RID=1168944080-27884-77499736293.BLASTQ4, Contig281

Alignments
 

>gi|92898663|gb|ABE94283.1|  SWAP/Surp; Ubiquitin [Medicago truncatula]
Length=804

 Score =  190 bits (483),  Expect = 2e-48
 Identities = 93/110 (84%), Positives = 104/110 (94%), Gaps = 0/110 (0%)
 Frame = +1

Query  94   KRQKLDDSMLVPEDQFLGQHPGPARITVSVPNLDEGNLKGQLLEITVQALSETVGSLKEK  273
            KRQK DDS L+PED+FL QHPGPARI++SVPN+DEGNLKGQ+LEITVQ+LSETVGSLKEK
Sbjct  695  KRQKHDDSALIPEDKFLAQHPGPARISISVPNVDEGNLKGQVLEITVQSLSETVGSLKEK  754

Query  274  IAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGETLALSLRERGGRKR  423
            IAGEIQLPANKQKLSGK GFLKDNM+LA+YNV  GETL+L+LRERGGRKR
Sbjct  755  IAGEIQLPANKQKLSGKPGFLKDNMSLAHYNVSGGETLSLALRERGGRKR  804


>gi|7527720|gb|AAF63169.1|AC010657_5  T5E21.13 [Arabidopsis thaliana]
Length=1776

 Score =  169 bits (427),  Expect = 7e-42
 Identities = 87/110 (79%), Positives = 95/110 (86%), Gaps = 4/110 (3%)
 Frame = +1

Query  94    KRQKLDDSMLVPEDQFLGQHPGPARITVSVPNLDEGNLKGQLLEITVQALSETVGSLKEK  273
             KRQK D+S LVPEDQFL QHPGPA I VS PN ++G    Q +EITVQ+LSE VGSLKEK
Sbjct  1671  KRQKFDESALVPEDQFLAQHPGPATIRVSKPNENDG----QFMEITVQSLSENVGSLKEK  1726

Query  274   IAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGETLALSLRERGGRKR  423
             IAGEIQ+PANKQKLSGKAGFLKDNM+LA+YNVGAGE L LSLRERGGRKR
Sbjct  1727  IAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGGRKR  1776


 Score =  105 bits (262),  Expect = 1e-22
 Identities = 54/73 (73%), Positives = 62/73 (84%), Gaps = 4/73 (5%)
 Frame = +1

Query  94   KRQKLDDSMLVPEDQFLGQHPGPARITVSVPNLDEGNLKGQLLEITVQALSETVGSLKEK  273
            KRQKLD+S LVPEDQFL QHPGPA I VS PN ++G    Q++EITVQ+LSE VGSLKEK
Sbjct  814  KRQKLDESALVPEDQFLAQHPGPATIRVSKPNENDG----QVMEITVQSLSENVGSLKEK  869

Query  274  IAGEIQLPANKQK  312
            IAGE+Q+PANKQK
Sbjct  870  IAGEMQIPANKQK  882


>gi|15223846|ref|NP_172917.1|  RNA binding [Arabidopsis thaliana]
 gi|110740977|dbj|BAE98583.1|  putative splicing factor [Arabidopsis thaliana]
Length=785

 Score =  169 bits (427),  Expect = 7e-42
 Identities = 87/110 (79%), Positives = 95/110 (86%), Gaps = 4/110 (3%)
 Frame = +1

Query  94   KRQKLDDSMLVPEDQFLGQHPGPARITVSVPNLDEGNLKGQLLEITVQALSETVGSLKEK  273
            KRQK D+S LVPEDQFL QHPGPA I VS PN ++G    Q +EITVQ+LSE VGSLKEK
Sbjct  680  KRQKFDESALVPEDQFLAQHPGPATIRVSKPNENDG----QFMEITVQSLSENVGSLKEK  735

Query  274  IAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGETLALSLRERGGRKR  423
            IAGEIQ+PANKQKLSGKAGFLKDNM+LA+YNVGAGE L LSLRERGGRKR
Sbjct  736  IAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGGRKR  785


>gi|73919314|sp|Q8RXF1|SF3A1_ARATH  Probable splicing factor 3 subunit 1
 gi|19698893|gb|AAL91182.1|  splicing factor, putative [Arabidopsis thaliana]
Length=785

 Score =  169 bits (427),  Expect = 7e-42
 Identities = 87/110 (79%), Positives = 95/110 (86%), Gaps = 4/110 (3%)
 Frame = +1

Query  94   KRQKLDDSMLVPEDQFLGQHPGPARITVSVPNLDEGNLKGQLLEITVQALSETVGSLKEK  273
            KRQK D+S LVPEDQFL QHPGPA I VS PN ++G    Q +EITVQ+LSE VGSLKEK
Sbjct  680  KRQKFDESALVPEDQFLAQHPGPATIRVSKPNENDG----QFMEITVQSLSENVGSLKEK  735

Query  274  IAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGETLALSLRERGGRKR  423
            IAGEIQ+PANKQKLSGKAGFLKDNM+LA+YNVGAGE L LSLRERGGRKR
Sbjct  736  IAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGGRKR  785


>gi|115445277|ref|NP_001046418.1|  Os02g0245000 [Oryza sativa (japonica cultivar-group)]
 gi|50251803|dbj|BAD27734.1|  putative splicing factor 3a [Oryza sativa (japonica cultivar-group)]
 gi|113535949|dbj|BAF08332.1|  Os02g0245000 [Oryza sativa (japonica cultivar-group)]
Length=792

 Score =  166 bits (419),  Expect = 6e-41
 Identities = 79/110 (71%), Positives = 96/110 (87%), Gaps = 0/110 (0%)
 Frame = +1

Query  94   KRQKLDDSMLVPEDQFLGQHPGPARITVSVPNLDEGNLKGQLLEITVQALSETVGSLKEK  273
            KR + DD+ L+P +QFL QHPGPA I+VSVPNLDEGNL+GQ+LEI VQ+LS+TVGSLKE+
Sbjct  683  KRLRTDDASLIPAEQFLAQHPGPAHISVSVPNLDEGNLRGQVLEIGVQSLSDTVGSLKEQ  742

Query  274  IAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGETLALSLRERGGRKR  423
            IAGE+QLPANKQKLS +  FLKDN+TLAYYN+G G  + L+LRERGGRK+
Sbjct  743  IAGELQLPANKQKLSVRTSFLKDNLTLAYYNIGPGVVINLTLRERGGRKK  792


>gi|56966773|pdb|1WE6|A  Chain A, Solution Structure Of Ubiquitin-Like Domain In Splicing 
Factor Aal91182
Length=111

 Score =  155 bits (391),  Expect = 1e-37
 Identities = 80/104 (76%), Positives = 88/104 (84%), Gaps = 4/104 (3%)
 Frame = +1

Query  103  KLDDSMLVPEDQFLGQHPGPARITVSVPNLDEGNLKGQLLEITVQALSETVGSLKEKIAG  282
            K D+S LVPEDQFL QHPGPA I VS PN ++G    Q +EITVQ+LSE VGSLKEKIAG
Sbjct  8    KFDESALVPEDQFLAQHPGPATIRVSKPNENDG----QFMEITVQSLSENVGSLKEKIAG  63

Query  283  EIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGETLALSLRERGG  414
            EIQ+PANKQKLSGKAGFLKDNM+LA+YNVGAGE L LSLRER G
Sbjct  64   EIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERSG  107


>gi|18416828|ref|NP_568261.1|  RNA binding [Arabidopsis thaliana]
 gi|14586358|emb|CAC42889.1|  putative protein [Arabidopsis thaliana]
Length=419

 Score =  126 bits (317),  Expect = 4e-29
 Identities = 65/98 (66%), Positives = 79/98 (80%), Gaps = 4/98 (4%)
 Frame = +1

Query  103  KLDDSMLVPEDQFLGQHPGPARITVSVPNLDEGNLKGQLLEITVQALSETVGSLKEKIAG  282
            + D+S+LVPEDQFL QHPG + I VSVP+ D+     ++++ITVQ+LSE V SLKEKI+G
Sbjct  324  EFDESVLVPEDQFLAQHPGSSTIMVSVPDPDDW----KVVKITVQSLSENVASLKEKISG  379

Query  283  EIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGETLALS  396
            EIQ P NKQKL GKAGFLKDN +LA+YNVGAGE L LS
Sbjct  380  EIQFPTNKQKLRGKAGFLKDNTSLAHYNVGAGEILTLS  417


>gi|15223844|ref|NP_172916.1|  RNA binding [Arabidopsis thaliana]
Length=735

 Score =  105 bits (262),  Expect = 1e-22
 Identities = 54/73 (73%), Positives = 62/73 (84%), Gaps = 4/73 (5%)
 Frame = +1

Query  94   KRQKLDDSMLVPEDQFLGQHPGPARITVSVPNLDEGNLKGQLLEITVQALSETVGSLKEK  273
            KRQKLD+S LVPEDQFL QHPGPA I VS PN ++G    Q++EITVQ+LSE VGSLKEK
Sbjct  667  KRQKLDESALVPEDQFLAQHPGPATIRVSKPNENDG----QVMEITVQSLSENVGSLKEK  722

Query  274  IAGEIQLPANKQK  312
            IAGE+Q+PANKQK
Sbjct  723  IAGEMQIPANKQK  735


>gi|2244914|emb|CAB10336.1|  splicing factor like protein [Arabidopsis thaliana]
 gi|7268306|emb|CAB78600.1|  splicing factor like protein [Arabidopsis thaliana]
Length=559

 Score = 87.0 bits (214),  Expect = 4e-17
 Identities = 56/107 (52%), Positives = 70/107 (65%), Gaps = 11/107 (10%)
 Frame = +1

Query  94   KRQKLDDSMLVP---EDQFLGQHPGPARITV-SVPNLDEGNLKGQLLEITVQALSETVGS  261
            KR +LD+S LVP   EDQFL QH G +   V  VP+       G++++ITVQ+LSE V S
Sbjct  458  KRPELDESALVPLEPEDQFLAQHEGLSIFRVICVPD------GGEVIKITVQSLSENVAS  511

Query  262  LKEKIAGEIQLPANKQKLSGKAGFLKD-NMTLAYYNVGAGETLALSL  399
            LKEKIA  +Q+ ANKQ L G    LKD N +LAYYNV AG+ L L +
Sbjct  512  LKEKIAEVVQIQANKQTLRGLRAVLKDNNRSLAYYNVKAGDILILDV  558


>gi|15240184|ref|NP_196306.1|  unknown protein [Arabidopsis thaliana]
 gi|9759544|dbj|BAB11146.1|  unnamed protein product [Arabidopsis thaliana]
Length=66

 Score = 68.6 bits (166),  Expect = 1e-11
 Identities = 42/75 (56%), Positives = 54/75 (72%), Gaps = 12/75 (16%)
 Frame = +1

Query  175  VSVPNLDEGNLKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLK-DNMT  351
            VSVP++++G    Q++EITVQ+LSE V SLKEK+       ANK KL GKAG LK D+ +
Sbjct  2    VSVPDVNDG----QVIEITVQSLSENVASLKEKV-------ANKLKLRGKAGILKDDDKS  50

Query  352  LAYYNVGAGETLALS  396
            LA+YNV AG+ L LS
Sbjct  51   LAHYNVRAGDILTLS  65


>gi|28395459|gb|AAO38879.1|  ubiquitin/ribosomal fusion protein [Malus x domestica]
Length=156

 Score = 46.6 bits (109),  Expect = 5e-05
 Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+++ ++K KI  +  +P ++Q+L      L+DN TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|115462241|ref|NP_001054720.1|  Os05g0160200 [Oryza sativa (japonica cultivar-group)]
 gi|113578271|dbj|BAF16634.1|  Os05g0160200 [Oryza sativa (japonica cultivar-group)]
Length=177

 Score = 46.2 bits (108),  Expect = 7e-05
 Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
 Frame = +1

Query  145  GQHPGPARITVSVPNLDEGNLKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGK  324
            G  P PA   + +       L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L   
Sbjct  13   GGDPSPAAAKMQI---FVKTLTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFA  68

Query  325  AGFLKDNMTLAYYNVGAGETLALSLRERGGRKR  423
               L+D  TLA YN+    TL L LR RGG K+
Sbjct  69   GKQLEDGRTLADYNIQKESTLHLVLRLRGGAKK  101


>gi|433970|emb|CAA82268.1|  polyubiquitin [Acetabularia peniculus]
Length=423

 Score = 46.2 bits (108),  Expect = 7e-05
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + VQ+ S+TV ++K KI  +  +P ++Q+L      L+D +TLA YN+    T
Sbjct  49   LTGKTITLEVQS-SDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLTLADYNIQKEST  107

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  108  LHLVLRLRGG  117


 Score = 43.9 bits (102),  Expect = 4e-04
 Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+TV ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  125  LTGKTITLEVES-SDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  183

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  184  LHLVLRLRGG  193


 Score = 43.9 bits (102),  Expect = 4e-04
 Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+TV ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  201  LTGKTITLEVES-SDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  259

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  260  LHLVLRLRGG  269


 Score = 43.9 bits (102),  Expect = 4e-04
 Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+TV ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  277  LTGKTITLEVES-SDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  335

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  336  LHLVLRLRGG  345


 Score = 43.1 bits (100),  Expect = 6e-04
 Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+TV ++K KI  +  +P ++Q++      L+D  TLA YN+    T
Sbjct  353  LTGKTITLEVES-SDTVENVKSKIQDKEGIPPDQQRIIFAGKQLEDGRTLADYNIQKEST  411

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  412  LHLVLRLRGG  421


 Score = 32.7 bits (73),  Expect = 0.81
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 0/41 (0%)
 Frame = +1

Query  292  LPANKQKLSGKAGFLKDNMTLAYYNVGAGETLALSLRERGG  414
            +P ++Q+L      L+D  TLA YN+    TL L LR RGG
Sbjct  1    IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG  41


>gi|117607067|gb|ABK42077.1|  ubiquitin extension protein [Capsicum annuum]
Length=179

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  31   LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  89

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  90   LHLVLRLRGGAKK  102


>gi|115187659|gb|ABI84265.1|  ubiquitin/ribosomal protein S27a [Arachis hypogaea]
Length=155

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|111227974|gb|ABH08969.1|  ubiquitin extension protein [Morus bombycis]
Length=156

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|92870550|gb|ABE79841.1|  Ubiquitin; Ribosomal protein S27a [Medicago truncatula]
 gi|92895634|gb|ABE92781.1|  Ubiquitin; Ribosomal protein S27a [Medicago truncatula]
Length=232

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  85   LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  143

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  144  LHLVLRLRGGAKK  156


>gi|51038109|gb|AAT93912.1|  putative ubiquitin extension protein [Oryza sativa (japonica 
cultivar-group)]
 gi|55168056|gb|AAV43924.1|  putative ubiquitin fusion protein [Oryza sativa (japonica cultivar-group)]
Length=155

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|34581769|gb|AAQ76040.1|  ubiquitin extension protein [Cucumis sativus]
Length=156

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|18252349|gb|AAL66206.1|AF386524_1  ubiquitin extension protein [Pyrus communis]
Length=154

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|1771780|emb|CAA71132.1|  ubiquitin extension protein [Solanum tuberosum]
 gi|76573361|gb|ABA46785.1|  ubiquitin extension protein-like protein [Solanum tuberosum]
Length=156

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|73761683|gb|AAZ83341.1|  ubiquitin extension protein [Gossypium hirsutum]
Length=156

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|167073|gb|AAA62698.1|  ubiquitin
Length=155

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|10180023|gb|AAG13985.1|AF298826_1  ubiquitin/ribosomal protein 27a [Prunus avium]
Length=156

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|167075|gb|AAA62699.1|  ubiquitin
Length=155

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|71913239|gb|AAZ53360.1|  ubiquitin extension protein [Nicotiana tabacum]
Length=156

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|18407264|ref|NP_566095.1|  UBQ6; protein binding [Arabidopsis thaliana]
 gi|14030651|gb|AAK53000.1|AF375416_1  At2g47110/F14M4.6 [Arabidopsis thaliana]
 gi|166936|gb|AAA32907.1|  ubiquitin extension protein (UBQ6)
 gi|3522953|gb|AAC34235.1|  ubiquitin extension protein (UBQ6) [Arabidopsis thaliana]
 gi|21593980|gb|AAM65909.1|  ubiquitin extension protein (UBQ6) [Arabidopsis thaliana]
 gi|22655410|gb|AAM98297.1|  At2g47110/F14M4.6 [Arabidopsis thaliana]
 gi|23505779|gb|AAN28749.1|  At2g47110/F14M4.6 [Arabidopsis thaliana]
Length=157

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|1076678|pir||S42643  ubiquitin / ribosomal protein S27a - potato (fragment)
Length=126

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  53   LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  111

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  112  LHLVLRLRGGAKK  124


>gi|15228715|ref|NP_191784.1|  protein binding / structural constituent of ribosome [Arabidopsis 
thaliana]
 gi|166934|gb|AAA32906.1|  ubiquitin extension protein (UBQ5)
 gi|6899935|emb|CAB71885.1|  ubiquitin extension protein (UBQ5) [Arabidopsis thaliana]
 gi|15529190|gb|AAK97689.1|  AT3g62250/T17J13_210 [Arabidopsis thaliana]
 gi|21537196|gb|AAM61537.1|  ubiquitin extension protein UBQ5 [Arabidopsis thaliana]
 gi|22655050|gb|AAM98116.1|  At3g62250/T17J13_210 [Arabidopsis thaliana]
 gi|110742096|dbj|BAE98979.1|  ubiquitin extension protein [Arabidopsis thaliana]
Length=157

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|2894306|emb|CAA11268.1|  ubiquitin extension protein [Nicotiana tabacum]
 gi|59800131|gb|AAX07419.1|  ubiquitin/s27a 40S ribosomal protein [Nicotiana benthamiana]
Length=156

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|282979|pir||S25305  ubiquitin / ribosomal protein S27a - potato
 gi|19397|emb|CAA41207.1|  ubiquitin [Solanum lycopersicum]
 gi|21601|emb|CAA77735.1|  ubiquitin monomer/ribosomal protein [Solanum tuberosum]
 gi|349055|gb|AAA19247.1|  ubiquitin/ribosomal fusion protein
Length=156

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|15220742|ref|NP_173755.1|  protein binding / structural constituent of ribosome [Arabidopsis 
thaliana]
 gi|25294254|pir||H86367  protein F28C11.5 [imported] - Arabidopsis thaliana
 gi|8778573|gb|AAF79581.1|AC007945_1  F28C11.5 [Arabidopsis thaliana]
 gi|9295695|gb|AAF87001.1|AC005292_10  F26F24.28 [Arabidopsis thaliana]
 gi|21553524|gb|AAM62617.1|  ubiquitin extension protein, putative [Arabidopsis thaliana]
 gi|89001023|gb|ABD59101.1|  At1g23410 [Arabidopsis thaliana]
Length=156

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|902525|gb|AAA70104.1|  ubiquitin fusion protein
 gi|1589387|prf||2211240A  ubiquitin fusion protein
Length=155

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|115436314|ref|NP_001042915.1|  Os01g0328400 [Oryza sativa (japonica cultivar-group)]
 gi|13366017|dbj|BAB39294.1|  ubiquitin / ribosomal protein S27a.1 [Oryza sativa (japonica 
cultivar-group)]
 gi|113532446|dbj|BAF04829.1|  Os01g0328400 [Oryza sativa (japonica cultivar-group)]
Length=155

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|82733|pir||JS0657  ubiquitin / ribosomal protein S27a - maize
 gi|168651|gb|AAA33519.1|  ubiquitin fusion protein
 gi|902527|gb|AAA70105.1|  ubiquitin fusion protein
 gi|1589388|prf||2211240B  ubiquitin fusion protein
Length=155

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|541954|pir||S40240  ubiquitin/ribosomal protein S27a fusion protein - white lupine
 gi|438111|emb|CAA80334.1|  ubiquitin extension protein [Lupinus albus]
Length=155

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|541953|pir||S40239  ubiquitin/ribosomal protein S27a fusion protein - white lupine
 gi|438109|emb|CAA80333.1|  ubiquitin extension protein [Lupinus albus]
Length=155

 Score = 45.8 bits (107),  Expect = 9e-05
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGAKK  79


>gi|3319208|gb|AAC26159.1|  ubiquitin-carboxyl extension [Daucus carota]
Length=143

 Score = 45.4 bits (106),  Expect = 1e-04
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L LR RGG K+
Sbjct  67   LHLVLRLRGGGKK  79


>gi|28436485|gb|AAO43309.1|  putative polyubiquitin [Arabidopsis thaliana]
Length=250

 Score = 44.7 bits (104),  Expect = 2e-04
 Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + VQ+ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  28   LTGKTITLEVQS-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  86

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  87   LHLVLRLRGG  96


 Score = 43.5 bits (101),  Expect = 5e-04
 Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  104  LTGKTITLEVES-SDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  162

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  163  LHLVLRLRGG  172


 Score = 42.7 bits (99),  Expect = 8e-04
 Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++++L      L+D  TLA YN+    T
Sbjct  180  LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQKRLIFAGKQLEDGRTLAVYNIQKEST  238

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  239  LHLVLRLRGG  248


>gi|28436487|gb|AAO43310.1|  putative polyubiquitin [Arabidopsis thaliana]
Length=250

 Score = 44.7 bits (104),  Expect = 2e-04
 Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+++ + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  104  LTGKIITLEVES-SDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  162

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  163  LHLVLRLRGG  172


 Score = 44.3 bits (103),  Expect = 3e-04
 Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  180  LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAVYNIQKEST  238

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  239  LHLVLRLRGG  248


 Score = 43.5 bits (101),  Expect = 5e-04
 Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  28   LTGKTITLEVKS-SDTIDNIKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  86

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  87   LHLVLRLRGG  96


>gi|18405196|ref|NP_564675.1|  UBQ12 (UBIQUITIN 12) [Arabidopsis thaliana]
Length=230

 Score = 44.7 bits (104),  Expect = 2e-04
 Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ +LK KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  84   LTGKTITLEVES-SDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  142

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  143  LHLVLRLRGG  152


 Score = 38.9 bits (89),  Expect = 0.011
 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+   + V++ S+T+ ++K KI     +P ++ +L      L+D  TLA YNV    T
Sbjct  8    LTGKTKVLEVES-SDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNVQEDST  66

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  67   LHLLLRFRGG  76


 Score = 37.7 bits (86),  Expect = 0.025
 Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +  ++Q+L       +D  TLA YN+    T
Sbjct  160  LTGKTITLEVES-SDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQKEST  218

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  219  LHLVLRLRGG  228


>gi|1044940|emb|CAA63150.1|  ORF [Zea mays]
Length=155

 Score = 44.7 bits (104),  Expect = 2e-04
 Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGGRKR  423
            L L +R RGG K+
Sbjct  67   LHLVVRLRGGAKK  79


>gi|102655942|gb|AAY33920.2|  polyubiquitin [Euphorbia characias]
Length=381

 Score = 44.3 bits (103),  Expect = 3e-04
 Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  84   LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKHLEDGRTLADYNIQKEST  142

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  143  LHLVLRLRGG  152


 Score = 43.5 bits (101),  Expect = 5e-04
 Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  236  LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  294

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  295  LHLVLRLRGG  304


 Score = 43.5 bits (101),  Expect = 5e-04
 Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  312  LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPSQQRLIFAGKQLEDGRTLADYNIQKEST  370

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  371  LHLVLRLRGG  380


 Score = 42.7 bits (99),  Expect = 8e-04
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K K   +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKFQDKEGIPPDQQRLIFAGKHLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  67   LHLVLRLRGG  76


 Score = 40.0 bits (92),  Expect = 0.005
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L    TLA YN+    T
Sbjct  160  LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDHGRTLADYNIQKEST  218

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  219  LHLVLRLRGG  228


>gi|755763|emb|CAA27751.1|  unnamed protein product [Hordeum vulgare subsp. vulgare]
Length=171

 Score = 44.3 bits (103),  Expect = 3e-04
 Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  102  LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  160

Query  385  LALSLRERGGR  417
            L L LR RGG+
Sbjct  161  LHLVLRLRGGK  171


 Score = 43.5 bits (101),  Expect = 5e-04
 Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  26   LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  84

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  85   LHLVLRLRGG  94


>gi|28436472|gb|AAO43303.1|  putative polyubiquitin [Arabidopsis thaliana]
Length=325

 Score = 44.3 bits (103),  Expect = 3e-04
 Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
 Frame = +1

Query  202  NLKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGE  381
            NL G+ + + V++ S T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    
Sbjct  254  NLTGKTITLEVES-SGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES  312

Query  382  TLALSLRERGG  414
            TL L LR RGG
Sbjct  313  TLHLVLRLRGG  323


 Score = 43.5 bits (101),  Expect = 5e-04
 Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  28   LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  86

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  87   LHLVLRLRGG  96


 Score = 43.5 bits (101),  Expect = 5e-04
 Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  179  LTGKTITLEVES-SDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  237

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  238  LHLVLRLRGG  247


>gi|28436483|gb|AAO43308.1|  putative polyubiquitin [Arabidopsis thaliana]
Length=250

 Score = 44.3 bits (103),  Expect = 3e-04
 Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  180  LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAVYNIQKEST  238

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  239  LHLVLRLRGG  248


 Score = 43.5 bits (101),  Expect = 5e-04
 Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  28   LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  86

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  87   LHLVLRLRGG  96


 Score = 43.5 bits (101),  Expect = 5e-04
 Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  104  LTGKTITLEVES-SDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  162

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  163  LHLVLRLRGG  172


>gi|2894308|emb|CAA11269.1|  polyubiquitin [Nicotiana tabacum]
Length=381

 Score = 44.3 bits (103),  Expect = 3e-04
 Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K+KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  67   LHLVLRLRGG  76


 Score = 44.3 bits (103),  Expect = 3e-04
 Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K+KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  84   LTGKTITLEVES-SDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  142

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  143  LHLVLRLRGG  152


 Score = 44.3 bits (103),  Expect = 3e-04
 Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K+KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  160  LTGKTITLEVES-SDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  218

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  219  LHLVLRLRGG  228


 Score = 44.3 bits (103),  Expect = 3e-04
 Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K+KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  236  LTGKTITLEVES-SDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  294

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  295  LHLVLRLRGG  304


 Score = 44.3 bits (103),  Expect = 3e-04
 Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K+KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  312  LTGKTITLEVES-SDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  370

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  371  LHLVLRLRGG  380


>gi|3789942|gb|AAC67552.1|  polyubiquitin [Saccharum hybrid cultivar H32-8560]
Length=381

 Score = 44.3 bits (103),  Expect = 3e-04
 Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  160  LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAXYNIQKEST  218

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  219  LHLVLRLRGG  228


 Score = 43.9 bits (102),  Expect = 4e-04
 Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  312  LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  370

Query  385  LALSLRERGGR  417
            L L LR RGG+
Sbjct  371  LHLVLRLRGGQ  381


 Score = 43.5 bits (101),  Expect = 5e-04
 Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  8    LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  66

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  67   LHLVLRLRGG  76


 Score = 42.4 bits (98),  Expect = 0.001
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+       L+D  TLA YN+    T
Sbjct  236  LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRXIFAGKQLEDGRTLAXYNIQKEST  294

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  295  LHLVLRLRGG  304


 Score = 41.6 bits (96),  Expect = 0.002
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+       L+D  TLA YN+    T
Sbjct  84   LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRXIFAGKQLEDGRTLADYNIQKEST  142

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  143  LHLVLRLRGG  152


>gi|92867196|gb|ABE77547.1|  Ubiquitin; Seven in absentia protein [Medicago truncatula]
Length=316

 Score = 43.9 bits (102),  Expect = 4e-04
 Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = +1

Query  202  NLKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGE  381
            +L G+ + + V++ S+T+  +K+KI  +  +P ++Q+L      L+DN+TLA YN+    
Sbjct  247  DLIGKTIPLRVES-SDTIVDVKKKILDKEGIPIHEQRLINDGKQLEDNLTLASYNIQENS  305

Query  382  TLALSLRERG  411
            T+ L LR  G
Sbjct  306  TILLVLRLHG  315


>gi|35187449|gb|AAQ84316.1|  fiber polyubiquitin [Gossypium barbadense]
Length=229

 Score = 43.9 bits (102),  Expect = 4e-04
 Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +1

Query  205  LKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMTLAYYNVGAGET  384
            L G+ + + V++ S+T+ ++K KI  +  +P ++Q+L      L+D  TLA YN+    T
Sbjct  160  LTGKTITLEVES-SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST  218

Query  385  LALSLRERGG  414
            L L LR RGG
Sbjct  219  LPLVLRLRGG  228
Distribution of 226 Blast Hits on the Query Sequence
