Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168944185-3060-17315688405.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig286 Length=550
Score E Sequences producing significant alignments: (Bits) Value gi|79487047|ref|NP_194504.2| unknown protein [Arabidopsis tha... 140 4e-33 gi|79325291|ref|NP_001031733.1| unknown protein [Arabidopsis tha 127 3e-29 gi|27923902|sp|Q9T096|YIPL5_ARATH Protein yippee-like At4g277... 127 3e-29 gi|115488582|ref|NP_001066778.1| Os12g0484700 [Oryza sativa (... 125 1e-28 gi|77555722|gb|ABA98518.1| Yippee-like protein At4g27740, put... 125 1e-28 gi|115485873|ref|NP_001068080.1| Os11g0551800 [Oryza sativa (... 123 4e-28 gi|108706630|gb|ABF94425.1| expressed protein [Oryza sativa (jap 111 1e-24 gi|51970424|dbj|BAD43904.1| zinc-binding protein-like [Arabidops 111 1e-24 gi|15238881|ref|NP_200205.1| unknown protein [Arabidopsis tha... 111 1e-24 gi|18399156|ref|NP_566389.1| unknown protein [Arabidopsis tha... 108 1e-23 gi|27923882|sp|Q8S5M8|YIPL_ORYSA Putative yippee-like protein... 107 3e-23 gi|115454761|ref|NP_001050981.1| Os03g0698500 [Oryza sativa (... 107 4e-23 gi|21617953|gb|AAM67003.1| yippee-like protein [Arabidopsis thal 106 5e-23 gi|42563852|ref|NP_187511.2| unknown protein [Arabidopsis tha... 105 1e-22 gi|5923664|gb|AAD56315.1|AC009326_2 Yippee-like protein [Arabido 102 9e-22 gi|115473037|ref|NP_001060117.1| Os07g0584000 [Oryza sativa (... 99.8 6e-21 gi|15225631|ref|NP_181540.1| unknown protein [Arabidopsis tha... 99.4 7e-21 gi|27923880|sp|P59234|YIPL_SOLTU Protein yippee-like >gi|2474... 98.2 2e-20 gi|42571143|ref|NP_973645.1| unknown protein [Arabidopsis thalia 97.1 4e-20 gi|15228759|ref|NP_191148.1| unknown protein [Arabidopsis tha... 96.3 6e-20 gi|6403488|gb|AAF07828.1|AC010871_4 yippee-like protein [Arabido 82.8 7e-16 gi|115481718|ref|NP_001064452.1| Os10g0369500 [Oryza sativa (... 32.3 1.1 gi|15219276|ref|NP_175741.1| protein binding / zinc ion bindi... 31.6 1.9 gi|75326881|sp|Q7PC83|PDR13_ARATH Probable pleiotropic drug r... 30.4 4.2 gi|22328648|ref|NP_680692.1| ATP binding / ATPase/ nucleoside... 30.4 4.2 gi|1223580|emb|CAA65336.1| ORF [Arabidopsis thaliana] 30.0 5.5 gi|62911365|gb|AAY21335.1| maturase K [Ranunculus bulbosus subsp 29.6 7.2 gi|34328784|gb|AAQ63696.1| NADH:ubiquinone oxidoreductase 51 ... 29.3 9.4 gi|69217289|gb|AAZ04024.1| maturase K [Ranunculus macranthus] 29.3 9.4 gi|62911373|gb|AAY21339.1| maturase K [Ranunculus caucasicus] 29.3 9.4 gi|62911371|gb|AAY21338.1| maturase K [Ranunculus muricatus] 29.3 9.4 gi|62911343|gb|AAY21324.1| maturase K [Ranunculus marginatus]... 29.3 9.4 gi|62911369|gb|AAY21337.1| maturase K [Ranunculus pensylvanicus] 29.3 9.4 gi|62911339|gb|AAY21322.1| maturase K [Ranunculus recurvatus] 29.3 9.4 gi|62911361|gb|AAY21333.1| maturase K [Ranunculus sardous] 29.3 9.4 gi|62911367|gb|AAY21336.1| maturase K [Ranunculus weyleri] 29.3 9.4 gi|62911341|gb|AAY21323.1| maturase K [Ranunculus trilobus] 29.3 9.4 gi|62911363|gb|AAY21334.1| maturase K [Ranunculus neapolitanus] 29.3 9.4 gi|62911355|gb|AAY21330.1| maturase K [Ranunculus multifidus] 29.3 9.4 gi|62911345|gb|AAY21325.1| maturase K [Ranunculus lomatocarpus] 29.3 9.4 gi|68052407|sp|Q507T3|MATK_RANRE Maturase K (Intron maturase)... 29.3 9.4
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 415 Number of extensions: 7 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 550 Length of database: 101054579 Length adjustment: 106 Effective length of query: 444 Effective length of database: 71019585 Effective search space: 5468508045 Effective search space used: 5468508045 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)