENEKIEKEEASSQEESKENETETKEKEESSSQ---EETKEK 580 Query 184 EKELVQHPES--EEQDKHLKFRVSHELDSASSEVN*KEK 294 E E ++ ES +E+ K + + +SAS E KEK Sbjct 581 ENEKIEKEESAPQEETKEKENEKIEKEESASQEET-KEK 618 Score = 29.6 bits (65), Expect = 5.8 Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 6/94 (6%) Frame = +1 Query 7 DSQETSQVDDHSMETKSRKHSKEYKLKASDEN----NKHSHEIGSQESSDVSSELVGQTV 174 DS E + + SME K+ KE+ + + + S + GSQE+S+VSS+ + Sbjct 373 DSLEGIKSEGESME-KNELLEKEFNDSNGESSVTGKSTGSGDGGSQETSEVSSQEESKGK 431 Query 175 QSNEKELVQHPESEEQDKHLKFRVSHELDSASSE 276 +S K+ + S+E+ K + + +S+S E Sbjct 432 ESETKD-KEESSSQEESKDRETETKEKEESSSQE 464 >gi|8096269|dbj|BAA95789.1| UniGene info KED [Nicotiana tabacum] Length=513 Score = 34.7 bits (78), Expect = 0.18 Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 3/98 (3%) Frame = +1 Query 4 KDSQETS-QVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQS 180 ++S+ET + D + K +K+ KE K K E S E S+E ++ + + Sbjct 33 EESEETEDEKDGATKNVKEKKYKKEKKEKKDKEKKDKSKEEESEEETEEEKD--DGKGKK 90 Query 181 NEKELVQHPESEEQDKHLKFRVSHELDSASSEVN*KEK 294 ++K+ + E++DK +K + HE + S+ +EK Sbjct 91 DKKKKHKTDMKEKKDKEMKDKSKHESEKEDSKEIEEEK 128 Score = 31.2 bits (69), Expect = 2.0 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 5/80 (6%) Frame = +1 Query 4 KDSQETSQVDDHSMETKSRKHSKEYKLK-----ASDENNKHSHEIGSQESSDVSSELVGQ 168 KD ++ + D K++K K+ + K SDE + E G ++ + Sbjct 264 KDDEKGEKKDKEKKCKKNKKEKKDKETKDKSKEVSDEEEEKDDEEGEKKDKKKKHNKDKK 323 Query 169 TVQSNEKELVQHPESEEQDK 228 + EK+ ESEE+DK Sbjct 324 ETKDKEKKYKSKEESEEEDK 343 >gi|6634708|gb|AAF19721.1|AF176782_1 MADS box transcription factor [Petunia x hybrida] Length=246 Score = 33.9 bits (76), Expect = 0.31 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 13/93 (13%) Frame = +1 Query 1 VKDSQETSQVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQS 180 +KD Q Q D S+ KH + K + E+ + +S + L+ + V+ Sbjct 122 MKDLQNLEQQLDSSL-----KHIRSRKNQLMHESISELQK--KDKSLQEQNNLLSKKVKE 174 Query 181 NEKELVQHPESEEQDKHLKFRVSHELDSASSEV 279 EKEL Q + E+Q+ H HE++S+SS V Sbjct 175 REKELAQQTQWEQQNNH------HEINSSSSFV 201 >gi|15235717|ref|NP_195495.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|4490727|emb|CAB38930.1| Gene info putative protein [Arabidopsis thaliana] gi|7270765|emb|CAB80447.1| Gene info putative protein [Arabidopsis thaliana] gi|26450588|dbj|BAC42406.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] Length=532 Score = 33.1 bits (74), Expect = 0.53 Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 12/108 (11%) Frame = +1 Query 7 DSQETSQVDDHSMETKSRKHSKEYKLKASDENNK------------HSHEIGSQESSDVS 150 ++ E D ETKS SK + SD N + + E + S S Sbjct 225 NTTENGSDDGEQQETKSELDSKTGEKGFSDSNGELPETNLSTSNATETTESSGSDESGSS 284 Query 151 SELVGQTVQSNEKELVQHPESEEQDKHLKFRVSHELDSASSEVN*KEK 294 + G NE++ + +S E++ +K +E D++SS+ KE+ Sbjct 285 GKSTGYQQTKNEEDEKEKVQSSEEESKVKESGKNEKDASSSQDESKEE 332 >gi|15241487|ref|NP_196418.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|6562315|emb|CAB62613.1| Gene info putative protein [Arabidopsis thaliana] Length=566 Score = 32.7 bits (73), Expect = 0.69 Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 5/102 (4%) Frame = +1 Query 7 DSQETSQVDDHSMETKSRKHSKEYKL--KASDENNKHSHEIGSQESSDVSSELVGQTVQS 180 D + S+ DD + + +E L K+S ++K + S+ S DV+ ++ + Sbjct 460 DINDYSEEDDLQCVMQENERQEELSLTSKSSPWSHKDYIKDSSRTSEDVNLSMLQDLLGL 519 Query 181 NEKELVQHPESEEQDKHLKFRVSHELDSASSEVN*KEKMQFL 306 +++E E +E +KHL ++ + SS V +KM FL Sbjct 520 SDEE---EEEEDEMEKHLIKQIVEKTKQGSSAVLNAQKMLFL 558 >gi|1154629|emb|CAA64428.1| pollen coat protein [Brassica oleracea] Length=199 Score = 32.7 bits (73), Expect = 0.69 Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 12/118 (10%) Frame = +1 Query 10 SQETSQVDDHSMETKSRKHSKEYKLKASDEN-----NKHSHEIGSQESSDVSSELVGQTV 174 ++ET V +H + + S + +D K E +E+ D SE + Sbjct 2 AEETKNVHEHEAPKVATEESSTATGEVTDRGLFDFLGKKKDETKPEETID--SEFEQKVH 59 Query 175 QSNEKELVQHPESEEQDKHLKFRVSHELDSASSEVN*KEKMQFLTLLLVKRRKIRDSK 348 S V+H E +E+ KH H DS+SS + +E VKR+K +D K Sbjct 60 ISEPVPEVKHEEEKEEKKHSLLEKLHRSDSSSSSSSEEEGEDG-----VKRKKKKDKK 112 >gi|18411211|ref|NP_565140.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|14190523|gb|AAK55742.1|AF380661_1 UniGene infoGene info At1g76820/F28O16_19 [Arabidopsis thaliana] gi|15810117|gb|AAL06984.1| UniGene infoGene info At1g76820/F28O16_19 [Arabidopsis thaliana] Length=266 Score = 32.3 bits (72), Expect = 0.90 Identities = 30/125 (24%), Positives = 45/125 (36%), Gaps = 4/125 (3%) Frame = +1 Query 4 KDSQETSQVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQSN 183 K S + + D SK +L S + KH + S + +L + Sbjct 141 KSSSVLASIGDEESSQSKTSDSKSVELVESARSKKHKKKNKSGRTLQEDDDLDKLLAELG 200 Query 184 EKELVQHPESEEQDKHLKFRVSHELDSASSEVN*KEKMQFLTLLLVKRRKIRDSKMGDNM 363 E P SEE+ K + E + KEK + L LL ++RK R K Sbjct 201 ETPAAGKPASEEE----KDQAQPEPVAPVENTGEKEKRRLLRLLQPRKRKRRRRKKRKKK 256 Query 364 KCLFL 378 + L L Sbjct 257 QLLLL 261 >gi|9558597|gb|AAF88160.1|AC026234_11 Contains weak similarity to an unknown protein T23E18.5 gi|6573728 from Arabidopsis thaliana BAC T23E18 gb|AC009978. EST gb|W43440 comes from this gene Length=409 Score = 32.3 bits (72), Expect = 0.90 Identities = 18/110 (16%), Positives = 46/110 (41%), Gaps = 0/110 (0%) Frame = +1 Query 4 KDSQETSQVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQSN 183 ++ +E + ++ E + + +E + + +E + E +E + E + + Sbjct 298 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 357 Query 184 EKELVQHPESEEQDKHLKFRVSHELDSASSEVN*KEKMQFLTLLLVKRRK 333 E+E + E EE+++ + E + E +EK + K+R+ Sbjct 358 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKYMIVKKKKKKRR 407 >gi|92894451|gb|ABE92235.1| hypothetical protein MtrDRAFT_AC144731g21v1 [Medicago truncatula] Length=319 Score = 32.0 bits (71), Expect = 1.2 Identities = 36/140 (25%), Positives = 55/140 (39%), Gaps = 25/140 (17%) Frame = +1 Query 7 DSQETSQVDDHSMETKSRKHSKEYK---------LKASDENNKHSHEIGSQESSDVSS-E 156 D+ DD R H K K K ++++K + S ESSD SS E Sbjct 60 DTDSDRDSDDERKRASKRSHRKHRKHSHIDSGDHEKRKEKSSKWKTKKRSSESSDFSSDE 119 Query 157 LVGQTVQSNEKELVQHPESEEQDKHLKFRVSHELDSASSEVN*KEKMQFLTLLLVKRRKI 336 + + ++ Q + +QD S DS + EVN +++ + R+ Sbjct 120 SESSSEEEKRRKKKQRKKIRDQDSRSN---SSGSDSYADEVNKRKR---------RHRRR 167 Query 337 RDSKMGDNMKCLFLSLVGEC 396 R SK D+ F S GEC Sbjct 168 RPSKFSDSD---FYSDEGEC 184 >gi|403336|emb|CAA81262.1| legumin; legumin-related high molecular weight polypeptide [Vicia faba var. minor] Length=564 Score = 32.0 bits (71), Expect = 1.2 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%) Frame = +1 Query 16 ETSQVDDHSMETKSRKHSKEYKLKASDENNKHSHEI--GSQESSDVSSELVGQTVQSNEK 189 E D+ E + ++H K K + DE+ S+E + + + E G+ + E+ Sbjct 304 EKEDEDEDEKEEQEQRHGKHSKKEEEDEDEPRSYESRKWKKHTEEKKRESHGRGEEKQEQ 363 Query 190 ELVQHPESEEQDKHLK 237 E + E E Q +H K Sbjct 364 EKKEEEEEEIQRQHSK 379 >gi|92871914|gb|ABE80789.1| Prefoldin [Medicago truncatula] Length=612 Score = 31.6 bits (70), Expect = 1.5 Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 10/95 (10%) Frame = +1 Query 25 QVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQSNEKE---- 192 Q +D E S++ + +LK D N KH ++ ++E + G+ + KE Sbjct 24 QFEDRVTELDSKEKQCDRRLKELDSNEKH-FKVRAKELESKQEKFEGRVKEITSKEEAFE 82 Query 193 -LVQHPESEEQDKHLKFRVSHELDSASSEVN*KEK 294 V+ ES+E+D F+V + +S ++ +EK Sbjct 83 GRVKEFESKEED----FKVQVKFESEKKDLERQEK 113 >gi|15235325|ref|NP_193749.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|2982433|emb|CAA18241.1| Gene info Glu-rich protein [Arabidopsis thaliana] gi|7268811|emb|CAB79016.1| Gene info Glu-rich protein [Arabidopsis thaliana] Length=1188 Score = 31.2 bits (69), Expect = 2.0 Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 1/83 (1%) Frame = +1 Query 31 DDHSMETKSRKHSKEYKLKASDENNKH-SHEIGSQESSDVSSELVGQTVQSNEKELVQHP 207 + + TK + +K ++ +E+ H S E +++S + N+K+ ++ P Sbjct 827 NSEAKSTKEIERNKSQEVSQGEESASHGSRESAKEKNSSQQDDETSTHRNPNDKKGIKEP 886 Query 208 ESEEQDKHLKFRVSHELDSASSE 276 E EE K + ++ AS E Sbjct 887 EDEESKKVEREETGENVEEASVE 909 >gi|110741690|dbj|BAE98791.1| hypothetical protein [Arabidopsis thaliana] Length=374 Score = 30.8 bits (68), Expect = 2.6 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 12/84 (14%) Frame = +1 Query 7 DSQETSQVD---DHSMETKSRKHSKEYKLKASDENNKH---------SHEIGSQESSDVS 150 DS Q+D D SRKHS+E +E ++H SH S+ + S Sbjct 203 DSGVQEQMDNEKDRKTHRSSRKHSREGSSADKEEGHEHDRVHTVSDKSHRERSKHRHERS 262 Query 151 SELVGQTVQSNEKELVQHPESEEQ 222 S S E QH ES+++ Sbjct 263 SSRYSHEEDSTESRHHQHKESDKK 286 >gi|12002141|gb|AAG43200.1|AF112150_1 UniGene infoGene info MADS box protein 3 [Zea mays] Length=270 Score = 30.8 bits (68), Expect = 2.6 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 19/100 (19%) Frame = +1 Query 79 KLKASDENNKHSHEIGSQESSDVSSELVGQTVQS-NEKELVQHPESEEQD-KHLKFRVSH 252 KLKA E + H+ L+G+ ++S N KEL Q + E KH++ R SH Sbjct 97 KLKAKIETIQRCHK-----------HLMGEDLESLNPKELQQLEQQLESSLKHIRSRKSH 145 Query 253 ELDSASSEVN*KEKMQFLTLLLVKRRKIRDSKMGDNMKCL 372 + + SE+ KE+ L + KI ++ + K + Sbjct 146 LMAESISELQKKERS------LQEENKILQKELSERQKAV 179 >gi|4914334|gb|AAD32882.1|AC005489_20 F14N23.20 [Arabidopsis thaliana] Length=836 Score = 30.8 bits (68), Expect = 2.6 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 12/84 (14%) Frame = +1 Query 7 DSQETSQVD---DHSMETKSRKHSKEYKLKASDENNKH---------SHEIGSQESSDVS 150 DS Q+D D SRKHS+E +E ++H SH S+ + S Sbjct 665 DSGVQEQMDNEKDRKTHRSSRKHSREGSSADKEEGHEHDRVHTVSDKSHRERSKHRHERS 724 Query 151 SELVGQTVQSNEKELVQHPESEEQ 222 S S E QH ES+++ Sbjct 725 SSRYSHEEDSTESRHHQHKESDKK 748 >gi|15218489|ref|NP_172503.1| UniGene infoGene info RNA binding / nucleic acid binding [Arabidopsis thaliana] Length=757 Score = 30.8 bits (68), Expect = 2.6 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 12/84 (14%) Frame = +1 Query 7 DSQETSQVD---DHSMETKSRKHSKEYKLKASDENNKH---------SHEIGSQESSDVS 150 DS Q+D D SRKHS+E +E ++H SH S+ + S Sbjct 586 DSGVQEQMDNEKDRKTHRSSRKHSREGSSADKEEGHEHDRVHTVSDKSHRERSKHRHERS 645 Query 151 SELVGQTVQSNEKELVQHPESEEQ 222 S S E QH ES+++ Sbjct 646 SSRYSHEEDSTESRHHQHKESDKK 669 >gi|92890566|gb|ABE90421.1| hypothetical protein MtrDRAFT_AC146940g22v2 [Medicago truncatula] Length=624 Score = 30.4 bits (67), Expect = 3.4 Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 10/99 (10%) Frame = +1 Query 25 QVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQSNEKE---- 192 Q +D E S++ + +LK D N KH ++ ++E + G+ + KE Sbjct 10 QFEDRVTELDSKEKQCDRRLKELDSNEKH-FKVRAKELESKQEKFEGRVKEITSKEEAFE 68 Query 193 -LVQHPESEEQDKHLKFRVSH----ELDSASSEVN*KEK 294 V+ ES+E+D ++ + S+ E +S ++ +EK Sbjct 69 GRVKEFESKEEDFKVQVKRSYLRVNEFESEKKDLERQEK 107 >gi|42569661|ref|NP_181151.3| UniGene infoGene info ATTIM44-2 [Arabidopsis thaliana] gi|53828527|gb|AAU94373.1| UniGene infoGene info At2g36070 [Arabidopsis thaliana] Length=469 Score = 30.4 bits (67), Expect = 3.4 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = +1 Query 52 KSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQSNEKELVQHPESEEQDKH 231 K S + K A+ E K S ++G +ES++ +S G EK+ Q +EEQD Sbjct 113 KKVSSSVKDKFSAATEEVKESFKLGKEESAESASSS-GTGTTEGEKQQQQSGSTEEQDTF 171 Query 232 L-KFRVS 249 KF+ S Sbjct 172 FGKFKSS 178 >gi|87240431|gb|ABD32289.1| Tropomyosin; tRNA-binding arm; t-snare [Medicago truncatula] Length=992 Score = 30.4 bits (67), Expect = 3.4 Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 8/109 (7%) Frame = +1 Query 10 SQETSQVDDHSMETKSRKHSKEYKLKASDEN-NKHSHEIGSQESSDVSSELVGQT----V 174 S +T + DD S+E ++D++ N+H ESS+V S+LV V Sbjct 280 SDDTEKRDDTDTSVLHSIASEESN--STDQSYNEHQSIATPNESSEVVSDLVSHDNETIV 337 Query 175 QSNEKELVQHPESEEQDKHLKFRVS-HELDSASSEVN*KEKMQFLTLLL 318 + NE++ + E++ +++HL + H+ DS K +M+ + L Sbjct 338 EENERDHANNIETDIKEQHLSSTQNMHDSDSKLELERVKREMKMMEAAL 386 >gi|92893751|gb|ABE91887.1| hypothetical protein MtrDRAFT_AC144806g2v1 [Medicago truncatula] Length=667 Score = 30.0 bits (66), Expect = 4.5 Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 23/137 (16%) Frame = +1 Query 1 VKDSQETSQVDDHSMETKSRKHSKEYKLKASDENN--------------KHSHEIGSQES 138 V + SQ + S+ET++ S + + +N SH+ GS+ Sbjct 220 VSEEMSVSQNEGGSIETENAGASSQTESNVVSQNTDEVEVSSLNKADCESQSHDSGSEVK 279 Query 139 SDVSSELVGQTVQSNEKELVQHPESEEQDKHLKFRVSHELDSASSEVN*KEKMQFLTLLL 318 S + +++ + E V H E +D L + S E + S+E ++ Sbjct 280 STDAEDVLQADPKEEGSENVNHVEVSREDSSLNLQDSFETCADSNEAGSEQ--------- 330 Query 319 VKRRKIRDSKMGDNMKC 369 ++ K DS +N +C Sbjct 331 LEPEKTSDSAEIENKEC 347 >gi|92890422|gb|ABE90364.1| Protein kinase [Medicago truncatula] Length=610 Score = 30.0 bits (66), Expect = 4.5 Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 3/91 (3%) Frame = +1 Query 4 KDSQETSQVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQSN 183 +D++ET + S KS S++ + + NN S ESS E+ G Q + Sbjct 436 QDAKETKEFYSKS-SCKSSTKSRKGTVSSGRRNNSSSDSENDHESSRRKHEVDGSLTQKS 494 Query 184 EKELVQHPESEEQDKHLKFRVSHELDSASSE 276 K+ S++ K K V+ +L SS+ Sbjct 495 SKKSAARDLSQKSSK--KSTVTKDLSQKSSK 523 >gi|2245100|emb|CAB10522.1| DNA-binding protein homolog [Arabidopsis thaliana] gi|7268493|emb|CAB78744.1| DNA-binding protein homolog [Arabidopsis thaliana] Length=459 Score = 30.0 bits (66), Expect = 4.5 Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 3/88 (3%) Frame = +1 Query 10 SQETSQVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQSN-E 186 S T ++DD++ + S + ++S + K S + S V+ G+ S E Sbjct 350 SDPTVEIDDNNKSNVFTRIS--FPEESSGKQRKTSKSSPAPPESSVAPVSSGRRHHSRRE 407 Query 187 KELVQHPESEEQDKHLKFRVSHELDSAS 270 +E+V++ S+++D+H K + S S S Sbjct 408 REMVEYDSSDDEDRHFKRKPSRYKRSPS 435 >gi|15236068|ref|NP_193471.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] Length=744 Score = 30.0 bits (66), Expect = 4.5 Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 3/88 (3%) Frame = +1 Query 10 SQETSQVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQSN-E 186 S T ++DD++ + S + ++S + K S + S V+ G+ S E Sbjct 635 SDPTVEIDDNNKSNVFTRIS--FPEESSGKQRKTSKSSPAPPESSVAPVSSGRRHHSRRE 692 Query 187 KELVQHPESEEQDKHLKFRVSHELDSAS 270 +E+V++ S+++D+H K + S S S Sbjct 693 REMVEYDSSDDEDRHFKRKPSRYKRSPS 720 >gi|15241164|ref|NP_200438.1| UniGene infoGene info WRKY2; transcription factor [Arabidopsis thaliana] gi|29839620|sp|Q9FG77|WRKY2_ARATH Gene info Probable WRKY transcription factor 2 (WRKY DNA-binding protein 2) gi|15991724|gb|AAL13039.1|AF418308_1 UniGene infoGene info WRKY transcription factor 2 [Arabidopsis thaliana] gi|9758400|dbj|BAB08871.1| Gene info transcription factor NtWRKY4-like [Arabidopsis thaliana] gi|20465416|gb|AAM20132.1| UniGene infoGene info putative transcription factor NtWRKY4 [Arabidopsis thaliana] gi|21689791|gb|AAM67539.1| UniGene infoGene info putative transcription factor NtWRKY4 [Arabidopsis thaliana] Length=687 Score = 30.0 bits (66), Expect = 4.5 Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 0/71 (0%) Frame = +1 Query 16 ETSQVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQSNEKEL 195 E VD + +S H ++K EN + S+ G + + + E Sbjct 191 EMMSVDYGNYNNRSSSHQSAEEVKPGSENIESSNLYGIETDNQNGQNKTSDVTTNTSLET 250 Query 196 VQHPESEEQDK 228 V H E EE+ + Sbjct 251 VDHQEEEEEQR 261 >gi|13676415|dbj|BAB41198.1| hypothetical protein [Glycine max] Length=1351 Score = 30.0 bits (66), Expect = 4.5 Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Frame = +1 Query 10 SQETSQVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSS 153 ++E S+V DH +E + H K + +S+ + + +E+ S++S DV++ Sbjct 761 AEEESKVHDHRLEGNTSDHDKT-QAASSELHEEAKNELSSEKSEDVNN 807 >gi|92871557|gb|ABE80504.1| Retrotransposon gag protein; Retrovirus capsid, C-terminal [Medicago truncatula] Length=346 Score = 29.6 bits (65), Expect = 5.8 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 0/56 (0%) Frame = +1 Query 19 TSQVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQSNE 186 T+Q H +K S+EYK + +D N+ + ++ S+ D + +T + E Sbjct 19 TAQKPKHHNRIPKQKLSEEYKDEDNDNNSTDADDVDSESQEDQHRQFEDETEEEEE 74 >gi|15242707|ref|NP_198861.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|10178157|dbj|BAB11602.1| Gene info unnamed protein product [Arabidopsis thaliana] Length=2910 Score = 29.6 bits (65), Expect = 5.8 Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 12/104 (11%) Frame = +1 Query 13 QETSQVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQSNEKE 192 +E+SQ ++ ETK KH + ++E K S E+ S+ S EL G+TV E Sbjct 987 EESSQPNEQEKETKLEKH------EPTNEEVK-SDEVIEVLSASPSKELEGETVVEAE-N 1038 Query 193 LVQHPESEEQDKHLKFRVSHE----LDSASSEVN*KEKMQFLTL 312 + E+EE+ K + S E ++S SS + E+ +T+ Sbjct 1039 IENIKENEEEQAAEKIQKSLETVQTVESPSSLLFSSEEQDHVTV 1082 >gi|28393775|gb|AAO42297.1| UniGene info unknown protein [Arabidopsis thaliana] Length=1093 Score = 29.6 bits (65), Expect = 5.8 Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 32/178 (17%) Frame = +1 Query 1 VKDSQETSQVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQS 180 ++D +S ++ + +TKS+KH + + + S SQ SD +E+ Q + + Sbjct 75 LEDEANSSALEISNGDTKSQKHESAHSIL----DELRSLTTKSQGQSDELTEITNQEIVN 130 Query 181 NEKELVQHPESE----EQDKHLKFRVSHELDSASSEVN*KEKMQFLTLLLVKRRKIR--- 339 + PE +D L R LDS +S VN F +L+ KIR Sbjct 131 -----INVPEKSNLNLSRDSFLVERTKKWLDSTTSHVNKLLCETFPHILIHPAGKIRWGF 185 Query 340 -------DSKMGDNMKCLFLSLVGECICIWDLE--------IDTIFDH*FSVSLHGNI 468 SK ++K L ++ EC+C ++ DH FS S ++ Sbjct 186 LAAIRGLLSKSSCSLKGARLVML-ECVCTLAVDDSDEVSVAAQEFLDHLFSESTKNHV 242 >gi|30699400|ref|NP_178040.2| UniGene infoGene info unknown protein [Arabidopsis thaliana] Length=1274 Score = 29.6 bits (65), Expect = 5.8 Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 32/178 (17%) Frame = +1 Query 1 VKDSQETSQVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQS 180 ++D +S ++ + +TKS+KH + + + S SQ SD +E+ Q + + Sbjct 317 LEDEANSSALEISNGDTKSQKHESAHSIL----DELRSLTTKSQGQSDELTEITNQEIVN 372 Query 181 NEKELVQHPESE----EQDKHLKFRVSHELDSASSEVN*KEKMQFLTLLLVKRRKIR--- 339 + PE +D L R LDS +S VN F +L+ KIR Sbjct 373 -----INVPEKSNLNLSRDSFLVERTKKWLDSTTSHVNKLLCETFPHILIHPAGKIRWGF 427 Query 340 -------DSKMGDNMKCLFLSLVGECICIWDLE--------IDTIFDH*FSVSLHGNI 468 SK ++K L ++ EC+C ++ DH FS S ++ Sbjct 428 LAAIRGLLSKSSCSLKGARLVML-ECVCTLAVDDSDEVSVAAQEFLDHLFSESTKNHV 484 >gi|15219083|ref|NP_173593.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|5263327|gb|AAD41429.1|AC007727_18 Gene info EST gb|T20649 comes from this gene. [Arabidopsis thaliana] Length=953 Score = 29.6 bits (65), Expect = 5.8 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 12/60 (20%) Frame = +1 Query 91 SDENNKHSHEIGSQESSDVSSELVGQTVQSNEKELVQHPESEEQDKHLKFRVSHELDSAS 270 SDE H H+I S +S V +V ++ E E +D+HL ELDS S Sbjct 80 SDEGKPHKHKISSSSTS------VSHSVIEDDDE------GEGEDQHLHLSSGSELDSGS 127 >gi|92881216|gb|ABE86107.1| Ubiquitin [Medicago truncatula] Length=762 Score = 29.3 bits (64), Expect = 7.6 Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 4/120 (3%) Frame = +1 Query 37 HSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQSNEKELVQHPESE 216 ++++ K K S E+K + +I + + + L + +KELV H S+ Sbjct 133 NTLKRKWNKVSAEHKTDLVNHRPSKKQKITPKLDDSMMNGLSNKVYAQIKKELVDHGPSK 192 Query 217 EQDKHLKFRVSHELDSASSEVN*KEKMQFLTLLLVKRRKIR---DSKMGDNMKCLFLSLV 387 +Q LK S ++ ++V+ + KM + K++KI D M D + F + V Sbjct 193 KQKNTLKLDGS-MMNGLRNKVSAEHKMDLVNHRPSKKQKITPKLDQSMFDGLSNNFSAQV 251 >gi|62751091|dbj|BAD95793.1| UniGene infoGene info hypothetical protein [Solanum lycopersicum] Length=278 Score = 29.3 bits (64), Expect = 7.6 Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 7/69 (10%) Frame = +1 Query 58 RKHSKEYKLKAS----DENNKHSHEIGSQESSDVSSELVGQTVQSNEKELVQHPESEEQD 225 R++ E KLK DEN + HE S + G+ NE E H ES D Sbjct 164 RENFGEMKLKDQLPHHDENEDNDHEQRQISISSENQGNFGEIKSKNENEFHAHDES---D 220 Query 226 KHLKFRVSH 252 K K V H Sbjct 221 KRSKLYVKH 229 >gi|18399981|ref|NP_566455.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|15010792|gb|AAK74055.1| UniGene infoGene info AT3g13360/MDC11_15 [Arabidopsis thaliana] gi|23506211|gb|AAN31117.1| UniGene infoGene info At3g13360/MDC11_15 [Arabidopsis thaliana] Length=459 Score = 29.3 bits (64), Expect = 7.6 Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 12/128 (9%) Frame = +1 Query 91 SDENNKHSHE----IGSQESSDVSSELVGQTVQS----NEKELVQHPESEE----QDKHL 234 S +NN H + S S V E++ + VQS ++ ++ H ++E Q H Sbjct 260 SKKNNNHWADKDALADSIRSFAVLQEVLWKEVQSFQELGKESVLLHSNTDELSSDQPSHQ 319 Query 235 KFRVSHELDSASSEVN*KEKMQFLTLLLVKRRKIRDSKMGDNMKCLFLSLVGECICIWDL 414 + + S S + KEK++ L L + R ++K + + E CI+ Sbjct 320 NCKEDNSTSSGSKALILKEKVKLLEHKLEEARAALEAKEARIQELENSKIESELECIFQR 379 Query 415 EIDTIFDH 438 +I+T +H Sbjct 380 KIETEIEH 387 >gi|55741065|gb|AAV64207.1| putative paramyosin [Zea mays] gi|55741107|gb|AAV64245.1| putative paramyosin [Zea mays] Length=784 Score = 29.3 bits (64), Expect = 7.6 Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 18/117 (15%) Frame = +1 Query 4 KDSQETSQVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQSN 183 +++ + Q + + ETK + + E +K +HE Q S V +E + Q V + Sbjct 596 REALQALQESEQARETKDSQRGVVLPISEYYELSKRAHEAEEQASEKV-AEALAQVVSAK 654 Query 184 EKELVQHPESEEQDKHLKFRVSHELDSASSEVN*KEKMQFLTLLLVKRRKIRDSKMG 354 E E + +E S E+D EK + L + L + + + K+G Sbjct 655 ESEAMSLESLKE--------ASDEMD---------EKKEALEIALERAGRANEGKLG 694 >gi|1905934|gb|AAB50181.1| UniGene info MADS box protein Length=228 Score = 29.3 bits (64), Expect = 7.6 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 13/74 (17%) Frame = +1 Query 79 KLKASDENNKHSHEIGSQESSDVSSELVGQTVQS-NEKELVQHPESEEQD-KHLKFRVSH 252 KLKA E + H+ L+G+ ++S N KEL Q + E KH++ R SH Sbjct 93 KLKAKIETIQKCHK-----------HLMGEDLESLNPKELQQLEQQLESSLKHIRSRKSH 141 Query 253 ELDSASSEVN*KEK 294 + + SE+ KE+ Sbjct 142 LMAESISELQKKER 155 >gi|27804371|gb|AAO22987.1| MADS-box transcription factor CDM104 [Chrysanthemum x morifolium] Length=250 Score = 29.3 bits (64), Expect = 7.6 Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 21/104 (20%) Frame = +1 Query 25 QVDDHSMETKSRKHSKEYKLKASDENNKHS--HEIGS-------QESSDVSSELVGQTVQ 177 Q +++ ET+S + + KLKA E+ + + H +G +E ++ +L G Q Sbjct 77 QDNNNERETQSW-YQEVSKLKAKFESLQRTQRHLLGEDLGPLSVKELHNLEKQLEGALTQ 135 Query 178 SNEKE---LVQHPES--------EEQDKHLKFRVSHELDSASSE 276 + +++ LV+ E + +KHLK +VSHEL + +E Sbjct 136 ARQRKTQILVEQMEELRCKERELGDMNKHLKIKVSHELSTFETE 179 >gi|28381535|gb|AAF12699.2| PTM1 [Populus tremuloides] Length=248 Score = 29.3 bits (64), Expect = 7.6 Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 3/66 (4%) Frame = +1 Query 160 VGQTVQSNEKELVQHPESEEQD--KHLKFRVSHELDSASSEVN*KEK-MQFLTLLLVKRR 330 VG+ + S + +Q+ E + + KH++ R +H + + SE+ KEK +Q +LVK+ Sbjct 113 VGEDLDSMSLKELQNLEQQIETALKHIRARKNHLMSQSISEMQRKEKAIQVQNNMLVKQI 172 Query 331 KIRDSK 348 K ++ K Sbjct 173 KEKEKK 178 >gi|87162938|gb|ABD28733.1| conserved hypothetical protein [Medicago truncatula] gi|92895917|gb|ABE92925.1| hypothetical protein MtrDRAFT_AC122167g19v2 [Medicago truncatula] Length=135 Score = 29.3 bits (64), Expect = 7.6 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 0/60 (0%) Frame = +1 Query 121 IGSQESSDVSSELVGQTVQSNEKELVQHPESEEQDKHLKFRVSHELDSASSEVN*KEKMQ 300 +GS S D ++++ + S EK+ + S++ K ++F S + SEV KEK + Sbjct 37 LGSHVSHDPHTQILRSCLYSEEKKRERKMNSKKNKKKVRFEESVKESREKSEVAKKEKQR 96 >gi|42572369|ref|NP_974280.1| UniGene infoGene info DNA binding / protein binding / zinc ion binding [Arabidopsis thaliana] Length=233 Score = 29.3 bits (64), Expect = 7.6 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Frame = +1 Query 97 ENNKHSHEIGSQESSDVSSELVGQTVQSNEKELVQ-HPESEEQDKH 231 ++NK S + GS+ + + GQT S K + + + E EE+D+H Sbjct 130 KDNKPSSDSGSKSRNGTKRSIDGQTKSSTPKLMEESYEEEEEEDEH 175 >gi|15229696|ref|NP_187729.1| UniGene infoGene info DNA binding / protein binding / zinc ion binding [Arabidopsis thaliana] gi|6016679|gb|AAF01506.1|AC009991_2 Gene info putative nucleic acid binding protein [Arabidopsis thaliana] gi|12321890|gb|AAG50986.1|AC073395_28 Gene info PHD-finger protein, putative; 47584-45553 [Arabidopsis thaliana] gi|16604430|gb|AAL24221.1| UniGene infoGene info At3g11200/F11B9.12 [Arabidopsis thaliana] gi|21537350|gb|AAM61691.1| UniGene infoGene info putative nucleic acid binding protein [Arabidopsis thaliana] gi|23505823|gb|AAN28771.1| UniGene infoGene info At3g11200/F11B9.12 [Arabidopsis thaliana] Length=246 Score = 29.3 bits (64), Expect = 7.6 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Frame = +1 Query 97 ENNKHSHEIGSQESSDVSSELVGQTVQSNEKELVQ-HPESEEQDKH 231 ++NK S + GS+ + + GQT S K + + + E EE+D+H Sbjct 143 KDNKPSSDSGSKSRNGTKRSIDGQTKSSTPKLMEESYEEEEEEDEH 188 >gi|50470538|emb|CAH04879.1| MADS domain protein [Gerbera hybrid cultivar] Length=247 Score = 29.3 bits (64), Expect = 7.6 Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 21/104 (20%) Frame = +1 Query 25 QVDDHSMETKSRKHSKEYKLKASDENNKHS--HEIGS-------QESSDVSSELVGQTVQ 177 Q +++ ET+S + + KLKA E+ + + H +G +E ++ +L G Q Sbjct 77 QDNNNERETQSW-YQEVSKLKAKFESLQRTQRHLLGEDLGPLSVKELHNLEKQLEGALTQ 135 Query 178 SNEK---------ELVQHPESE--EQDKHLKFRVSHELDSASSE 276 + ++ E ++ E E + +KHLK +VSHEL + +E Sbjct 136 ARQRKTQIMVEQMEELRRKERELGDMNKHLKIKVSHELSTFDAE 179 >gi|9294542|dbj|BAB02805.1| unnamed protein product [Arabidopsis thaliana] Length=538 Score = 29.3 bits (64), Expect = 7.6 Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 12/128 (9%) Frame = +1 Query 91 SDENNKHSHE----IGSQESSDVSSELVGQTVQS----NEKELVQHPESEE----QDKHL 234 S +NN H + S S V E++ + VQS ++ ++ H ++E Q H Sbjct 339 SKKNNNHWADKDALADSIRSFAVLQEVLWKEVQSFQELGKESVLLHSNTDELSSDQPSHQ 398 Query 235 KFRVSHELDSASSEVN*KEKMQFLTLLLVKRRKIRDSKMGDNMKCLFLSLVGECICIWDL 414 + + S S + KEK++ L L + R ++K + + E CI+ Sbjct 399 NCKEDNSTSSGSKALILKEKVKLLEHKLEEARAALEAKEARIQELENSKIESELECIFQR 458 Query 415 EIDTIFDH 438 +I+T +H Sbjct 459 KIETEIEH 466 >gi|37905913|gb|AAO38853.1| dehydrin-like protein [Capsicum annuum] Length=219 Score = 28.9 bits (63), Expect = 10.0 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%) Frame = +1 Query 7 DSQETSQVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQSNE 186 + Q S ++ +H +E K K +E H S SSD E+VG+ Q + Sbjct 45 EEQAISSEFGEKVKVGEEEHKEEEKKK--EEKKLHRSSSSSSSSSDEEEEVVGEDGQKIK 102 Query 187 KELVQHPESEEQDK 228 K+ + + + +DK Sbjct 103 KKKKKGLKDKMKDK 116 >gi|18401896|ref|NP_565678.1| UniGene infoGene info CXIP4 (CAX INTERACTING PROTEIN 4); nucleic acid binding [Arabidopsis thaliana] gi|122063426|sp|Q84Y18|CXIP4_ARATH CAX-interacting protein 4 gi|16226661|gb|AAL16226.1|AF428457_1 UniGene infoGene info At2g28910/F8N16.20 [Arabidopsis thaliana] gi|3927838|gb|AAC79595.1| Gene info expressed protein [Arabidopsis thaliana] gi|22655466|gb|AAM98325.1| UniGene infoGene info At2g28910/F8N16.20 [Arabidopsis thaliana] Length=332 Score = 28.9 bits (63), Expect = 10.0 Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 10/85 (11%) Frame = +1 Query 7 DSQETSQVDDHSMETKSRK----------HSKEYKLKASDENNKHSHEIGSQESSDVSSE 156 DS E+ DD ++ KSRK HS + ++S+++ + SSD + Sbjct 242 DSDESEDEDDRRVKRKSRKEKRRRRSRRNHSDDSDSESSEDDRRQKRRNKVAASSDSEAN 301 Query 157 LVGQTVQSNEKELVQHPESEEQDKH 231 + G V + + E + + +H Sbjct 302 VSGDDVSRVGRGSSKRSEKKSRKRH 326 >gi|3152582|gb|AAC17063.1| YUP8H12R.20 [Arabidopsis thaliana] Length=1325 Score = 28.9 bits (63), Expect = 10.0 Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 13/98 (13%) Frame = +1 Query 1 VKDSQETSQVDDHSMETKSRKHSKEYKLKASDENNKHSHEIGSQESSDVSSELVGQTVQS 180 ++D +S ++ + +TKS+KH + + + S SQ SD +E+ Q + + Sbjct 287 LEDEANSSALEISNGDTKSQKHESAHSIL----DELRSLTTKSQGQSDELTEITNQEIVN 342 Query 181 NEKELVQHPESE----EQDKHLKFRVSHELDSASSEVN 282 + PE +D L R LDS +S VN Sbjct 343 -----INVPEKSNLNLSRDSFLVERTKKWLDSTTSHVN 375 >gi|27651999|gb|AAO17572.1| UniGene info CAX-interacting protein 4 [Arabidopsis thaliana] Length=332 Score = 28.9 bits (63), Expect = 10.0 Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 10/85 (11%) Frame = +1 Query 7 DSQETSQVDDHSMETKSRK----------HSKEYKLKASDENNKHSHEIGSQESSDVSSE 156 DS E+ DD ++ KSRK HS + ++S+++ + SSD + Sbjct 242 DSDESEDEDDRRVKRKSRKEKRRRRSRRNHSDDSDSESSEDDRRQKRRNKVAASSDSEAN 301 Query 157 LVGQTVQSNEKELVQHPESEEQDKH 231 + G V + + E + + +H Sbjct 302 VSGDDVSRVGRGSSKRSEKKSRKRH 326 >gi|3395938|gb|AAC62015.1| UniGene info polypyrimidine tract-binding protein homolog [Arabidopsis thaliana] Length=418 Score = 28.9 bits (63), Expect = 10.0 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%) Frame = -3 Query 127 YQSHGNAY-CSHHL-PSAYTLWSACDSWFPYC 38 Y +G ++ C+HHL P+ +TL S W YC Sbjct 371 YSGYGGSHICTHHLIPTGFTLRSTSLLWMRYC 402
  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 314
Number of extensions: 4
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 501
Length of database: 101054579
Length adjustment: 105
Effective length of query: 396
Effective length of database: 71302934
Effective search space: 4420781908
Effective search space used: 4420781908
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 63 (28.9 bits)