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BLASTX 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168944237-7258-198588288289.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig289
Length=571


Distribution of 111 Blast Hits on the Query Sequence



                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|12043533|emb|CAC19789.1|  MYB-like DNA-binding protein [Cathar  49.3    9e-06
gi|115452203|ref|NP_001049702.1|  Os03g0274300 [Oryza sativa (...  32.0    2e-04 Gene info
gi|108707446|gb|ABF95241.1|  initiator-binding protein, putati...  32.0    2e-04
gi|22136006|gb|AAM91585.1|  telomere repeat-binding protein [A...  35.4    4e-04 UniGene info
gi|15238420|ref|NP_200751.1|  DNA binding [Arabidopsis thalian...  35.4    4e-04 UniGene infoGene info
gi|5459298|emb|CAB50690.1|  telomere repeat-binding protein TRP1   35.4    4e-04
gi|9716453|gb|AAF97508.1|AF242298_1  telomere binding protein-1;   37.0    9e-04 UniGene info
gi|115449673|ref|NP_001048524.1|  Os02g0817800 [Oryza sativa (...  37.0    9e-04 Gene info
gi|47847749|dbj|BAD21527.1|  putative telomere binding protein...  37.0    9e-04 Gene info
gi|41619022|gb|AAS10005.1|  MYB transcription factor [Arabidopsis  42.0    0.002 UniGene info
gi|8778539|gb|AAF79547.1|AC022464_5  F22G5.8 [Arabidopsis thalian  42.0    0.002
gi|15222434|ref|NP_172234.1|  TRFL2 (TRF-LIKE 2); DNA binding [Ar  42.0    0.002 UniGene infoGene info
gi|483444|emb|CAA55693.1|  initiator-binding protein [Zea mays]    31.6    0.003 UniGene infoGene info
gi|483490|emb|CAA55691.1|  initiator binding protein [Zea mays]    28.5    0.024 UniGene infoGene info
gi|37730544|gb|AAO61583.1|  telomeric repeat-binding protein 3 [A  35.4    0.14  UniGene info
gi|30698132|ref|NP_201356.2|  ATP binding / kinase/ protein ki...  35.4    0.14  UniGene infoGene info
gi|15230530|ref|NP_187862.1|  TRFL9 (TRF-LIKE 9); DNA binding ...  35.4    0.14  UniGene infoGene info
gi|26452369|dbj|BAC43270.1|  unknown protein [Arabidopsis thal...  35.4    0.14  UniGene info
gi|9294371|dbj|BAB02267.1|  H-protein promoter binding factor-1 [  35.4    0.14 
gi|23664357|gb|AAN39330.1|  telomere binding protein TBP1 [Nicoti  34.7    0.24 
gi|110289151|gb|ABG66100.1|  retrotransposon protein, putative...  33.9    0.41 
gi|17064826|gb|AAL32567.1|  telomere repeat-binding protein homol  33.1    0.70  UniGene info
gi|79314508|ref|NP_001030822.1|  TRFL1 (TRF-LIKE 1); DNA binding   33.1    0.70  UniGene infoGene info
gi|39598800|gb|AAR28946.1|  telomeric repeat-binding protein 4 [A  33.1    0.70  UniGene info
gi|42565667|ref|NP_190243.2|  TRFL1 (TRF-LIKE 1); DNA binding ...  33.1    0.70  UniGene infoGene info
gi|79314485|ref|NP_001030821.1|  TRFL1 (TRF-LIKE 1); DNA bindi...  33.1    0.70  UniGene infoGene info
gi|47900532|gb|AAT39267.1|  putative polyprotein [Oryza sativa...  32.7    0.92  Gene info
gi|115465743|ref|NP_001056471.1|  Os05g0587500 [Oryza sativa (...  32.3    1.2   Gene info
gi|108862657|gb|ABA98136.2|  retrotransposon protein, putative...  32.3    1.2  
gi|48475093|gb|AAT44162.1|  putative polyprotein [Oryza sativa (j  32.3    1.2   Gene info
gi|115436608|ref|NP_001043062.1|  Os01g0371800 [Oryza sativa (...  32.0    1.6   Gene info
gi|119369785|gb|ABL67928.1|  polyphenol oxidase [Glycine max]      31.6    2.0  
gi|53981174|gb|AAV24814.1|  putative polyprotein [Oryza sativa (j  31.6    2.0  
gi|49328112|gb|AAT58810.1|  putative polyprotein [Oryza sativa (j  31.6    2.0  
gi|47777367|gb|AAT38001.1|  Putative polyprotein [Oryza sativa (j  31.6    2.0   Gene info
gi|108864385|gb|ABG22485.1|  retrotransposon protein, putative...  31.2    2.7  
gi|51038138|gb|AAT93941.1|  putative polyprotein [Oryza sativa (j  31.2    2.7  
gi|32487835|emb|CAE05066.1|  OSJNBa0094P09.5 [Oryza sativa (ja...  31.2    2.7   Gene info
gi|15235935|ref|NP_194868.1|  unknown protein [Arabidopsis tha...  31.2    2.7   UniGene infoGene info
gi|57863895|gb|AAG03096.2|AC073405_12  putative polyprotein [O...  31.2    2.7  
gi|77555759|gb|ABA98555.1|  retrotransposon protein, putative,...  31.2    2.7  
gi|117970379|dbj|BAF36749.1|  telomere binding protein [Solanum l  30.8    3.5  
gi|115484025|ref|NP_001065674.1|  Os11g0134100 [Oryza sativa (...  30.4    4.6   Gene info
gi|115475772|ref|NP_001061482.1|  Os08g0298700 [Oryza sativa (...  30.4    4.6   Gene info
gi|115468454|ref|NP_001057826.1|  Os06g0548100 [Oryza sativa (...  30.4    4.6   Gene info
gi|115468948|ref|NP_001058073.1|  Os06g0613800 [Oryza sativa (...  30.4    4.6   Gene info
gi|110289385|gb|AAP54573.2|  retrotransposon protein, putative...  30.4    4.6  
gi|108863988|gb|ABA91445.2|  retrotransposon protein, putative...  30.4    4.6  
gi|108862795|gb|ABA99473.2|  retrotransposon protein, putative...  30.4    4.6  
gi|108862305|gb|ABA96095.2|  retrotransposon protein, putative...  30.4    4.6  
gi|108862766|gb|ABA98797.2|  retrotransposon protein, putative...  30.4    4.6  
gi|108862623|gb|ABA98024.2|  retrotransposon protein, putative...  30.4    4.6  
gi|108710065|gb|ABF97860.1|  retrotransposon protein, putative...  30.4    4.6  
gi|108710670|gb|ABF98465.1|  retrotransposon protein, putative...  30.4    4.6  
gi|108711148|gb|ABF98943.1|  retrotransposon protein, putative...  30.4    4.6  
gi|108708907|gb|ABF96702.1|  retrotransposon protein, putative...  30.4    4.6  
gi|108711058|gb|ABF98853.1|  retrotransposon protein, putative...  30.4    4.6  
gi|54287603|gb|AAV31347.1|  putative polyprotein [Oryza sativa (j  30.4    4.6  
gi|53980940|gb|AAU44026.2|  putative polyprotein [Oryza sativa (j  30.4    4.6  
gi|51038137|gb|AAT93940.1|  putative polyprotein [Oryza sativa (j  30.4    4.6  
gi|50511444|gb|AAT77367.1|  putative polyprotein [Oryza sativa...  30.4    4.6  
gi|50080271|gb|AAT69606.1|  putative polyprotein [Oryza sativa...  30.4    4.6   Gene info
gi|49328150|gb|AAT58846.1|  putative polyprotein [Oryza sativa (j  30.4    4.6  
gi|55733934|gb|AAV59441.1|  putative polyprotein [Oryza sativa (j  30.4    4.6   Gene info
gi|38345215|emb|CAD40198.2|  OSJNBb0043H09.7 [Oryza sativa (japon  30.4    4.6   Gene info
gi|38344281|emb|CAE03764.2|  OSJNBa0013K16.13 [Oryza sativa (japo  30.4    4.6   Gene info
gi|37718811|gb|AAR01682.1|  putative gag and pol protein [Oryz...  30.4    4.6   Gene info
gi|32489125|emb|CAE04792.1|  OSJNBb0018J12.5 [Oryza sativa (japon  30.4    4.6   Gene info
gi|32489064|emb|CAE03994.1|  OSJNBb0089B03.8 [Oryza sativa (japon  30.4    4.6   Gene info
gi|32487304|emb|CAE05795.1|  OSJNBb0046K02.5 [Oryza sativa (japon  30.4    4.6  
gi|30089754|gb|AAP20858.1|  retrotransposon protein, putative,...  30.4    4.6   Gene info
gi|10178281|emb|CAC08339.1|  katanin p80 subunit-like protein [Ar  30.4    4.6  
gi|15231398|ref|NP_187369.1|  hydrolase/ protein serine/threon...  30.4    4.6   UniGene infoGene info
gi|13937286|gb|AAK50117.1|AC087797_2  putative gag-pol polyprotei  30.4    4.6   Gene info
gi|37718845|gb|AAR01716.1|  putative Gag and Pol polyprotein [...  30.4    4.6   Gene info
gi|14626276|gb|AAK71544.1|AC087852_4  putative polyprotein [Oryza  30.4    4.6   Gene info
gi|3192881|gb|AAC19119.1|  starch synthase [Ipomoea batatas]       30.4    4.6  
gi|24431600|gb|AAN61480.1|  Putative polyprotein from transpos...  30.4    4.6   Gene info
gi|77552972|gb|ABA95768.1|  retrotransposon protein, putative,...  30.4    4.6  
gi|77555142|gb|ABA97938.1|  retrotransposon protein, putative,...  30.4    4.6  
gi|77557040|gb|ABA99836.1|  retrotransposon protein, putative,...  30.4    4.6  
gi|77548605|gb|ABA91402.1|  retrotransposon protein, putative,...  30.4    4.6  
gi|77550728|gb|ABA93525.1|  retrotransposon protein, putative,...  30.4    4.6  
gi|77548453|gb|ABA91250.1|  retrotransposon protein, putative,...  30.4    4.6  
gi|62734114|gb|AAX96223.1|  retrotransposon protein, putative,...  30.4    4.6  
gi|62734723|gb|AAX96832.1|  retrotransposon protein, putative,...  30.4    4.6   Gene info
gi|15144313|gb|AAK84454.1|AC087192_15  putative polyprotein [Oryz  30.4    4.6   Gene info
gi|38344663|emb|CAE02325.2|  OSJNBb0112E13.7 [Oryza sativa (japon  30.4    4.6   Gene info
gi|38346534|emb|CAE04541.2|  OSJNBa0040D17.9 [Oryza sativa (japon  30.4    4.6   Gene info
gi|38344873|emb|CAE01299.2|  OSJNBa0020P07.16 [Oryza sativa (japo  30.4    4.6   Gene info
gi|38346634|emb|CAD40744.2|  OSJNBa0072D21.4 [Oryza sativa (japon  30.4    4.6   Gene info
gi|32488578|emb|CAE03086.1|  OSJNBa0017B10.1 [Oryza sativa (ja...  30.4    4.6   Gene info
gi|38346883|emb|CAE03908.2|  OSJNBb0015G09.2 [Oryza sativa (japon  30.0    5.9   Gene info
gi|77551023|gb|ABA93820.1|  retrotransposon protein, putative,...  30.0    5.9  
gi|108709158|gb|ABF96953.1|  retrotransposon protein, putative...  29.6    7.8  
gi|41393211|gb|AAS01934.1|  putative  Integrase core domain co...  29.6    7.8   Gene info
gi|39545722|emb|CAD40924.3|  OSJNBa0033G16.12 [Oryza sativa (japo  29.6    7.8   Gene info
gi|77551394|gb|ABA94191.1|  retrotransposon protein, putative,...  29.6    7.8  
gi|62701755|gb|AAX92828.1|  retrotransposon protein, putative,...  29.6    7.8  
gi|38347007|emb|CAE02261.2|  OSJNBb0058J09.8 [Oryza sativa (japon  29.6    7.8   Gene info
Alignments
>gi|12043533|emb|CAC19789.1| MYB-like DNA-binding protein [Catharanthus roseus] Length=693 Score = 49.3 bits (116), Expect = 9e-06 Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 10/155 (6%) Frame = +3 Query 9 FVSELVPQTNDLNYSSKESPSLQNDAHFGFASVITTSDCSERYDAQK---LMNGKTENEM 179 F+ EL + ++ N S + P+ +ND+ S + +SD S++ D + + N KTE + Sbjct 107 FIPELAVKEHNSNPSLGDLPNTENDSFSERTSTLLSSDFSKKVDCELKLGICNDKTEGNL 166 Query 180 GSFPCKVETGPFVCGTSGDCIKPESQNKGLMYEELDRTDKISIGEVADTCPLEDPVLLDG 359 S K E + G D ++ N+ + E D T + A+ C +++ V Sbjct 167 NS---KAEDDTYALG---DLSNSKTGNESVRQSE-DETKQGKDLTAANPCSVKNTVEKCT 219 Query 360 KPPALVSSDDSGKARSCGDCSPRSSFPAKQDDVNV 464 L++SD S + D P +SFP ++DVN+ Sbjct 220 NRKPLINSDSSVQLSLYRDPLPSASFPKHRNDVNL 254 Score = 31.6 bits (70), Expect = 2.0 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = +1 Query 436 FLQNRmm*m*LVRDDDQNSSGCTH-PTP*KGI*PTPRIGDRRIRKI 570 F ++R +RDDD NS C+ T + P PR G RRIRK+ Sbjct 245 FPKHRNDVNLGIRDDDDNSFRCSKFSTKFRAFRPQPRNGYRRIRKM 290 >gi|115452203|ref|NP_001049702.1| Gene info Os03g0274300 [Oryza sativa (japonica cultivar-group)] gi|113548173|dbj|BAF11616.1| Gene info Os03g0274300 [Oryza sativa (japonica cultivar-group)] Length=730 Score = 32.0 bits (71), Expect(2) = 2e-04 Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = +3 Query 321 DTCPLEDPVLLDGKPPALVSSDDSGKARSCGDCSPRS-SFP 440 D L DP+ +D KPP LVSSD +G+ G+ RS SFP Sbjct 206 DMYNLLDPMDVDVKPPPLVSSDSTGEMPLYGNKIRRSTSFP 246 Score = 32.0 bits (71), Expect(2) = 2e-04 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Frame = +1 Query 475 DDDQNSSGCTHPT--P*KGI*PTPRIGDRRIRKI 570 DDD SSGCTHP+ +G P G R++K+ Sbjct 262 DDDDKSSGCTHPSTATNRGFRPNCTAGHSRVKKL 295 >gi|108707446|gb|ABF95241.1| initiator-binding protein, putative, expressed [Oryza sativa (japonica cultivar-group)] Length=692 Score = 32.0 bits (71), Expect(2) = 2e-04 Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = +3 Query 321 DTCPLEDPVLLDGKPPALVSSDDSGKARSCGDCSPRS-SFP 440 D L DP+ +D KPP LVSSD +G+ G+ RS SFP Sbjct 206 DMYNLLDPMDVDVKPPPLVSSDSTGEMPLYGNKIRRSTSFP 246 Score = 32.0 bits (71), Expect(2) = 2e-04 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Frame = +1 Query 475 DDDQNSSGCTHPT--P*KGI*PTPRIGDRRIRKI 570 DDD SSGCTHP+ +G P G R++K+ Sbjct 262 DDDDKSSGCTHPSTATNRGFRPNCTAGHSRVKKL 295 >gi|22136006|gb|AAM91585.1| UniGene info telomere repeat-binding protein [Arabidopsis thaliana] gi|23197818|gb|AAN15436.1| UniGene info telomere repeat-binding protein [Arabidopsis thaliana] Length=578 Score = 35.4 bits (80), Expect(2) = 4e-04 Identities = 21/34 (61%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +1 Query 472 RDDDQNSSGCTHPTP*KGI*PT-PRIGDRRIRKI 570 RDDD+N S HP K T PRIGDRRIRKI Sbjct 187 RDDDENFSKYIHPRVTKHSPRTVPRIGDRRIRKI 220 Score = 27.7 bits (60), Expect(2) = 4e-04 Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 32/110 (29%) Frame = +3 Query 150 LMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYEELDRTDKISIGEVADTC 329 ++NGK ENE+ F + G +KP+ Sbjct 108 VINGKVENEVDGFSYSGGSDACQVGNFSQDVKPDIDG----------------------- 144 Query 330 PLEDPVLLDGKPPALVSSDDSGKAR--SCGDCSPRSSFPAKQDDVNVVSK 473 D V+LD +P +VS S + S G+C +DDVN+ S+ Sbjct 145 ---DAVVLDARPNVVVSLGSSSRTEVPSIGNCVSH----GVRDDVNLFSR 187 >gi|15238420|ref|NP_200751.1| UniGene infoGene info DNA binding [Arabidopsis thaliana] gi|30697221|ref|NP_851221.1| UniGene infoGene info DNA binding [Arabidopsis thaliana] gi|8885549|dbj|BAA97479.1| Gene info telomere repeat-binding protein [Arabidopsis thaliana] gi|41619060|gb|AAS10014.1| UniGene infoGene info MYB transcription factor [Arabidopsis thaliana] Length=578 Score = 35.4 bits (80), Expect(2) = 4e-04 Identities = 21/34 (61%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +1 Query 472 RDDDQNSSGCTHPTP*KGI*PT-PRIGDRRIRKI 570 RDDD+N S HP K T PRIGDRRIRKI Sbjct 187 RDDDENFSKYIHPRVTKHSPRTVPRIGDRRIRKI 220 Score = 27.7 bits (60), Expect(2) = 4e-04 Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 32/110 (29%) Frame = +3 Query 150 LMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYEELDRTDKISIGEVADTC 329 ++NGK ENE+ F + G +KP+ Sbjct 108 VINGKVENEVDGFSYSGGSDACQVGNFSQDVKPDIDG----------------------- 144 Query 330 PLEDPVLLDGKPPALVSSDDSGKAR--SCGDCSPRSSFPAKQDDVNVVSK 473 D V+LD +P +VS S + S G+C +DDVN+ S+ Sbjct 145 ---DAVVLDARPNVVVSLGSSSRTEVPSIGNCVSH----GVRDDVNLFSR 187 >gi|5459298|emb|CAB50690.1| telomere repeat-binding protein TRP1 [Arabidopsis thaliana] Length=578 Score = 35.4 bits (80), Expect(2) = 4e-04 Identities = 21/34 (61%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +1 Query 472 RDDDQNSSGCTHPTP*KGI*PT-PRIGDRRIRKI 570 RDDD+N S HP K T PRIGDRRIRKI Sbjct 187 RDDDENFSKYIHPRVTKHSPRTVPRIGDRRIRKI 220 Score = 27.7 bits (60), Expect(2) = 4e-04 Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 32/110 (29%) Frame = +3 Query 150 LMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYEELDRTDKISIGEVADTC 329 ++NGK ENE+ F + G +KP+ Sbjct 108 VINGKVENEVDGFSYSGGSDACQVGNFSQDVKPDIDG----------------------- 144 Query 330 PLEDPVLLDGKPPALVSSDDSGKAR--SCGDCSPRSSFPAKQDDVNVVSK 473 D V+LD +P +VS S + S G+C +DDVN+ S+ Sbjct 145 ---DAVVLDARPNVVVSLGSSSRTEVPSIGNCVSH----GVRDDVNLFSR 187 >gi|9716453|gb|AAF97508.1|AF242298_1 UniGene info telomere binding protein-1; TBP1 [Oryza sativa] Length=633 Score = 37.0 bits (84), Expect(2) = 9e-04 Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 4/36 (11%) Frame = +1 Query 472 RDDDQNSSGCTHPTP---*KGI*PTPRIGDRRIRKI 570 RDDD+NSSGC HP+ +G P IGDRRIR++ Sbjct 257 RDDDENSSGCVHPSTSGNNRGYIP-HYIGDRRIRRL 291 Score = 25.0 bits (53), Expect(2) = 9e-04 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 0/44 (0%) Frame = +3 Query 312 EVADTCPLEDPVLLDGKPPALVSSDDSGKARSCGDCSPRSSFPA 443 + A C L + + LD KP A SS + CG +S P+ Sbjct 203 DAAALCALVETMDLDTKPLAEASSGSNSGVHICGPDRGHNSHPS 246 >gi|115449673|ref|NP_001048524.1| Gene info Os02g0817800 [Oryza sativa (japonica cultivar-group)] gi|47847748|dbj|BAD21526.1| Gene info putative telomere binding protein-1; TBP1 [Oryza sativa (japonica cultivar-group)] gi|48716343|dbj|BAD22954.1| Gene info putative telomere binding protein-1; TBP1 [Oryza sativa (japonica cultivar-group)] gi|113538055|dbj|BAF10438.1| Gene info Os02g0817800 [Oryza sativa (japonica cultivar-group)] Length=361 Score = 37.0 bits (84), Expect(2) = 9e-04 Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 4/36 (11%) Frame = +1 Query 472 RDDDQNSSGCTHPTP---*KGI*PTPRIGDRRIRKI 570 RDDD+NSSGC HP+ +G P IGDRRIR++ Sbjct 257 RDDDENSSGCVHPSTSGNNRGYIP-HYIGDRRIRRL 291 Score = 25.0 bits (53), Expect(2) = 9e-04 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 0/44 (0%) Frame = +3 Query 312 EVADTCPLEDPVLLDGKPPALVSSDDSGKARSCGDCSPRSSFPA 443 + A C L + + LD KP A SS + CG +S P+ Sbjct 203 DAAALCALVETMDLDTKPLAEASSGSNSGVHICGPDRGHNSHPS 246 >gi|47847749|dbj|BAD21527.1| Gene info putative telomere binding protein-1; TBP1 [Oryza sativa (japonica cultivar-group)] gi|48716344|dbj|BAD22955.1| Gene info putative telomere binding protein-1; TBP1 [Oryza sativa (japonica cultivar-group)] Length=358 Score = 37.0 bits (84), Expect(2) = 9e-04 Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 4/36 (11%) Frame = +1 Query 472 RDDDQNSSGCTHPTP---*KGI*PTPRIGDRRIRKI 570 RDDD+NSSGC HP+ +G P IGDRRIR++ Sbjct 257 RDDDENSSGCVHPSTSGNNRGYIP-HYIGDRRIRRL 291 Score = 25.0 bits (53), Expect(2) = 9e-04 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 0/44 (0%) Frame = +3 Query 312 EVADTCPLEDPVLLDGKPPALVSSDDSGKARSCGDCSPRSSFPA 443 + A C L + + LD KP A SS + CG +S P+ Sbjct 203 DAAALCALVETMDLDTKPLAEASSGSNSGVHICGPDRGHNSHPS 246 >gi|41619022|gb|AAS10005.1| UniGene info MYB transcription factor [Arabidopsis thaliana] Length=630 Score = 42.0 bits (97), Expect = 0.002 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 19/100 (19%) Frame = +3 Query 6 FFVSELVPQTNDLNYSSKESPSLQNDAHFGFASVITTSDCSERYDAQKLMNGKTENEMGS 185 FFVSE++ +++++ S SPS + HFG +S I TSD SE+++ Q+L +++ Sbjct 107 FFVSEILQKSHEMQ-SFNRSPSPLKEFHFGSSSGI-TSDSSEKFETQELAYDESKI---- 160 Query 186 FPCKVETGPFVCGTSGDCIKPESQNKGLMYEELDRTDKIS 305 +GDC + ES +K M L+ K+S Sbjct 161 -------------NNGDCYRSESNDKKSMLGGLNFEAKLS 187 >gi|8778539|gb|AAF79547.1|AC022464_5 F22G5.8 [Arabidopsis thaliana] Length=707 Score = 42.0 bits (97), Expect = 0.002 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 19/100 (19%) Frame = +3 Query 6 FFVSELVPQTNDLNYSSKESPSLQNDAHFGFASVITTSDCSERYDAQKLMNGKTENEMGS 185 FFVSE++ +++++ S SPS + HFG +S I TSD SE+++ Q+L +++ Sbjct 107 FFVSEILQKSHEMQ-SFNRSPSPLKEFHFGSSSGI-TSDSSEKFETQELAYDESKI---- 160 Query 186 FPCKVETGPFVCGTSGDCIKPESQNKGLMYEELDRTDKIS 305 +GDC + ES +K M L+ K+S Sbjct 161 -------------NNGDCYRSESNDKKSMLGGLNFEAKLS 187 >gi|15222434|ref|NP_172234.1| UniGene infoGene info TRFL2 (TRF-LIKE 2); DNA binding [Arabidopsis thaliana] Length=622 Score = 42.0 bits (97), Expect = 0.002 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 19/100 (19%) Frame = +3 Query 6 FFVSELVPQTNDLNYSSKESPSLQNDAHFGFASVITTSDCSERYDAQKLMNGKTENEMGS 185 FFVSE++ +++++ S SPS + HFG +S I TSD SE+++ Q+L +++ Sbjct 107 FFVSEILQKSHEMQ-SFNRSPSPLKEFHFGSSSGI-TSDSSEKFETQELAYDESKI---- 160 Query 186 FPCKVETGPFVCGTSGDCIKPESQNKGLMYEELDRTDKIS 305 +GDC + ES +K M L+ K+S Sbjct 161 -------------NNGDCYRSESNDKKSMLGGLNFEAKLS 187 >gi|483444|emb|CAA55693.1| UniGene infoGene info initiator-binding protein [Zea mays] Length=684 Score = 31.6 bits (70), Expect(2) = 0.003 Identities = 37/134 (27%), Positives = 48/134 (35%), Gaps = 42/134 (31%) Frame = +3 Query 126 SERYDAQKLMNGKTENEMGS---------FPCKVETGPFVCGTSGDCIKPES----QNKG 266 SE D + M T+ E+G P VE+G F + P +N Sbjct 135 SEAQDKESSMISCTKAELGCNFGVIADRWSPESVESGAFTGDAVASLMPPAPAGFHKNAP 194 Query 267 LMYEELDRTDKISIGEVADTCPLEDPVLLDGKPPALVSSDDSGKARSCGDCSPRSS---- 434 MY LD D +D KPP LVSSD +G+ GD RS+ Sbjct 195 EMYNLLDSMD------------------VDVKPPPLVSSDSTGEMPLYGDKVHRSTSLPR 236 Query 435 -------FPAKQDD 455 FP +DD Sbjct 237 VSKGVGFFPVDRDD 250 Score = 28.5 bits (62), Expect(2) = 0.003 Identities = 10/13 (76%), Positives = 11/13 (84%), Gaps = 0/13 (0%) Frame = +1 Query 475 DDDQNSSGCTHPT 513 DDD SSGCTHP+ Sbjct 250 DDDDKSSGCTHPS 262 >gi|483490|emb|CAA55691.1| UniGene infoGene info initiator binding protein [Zea mays] Length=680 Score = 28.5 bits (62), Expect(2) = 0.024 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 0/34 (0%) Frame = +3 Query 333 LEDPVLLDGKPPALVSSDDSGKARSCGDCSPRSS 434 L D + +D KPP LVSSD +G+ GD RS+ Sbjct 200 LLDSMDVDVKPPPLVSSDSTGEMPLHGDKIHRST 233 Score = 28.5 bits (62), Expect(2) = 0.024 Identities = 10/13 (76%), Positives = 11/13 (84%), Gaps = 0/13 (0%) Frame = +1 Query 475 DDDQNSSGCTHPT 513 DDD SSGCTHP+ Sbjct 251 DDDDKSSGCTHPS 263 >gi|37730544|gb|AAO61583.1| UniGene info telomeric repeat-binding protein 3 [Arabidopsis thaliana] Length=619 Score = 35.4 bits (80), Expect = 0.14 Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 12/118 (10%) Frame = +3 Query 249 ESQNKGLMYEELDRTDKISIGE-VADTCPLEDPVLLDGKPPALVSSDDSGKARSCGDCSP 425 E++N +E+ + TD++ G V DTC LED L + P V K+ S D +P Sbjct 142 ENKNVNNGFEQGEATDRVGDGGLVTDTCNLEDATALGLQFPKSVCVGGDLKSPSTLDMTP 201 Query 426 RSSFP---------AKQDDVNVVSKR**PKLFRVYSPYPIKRHLAHPS--YWRQKNKE 566 S+ K DD S F+ Y I+R S YW+Q K+ Sbjct 202 NGSYARHGNHTNLGRKDDDEKFYSYHKLSNKFKSYRSPTIRRIRKSMSSKYWKQVPKD 259 >gi|30698132|ref|NP_201356.2| UniGene infoGene info ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase [Arabidopsis thaliana] Length=456 Score = 35.4 bits (80), Expect = 0.14 Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 12/75 (16%) Frame = +3 Query 249 ESQNKGLMYEELDRTDKISIGEVADTCPLEDPVLLDGKPPALVSSDDSGKARSCGDCSP- 425 E + KG EL + D +SI + + C LE PV+ S DS + SC CSP Sbjct 7 EKKIKGSQETELHKND-LSIEDPSPRCVLEIPVM----------SSDSDNSSSCSSCSPD 55 Query 426 RSSFPAKQDDVNVVS 470 +SS P NV S Sbjct 56 KSSSPLSTTPPNVSS 70 >gi|15230530|ref|NP_187862.1| UniGene infoGene info TRFL9 (TRF-LIKE 9); DNA binding [Arabidopsis thaliana] gi|12321981|gb|AAG51038.1|AC069474_37 Gene info myb-family transcription factor, putative; 42946-45522 [Arabidopsis thaliana] gi|30102684|gb|AAP21260.1| UniGene infoGene info At3g12560 [Arabidopsis thaliana] gi|45357108|gb|AAS58513.1| UniGene infoGene info MYB transcription factor [Arabidopsis thaliana] gi|110743875|dbj|BAE99772.1| Gene info hypothetical protein [Arabidopsis thaliana] Length=619 Score = 35.4 bits (80), Expect = 0.14 Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 12/118 (10%) Frame = +3 Query 249 ESQNKGLMYEELDRTDKISIGE-VADTCPLEDPVLLDGKPPALVSSDDSGKARSCGDCSP 425 E++N +E+ + TD++ G V DTC LED L + P V K+ S D +P Sbjct 142 ENKNVNNGFEQGEATDRVGDGGLVTDTCNLEDATALGLQFPKSVCVGGDLKSPSTLDMTP 201 Query 426 RSSFP---------AKQDDVNVVSKR**PKLFRVYSPYPIKRHLAHPS--YWRQKNKE 566 S+ K DD S F+ Y I+R S YW+Q K+ Sbjct 202 NGSYARHGNHTNLGRKDDDEKFYSYHKLSNKFKSYRSPTIRRIRKSMSSKYWKQVPKD 259 >gi|26452369|dbj|BAC43270.1| UniGene info unknown protein [Arabidopsis thaliana] gi|28951057|gb|AAO63452.1| UniGene info At5g65530 [Arabidopsis thaliana] Length=456 Score = 35.4 bits (80), Expect = 0.14 Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 12/75 (16%) Frame = +3 Query 249 ESQNKGLMYEELDRTDKISIGEVADTCPLEDPVLLDGKPPALVSSDDSGKARSCGDCSP- 425 E + KG EL + D +SI + + C LE PV+ S DS + SC CSP Sbjct 7 EKKIKGSQETELHKND-LSIEDPSPRCVLEIPVM----------SSDSDNSSSCSSCSPD 55 Query 426 RSSFPAKQDDVNVVS 470 +SS P NV S Sbjct 56 KSSSPLSTTPPNVSS 70 >gi|9294371|dbj|BAB02267.1| H-protein promoter binding factor-1 [Arabidopsis thaliana] Length=637 Score = 35.4 bits (80), Expect = 0.14 Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 12/118 (10%) Frame = +3 Query 249 ESQNKGLMYEELDRTDKISIGE-VADTCPLEDPVLLDGKPPALVSSDDSGKARSCGDCSP 425 E++N +E+ + TD++ G V DTC LED L + P V K+ S D +P Sbjct 142 ENKNVNNGFEQGEATDRVGDGGLVTDTCNLEDATALGLQFPKSVCVGGDLKSPSTLDMTP 201 Query 426 RSSFP---------AKQDDVNVVSKR**PKLFRVYSPYPIKRHLAHPS--YWRQKNKE 566 S+ K DD S F+ Y I+R S YW+Q K+ Sbjct 202 NGSYARHGNHTNLGRKDDDEKFYSYHKLSNKFKSYRSPTIRRIRKSMSSKYWKQVPKD 259 >gi|23664357|gb|AAN39330.1| telomere binding protein TBP1 [Nicotiana glutinosa] Length=681 Score = 34.7 bits (78), Expect = 0.24 Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Frame = +1 Query 436 FLQNRmm*m*LVRDDDQNSSGC-THPTP*KGI*PTPRIGDRRIRKI 570 F++ R VRDDD NS GC + T + T RIG RRIRK+ Sbjct 231 FVKQRNSVKLGVRDDDDNSFGCYRYSTKLRTFRTTSRIGYRRIRKM 276 >gi|110289151|gb|ABG66100.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa (japonica cultivar-group)] Length=172 Score = 33.9 bits (76), Expect = 0.41 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%) Frame = +3 Query 123 CSERYDAQKLMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYE--ELDRTD 296 C +Y AQ+ N K + + + P + E FVCG G + Q KG+ + ++ Sbjct 51 CKGKYKAQQTTNFKKQKKKNNKPNQDERTCFVCGQPGHLARKCPQRKGMKAPAGQTSKSA 110 Query 297 KISIGEVAD 323 ++IG D Sbjct 111 NVTIGNTGD 119 >gi|17064826|gb|AAL32567.1| UniGene info telomere repeat-binding protein homolog [Arabidopsis thaliana] Length=312 Score = 33.1 bits (74), Expect = 0.70 Identities = 18/32 (56%), Positives = 20/32 (62%), Gaps = 3/32 (9%) Frame = +1 Query 475 DDDQNSSGCTHPTP*KGI*PTPRIGDRRIRKI 570 DDD+N SG + P PRIGDRRIRKI Sbjct 173 DDDENFSGYIRTRMTR---PVPRIGDRRIRKI 201 >gi|79314508|ref|NP_001030822.1| UniGene infoGene info TRFL1 (TRF-LIKE 1); DNA binding [Arabidopsis thaliana] Length=541 Score = 33.1 bits (74), Expect = 0.70 Identities = 18/32 (56%), Positives = 20/32 (62%), Gaps = 3/32 (9%) Frame = +1 Query 475 DDDQNSSGCTHPTP*KGI*PTPRIGDRRIRKI 570 DDD+N SG + P PRIGDRRIRKI Sbjct 172 DDDENFSGYIRTRMTR---PVPRIGDRRIRKI 200 >gi|39598800|gb|AAR28946.1| UniGene info telomeric repeat-binding protein 4 [Arabidopsis thaliana] Length=547 Score = 33.1 bits (74), Expect = 0.70 Identities = 18/32 (56%), Positives = 20/32 (62%), Gaps = 3/32 (9%) Frame = +1 Query 475 DDDQNSSGCTHPTP*KGI*PTPRIGDRRIRKI 570 DDD+N SG + P PRIGDRRIRKI Sbjct 173 DDDENFSGYIRTRMTR---PVPRIGDRRIRKI 201 >gi|42565667|ref|NP_190243.2| UniGene infoGene info TRFL1 (TRF-LIKE 1); DNA binding [Arabidopsis thaliana] gi|41619048|gb|AAS10011.1| UniGene infoGene info MYB transcription factor [Arabidopsis thaliana] gi|45935005|gb|AAS79537.1| UniGene infoGene info telomere repeat-binding protein-like [Arabidopsis thaliana] gi|46367444|emb|CAG25848.1| UniGene infoGene info telomere repeat-binding protein homologue [Arabidopsis thaliana] Length=552 Score = 33.1 bits (74), Expect = 0.70 Identities = 18/32 (56%), Positives = 20/32 (62%), Gaps = 3/32 (9%) Frame = +1 Query 475 DDDQNSSGCTHPTP*KGI*PTPRIGDRRIRKI 570 DDD+N SG + P PRIGDRRIRKI Sbjct 172 DDDENFSGYIRTRMTR---PVPRIGDRRIRKI 200 >gi|79314485|ref|NP_001030821.1| UniGene infoGene info TRFL1 (TRF-LIKE 1); DNA binding [Arabidopsis thaliana] gi|6523062|emb|CAB62329.1| Gene info telomere repeat-binding protein homolog [Arabidopsis thaliana] gi|110739261|dbj|BAF01544.1| Gene info telomere repeat-binding protein like [Arabidopsis thaliana] Length=553 Score = 33.1 bits (74), Expect = 0.70 Identities = 18/32 (56%), Positives = 20/32 (62%), Gaps = 3/32 (9%) Frame = +1 Query 475 DDDQNSSGCTHPTP*KGI*PTPRIGDRRIRKI 570 DDD+N SG + P PRIGDRRIRKI Sbjct 173 DDDENFSGYIRTRMTR---PVPRIGDRRIRKI 201 >gi|47900532|gb|AAT39267.1| Gene info putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|50878407|gb|AAT85181.1| Gene info putative polyprotein [Oryza sativa (japonica cultivar-group)] Length=1297 Score = 32.7 bits (73), Expect = 0.92 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = +3 Query 129 ERYDAQKLMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYE--ELDRTDKI 302 E+Y AQ+ N K + + + P + E FVCG G + Q+KG+ + ++ + Sbjct 215 EKYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQHKGMKAPAGQTSKSANV 274 Query 303 SIGEVAD 323 +IG D Sbjct 275 TIGNTGD 281 >gi|115465743|ref|NP_001056471.1| Gene info Os05g0587500 [Oryza sativa (japonica cultivar-group)] gi|113580022|dbj|BAF18385.1| Gene info Os05g0587500 [Oryza sativa (japonica cultivar-group)] Length=1456 Score = 32.3 bits (72), Expect = 1.2 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Frame = +3 Query 132 RYDAQKLMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYE--ELDRTDKIS 305 +Y AQ+ N K + + + P + E FVCG G + SQ KG+ + ++ ++ Sbjct 412 KYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCSQRKGMKAPAGQTSKSANVT 471 Query 306 IGEVAD 323 IG D Sbjct 472 IGNTGD 477 >gi|108862657|gb|ABA98136.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa (japonica cultivar-group)] Length=1249 Score = 32.3 bits (72), Expect = 1.2 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Frame = +3 Query 132 RYDAQKLMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYE--ELDRTDKIS 305 +Y AQ+ N K + + + P + E FVCG G + Q KG+ + ++ K++ Sbjct 216 KYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSAKVT 275 Query 306 IGEVAD 323 IG D Sbjct 276 IGNTGD 281 >gi|48475093|gb|AAT44162.1| Gene info putative polyprotein [Oryza sativa (japonica cultivar-group)] Length=1302 Score = 32.3 bits (72), Expect = 1.2 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Frame = +3 Query 132 RYDAQKLMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYE--ELDRTDKIS 305 +Y AQ+ N K + + + P + E FVCG G + SQ KG+ + ++ ++ Sbjct 216 KYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCSQRKGMKAPAGQTSKSANVT 275 Query 306 IGEVAD 323 IG D Sbjct 276 IGNTGD 281 >gi|115436608|ref|NP_001043062.1| Gene info Os01g0371800 [Oryza sativa (japonica cultivar-group)] gi|113532593|dbj|BAF04976.1| Gene info Os01g0371800 [Oryza sativa (japonica cultivar-group)] Length=1573 Score = 32.0 bits (71), Expect = 1.6 Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 4/111 (3%) Frame = +3 Query 3 KFFVSELVPQTNDLNYSSKESPSLQNDAHFGFASVI--TTSDCSERYDAQKLMNGKTENE 176 ++FV L+ + + ++ + + D A+V+ + +Y AQ+ N K + Sbjct 152 EYFVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKN 211 Query 177 MGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYE--ELDRTDKISIGEVAD 323 + P + E FVCG G + Q KG+ + ++ ++IG D Sbjct 212 NNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGD 262 >gi|119369785|gb|ABL67928.1| polyphenol oxidase [Glycine max] Length=191 Score = 31.6 bits (70), Expect = 2.0 Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 6/89 (6%) Frame = +3 Query 18 ELVPQTN-DLNYSSKESPSLQNDAHFGFASVITTSDCSERYDAQKLMNGKTENEMGSFPC 194 ++ P T DLNY S + PS++ + + SV++ + + + + GK + E+G Sbjct 87 DITPDTLVDLNYGSGKDPSVEQNLGVMYTSVVSGAKRASLFHGKAFFAGK-QPELGG--G 143 Query 195 KVETGPFVC--GTSGDCIKPESQNKGLMY 275 VE GP +GD +P ++ G Y Sbjct 144 TVELGPHTALHRWTGDPRQPNKEDMGRFY 172 >gi|53981174|gb|AAV24814.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] Length=1289 Score = 31.6 bits (70), Expect = 2.0 Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 3/105 (2%) Frame = +3 Query 132 RYDAQKLMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYE--ELDRTDKIS 305 +Y AQ+ N K + + + P + E FVCG G + Q KG+ + ++ ++ Sbjct 216 KYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVT 275 Query 306 IGEVADTCPLED-PVLLDGKPPALVSSDDSGKARSCGDCSPRSSF 437 IG D + P + + D C D S SS+ Sbjct 276 IGNTGDGSGYGNLPTVFSVNQSTNLWVDTGANVHVCADISLFSSY 320 >gi|49328112|gb|AAT58810.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] Length=1320 Score = 31.6 bits (70), Expect = 2.0 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Frame = +3 Query 132 RYDAQKLMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYE--ELDRTDKIS 305 +Y AQ+ N K + + + P + E FVCG G + Q KG+ + ++ ++ Sbjct 216 KYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVT 275 Query 306 IGEVAD 323 IG + D Sbjct 276 IGNIGD 281 >gi|47777367|gb|AAT38001.1| Gene info Putative polyprotein [Oryza sativa (japonica cultivar-group)] Length=1297 Score = 31.6 bits (70), Expect = 2.0 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Frame = +3 Query 132 RYDAQKLMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYE--ELDRTDKIS 305 +Y AQ+ N K + + + P + E FVCG G + Q KG+ + ++ ++ Sbjct 216 KYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVT 275 Query 306 IGEVAD 323 IG + D Sbjct 276 IGNIGD 281 >gi|108864385|gb|ABG22485.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa (japonica cultivar-group)] Length=1132 Score = 31.2 bits (69), Expect = 2.7 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Frame = +3 Query 132 RYDAQKLMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLM--YEELDRTDKIS 305 +Y AQ+ N K + + + P + E FVCG G + Q KG+ + ++ ++ Sbjct 193 KYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQPGHLARKCPQRKGMKTPTSQTSKSANVT 252 Query 306 IGEVAD 323 IG D Sbjct 253 IGNTGD 258 >gi|51038138|gb|AAT93941.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] Length=1433 Score = 31.2 bits (69), Expect = 2.7 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Frame = +3 Query 132 RYDAQKLMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGL--MYEELDRTDKIS 305 +Y AQ+ N K + + + P + E FVCG G + Q KG+ + + ++ ++ Sbjct 216 KYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKALAGQTSKSANVT 275 Query 306 IGEVAD 323 IG D Sbjct 276 IGNTGD 281 >gi|32487835|emb|CAE05066.1| Gene info OSJNBa0094P09.5 [Oryza sativa (japonica cultivar-group)] gi|32492383|emb|CAE05129.1| Gene info OSJNBa0079F16.21 [Oryza sativa (japonica cultivar-group)] Length=849 Score = 31.2 bits (69), Expect = 2.7 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 2/83 (2%) Frame = +3 Query 132 RYDAQKLMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYE--ELDRTDKIS 305 +Y AQ+ N K + + + P + E FVCG G + Q KG+ + ++ ++ Sbjct 103 KYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQPGHLARKCPQRKGMKAPAGQTSKSANVT 162 Query 306 IGEVADTCPLEDPVLLDGKPPAL 374 IG D LL K AL Sbjct 163 IGNTGDGSGFCYVYLLKTKDEAL 185 >gi|15235935|ref|NP_194868.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|2827535|emb|CAA16543.1| Gene info hypothetical protein [Arabidopsis thaliana] gi|7270042|emb|CAB79858.1| Gene info hypothetical protein [Arabidopsis thaliana] Length=322 Score = 31.2 bits (69), Expect = 2.7 Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 6/92 (6%) Frame = +3 Query 18 ELVPQTNDLNYSSKESPSLQNDAHFGFASVITTSDCSERYDAQKLMNGKTENEMGSFPCK 197 +L+ +D KES S + + F +++ + S+R + + + +N G C+ Sbjct 223 KLIASPDDERQLQKESSSSPSTS-IQFGNIVLQREVSKRC---RTSDDRLDN--GVIVCE 276 Query 198 VETGPFVCGTSGDCIKPESQNKGLMYEELDRT 293 E P VCG + P ++ KG+ LD T Sbjct 277 EEAKPAVCGIRAIWVSPSNRRKGIATWLLDTT 308 >gi|57863895|gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|57863849|gb|AAW56890.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] Length=1274 Score = 31.2 bits (69), Expect = 2.7 Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 4/111 (3%) Frame = +3 Query 3 KFFVSELVPQTNDLNYSSKESPSLQNDAHFGFASVI--TTSDCSERYDAQKLMNGKTENE 176 ++ V L+ N + ++ + + D A+V+ + +Y AQ+ N K + + Sbjct 171 EYSVEGLIASLNVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKK 230 Query 177 MGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYE--ELDRTDKISIGEVAD 323 + P + E FVCG G + Q KG+ + ++ ++IG D Sbjct 231 NNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGD 281 >gi|77555759|gb|ABA98555.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa (japonica cultivar-group)] Length=1361 Score = 31.2 bits (69), Expect = 2.7 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Frame = +3 Query 132 RYDAQKLMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYE--ELDRTDKIS 305 +Y AQ+ N K + + + P + E FVCG G + Q KG+ + ++ ++ Sbjct 301 KYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSADVT 360 Query 306 IGEVAD 323 IG + D Sbjct 361 IGNIGD 366 >gi|117970379|dbj|BAF36749.1| telomere binding protein [Solanum lycopersicum] Length=689 Score = 30.8 bits (68), Expect = 3.5 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = +1 Query 436 FLQNRmm*m*LVRDDDQNSSGC-THPTP*KGI*PTPRIGDRRIRKI 570 F++ R VRDDD+NS C + + T R+G RRIRK+ Sbjct 239 FVKQRNSVKLGVRDDDENSFDCYRYSAKLRAFRTTSRLGYRRIRKM 284 >gi|115484025|ref|NP_001065674.1| Gene info Os11g0134100 [Oryza sativa (japonica cultivar-group)] gi|113644378|dbj|BAF27519.1| Gene info Os11g0134100 [Oryza sativa (japonica cultivar-group)] Length=1877 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Frame = +3 Query 132 RYDAQKLMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYE--ELDRTDKIS 305 +Y AQ+ N K + + + P + E FVCG G + Q KG+ + ++ ++ Sbjct 374 KYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVT 433 Query 306 IGEVAD 323 IG D Sbjct 434 IGNTGD 439 >gi|115475772|ref|NP_001061482.1| Gene info Os08g0298700 [Oryza sativa (japonica cultivar-group)] gi|113623451|dbj|BAF23396.1| Gene info Os08g0298700 [Oryza sativa (japonica cultivar-group)] Length=963 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Frame = +3 Query 132 RYDAQKLMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYE--ELDRTDKIS 305 +Y AQ+ N K + + + P + E FVCG G + Q KG+ + ++ ++ Sbjct 418 KYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVT 477 Query 306 IGEVAD 323 IG D Sbjct 478 IGNTGD 483 >gi|115468454|ref|NP_001057826.1| Gene info Os06g0548100 [Oryza sativa (japonica cultivar-group)] gi|113595866|dbj|BAF19740.1| Gene info Os06g0548100 [Oryza sativa (japonica cultivar-group)] Length=1746 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Frame = +3 Query 132 RYDAQKLMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYE--ELDRTDKIS 305 +Y AQ+ N K + + + P + E FVCG G + Q KG+ + ++ ++ Sbjct 112 KYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVT 171 Query 306 IGEVAD 323 IG D Sbjct 172 IGNTGD 177 >gi|115468948|ref|NP_001058073.1| Gene info Os06g0613800 [Oryza sativa (japonica cultivar-group)] gi|113596113|dbj|BAF19987.1| Gene info Os06g0613800 [Oryza sativa (japonica cultivar-group)] Length=1506 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Frame = +3 Query 132 RYDAQKLMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYE--ELDRTDKIS 305 +Y AQ+ N K + + + P + E FVCG G + Q KG+ + ++ ++ Sbjct 596 KYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVT 655 Query 306 IGEVAD 323 IG D Sbjct 656 IGNTGD 661 >gi|110289385|gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa (japonica cultivar-group)] Length=1320 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Frame = +3 Query 132 RYDAQKLMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYE--ELDRTDKIS 305 +Y AQ+ N K + + + P + E FVCG G + Q KG+ + ++ ++ Sbjct 216 KYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVT 275 Query 306 IGEVAD 323 IG D Sbjct 276 IGNTGD 281 >gi|108863988|gb|ABA91445.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa (japonica cultivar-group)] Length=1320 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Frame = +3 Query 132 RYDAQKLMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYE--ELDRTDKIS 305 +Y AQ+ N K + + + P + E FVCG G + Q KG+ + ++ ++ Sbjct 216 KYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVT 275 Query 306 IGEVAD 323 IG D Sbjct 276 IGNTGD 281 >gi|108862795|gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa (japonica cultivar-group)] Length=1287 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Frame = +3 Query 132 RYDAQKLMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYE--ELDRTDKIS 305 +Y AQ+ N K + + + P + E FVCG G + Q KG+ + ++ ++ Sbjct 177 KYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVT 236 Query 306 IGEVAD 323 IG D Sbjct 237 IGNTGD 242 >gi|108862305|gb|ABA96095.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa (japonica cultivar-group)] Length=585 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Frame = +3 Query 132 RYDAQKLMNGKTENEMGSFPCKVETGPFVCGTSGDCIKPESQNKGLMYE--ELDRTDKIS 305 +Y AQ+ N K + + + P + E FVCG G + Q KG+ + ++ ++ Sbjct 216 KYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVT 275 Query 306 IGEVAD 323 IG D Sbjct 276 IGNTGD 281
  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 422
Number of extensions: 11
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 571
Length of database: 101054579
Length adjustment: 107
Effective length of query: 464
Effective length of database: 70736236
Effective search space: 5871107588
Effective search space used: 5871107588
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 64 (29.3 bits)