Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168943543-31466-131166178197.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig263 Length=384
Score E Sequences producing significant alignments: (Bits) Value gi|115486733|ref|NP_001068510.1| Os11g0696200 [Oryza sativa (... 181 9e-46 gi|108864676|gb|ABA95549.2| ATP-citrate synthase, putative, e... 181 9e-46 gi|115486715|ref|NP_001068501.1| Os11g0693800 [Oryza sativa (... 177 8e-45 gi|62734470|gb|AAX96579.1| hypothetical protein [Oryza sativa (j 177 8e-45 gi|62732887|gb|AAX95006.1| hypothetical protein LOC_Os11g4712... 177 8e-45 gi|115489130|ref|NP_001067052.1| Os12g0566300 [Oryza sativa (... 177 1e-44 gi|15217510|ref|NP_172414.1| ACLA-3 [Arabidopsis thaliana] >g... 174 6e-44 gi|21593129|gb|AAM65078.1| ATP citrate-lyase, putative [Arabidop 162 3e-40 gi|15220186|ref|NP_172537.1| ACLA-1 [Arabidopsis thaliana] >g... 162 3e-40 gi|15919089|emb|CAC86996.1| ATP citrate lyase b-subunit [Lupinus 162 4e-40 gi|15219818|ref|NP_176280.1| ACLA-2 [Arabidopsis thaliana] >g... 157 1e-38 gi|19698853|gb|AAL91162.1| similar to ATP-citrate-lyase [Arab... 157 1e-38 gi|12323802|gb|AAG51870.1|AC079675_5 ATP citrate-lyase, putat... 62.4 5e-10 gi|15450878|gb|AAK96710.1| Unknown protein [Arabidopsis thali... 30.8 1.5 gi|18390760|ref|NP_563788.1| RNA binding / nucleic acid bindi... 30.8 1.5 gi|92875061|gb|ABE83217.1| Protein of unknown function DUF231, p 30.0 2.6 gi|116831459|gb|ABK28682.1| unknown [Arabidopsis thaliana] 28.1 9.7 gi|92875065|gb|ABE83221.1| Peptidase M14, carboxypeptidase A [Me 28.1 9.7 gi|15240684|ref|NP_196323.1| RNA binding / nucleic acid bindi... 28.1 9.7
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 301 Number of extensions: 8 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 384 Length of database: 101054579 Length adjustment: 94 Effective length of query: 290 Effective length of database: 74419773 Effective search space: 2530272282 Effective search space used: 2530272282 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)