Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168944794-32374-151655619888.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig308 Length=494
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|74229677|gb|ABA00453.1| cytoplasmic Cu/ZnSOD [Gossypium hirsu 286 2e-77 gi|95106179|gb|ABF48717.1| cytoplasmic Cu/Zn-superoxide dismutas 281 8e-76 gi|4102861|gb|AAD01605.1| copper/zinc-superoxide dismutase [Popu 281 8e-76 gi|38228697|emb|CAE54085.1| superoxide dismutase [Fagus sylvatic 279 3e-75 gi|4102859|gb|AAD01604.1| cytoplasmic superoxide dismutase 1 [Po 279 4e-75 gi|134616|sp|P27082|SODC_NICPL Superoxide dismutase [Cu-Zn] >... 277 2e-74 gi|50540929|gb|AAT77951.1| copper/zinc superoxide dismutase [Man 275 5e-74 gi|586004|sp|Q07796|SODC_IPOBA Superoxide dismutase [Cu-Zn] >... 274 1e-73 gi|5726592|gb|AAD48484.1|AF170297_1 copper/zinc-superoxide dismu 274 1e-73 gi|3334334|sp|P93258|SODC1_MESCR Superoxide dismutase [Cu-Zn]... 272 4e-73 gi|12230565|sp|O49073|SODC_PAUKA Superoxide dismutase [Cu-Zn]... 271 7e-73 gi|13274150|emb|CAC33845.1| putative cytosolic CuZn-superoxid... 271 9e-73 gi|53748479|emb|CAH59422.1| copper-zinc superoxide dismutase [Pl 271 9e-73 gi|3915000|sp|O22373|SODC_CAPAN Superoxide dismutase [Cu-Zn] ... 271 9e-73 gi|39840779|emb|CAD21706.2| Cu /Zn super-oxide dismutase [Olea e 270 1e-72 gi|12230571|sp|O65768|SODC_CARPA Superoxide dismutase [Cu-Zn]... 270 1e-72 gi|49615353|gb|AAT66935.1| superoxide dismutase [Malus xiaojinen 269 3e-72 gi|3334337|sp|Q43779|SODC2_LYCES Superoxide dismutase [Cu-Zn]... 269 4e-72 gi|134628|sp|P22233|SODC_SPIOL Superoxide dismutase [Cu-Zn] >... 268 7e-72 gi|13431904|sp|Q9SQL5|SODC_ANACO Superoxide dismutase [Cu-Zn]... 268 7e-72 gi|95100501|gb|ABF51006.1| Cu-Zn superoxide dismutase [Arachis h 268 9e-72 gi|71040665|gb|AAZ20281.1| Cu-Zn superoxide dismutase [Arachis h 268 9e-72 gi|134597|sp|P23345|SODC4_MAIZE Superoxide dismutase [Cu-Zn] ... 268 9e-72 gi|92875787|gb|ABE83655.1| Superoxide dismutase, copper/zinc bin 267 1e-71 gi|538213|gb|AAA88196.1| cytosolic copper/zinc-superoxide dis... 266 4e-71 gi|33340236|gb|AAQ14591.1| copper/zinc superoxide dismutase [Cit 265 5e-71 gi|19172405|gb|AAL85888.1|AF479059_1 copper/zinc superoxide dism 265 5e-71 gi|134612|sp|P14830|SODC1_LYCES Superoxide dismutase [Cu-Zn] ... 265 6e-71 gi|90186542|gb|ABD91536.1| Sod2 [Malus xiaojinensis] 265 8e-71 gi|12744890|gb|AAK06837.1|AF328859_1 Cu-Zn superoxide dismutase 265 8e-71 gi|134598|sp|P23346|SODC5_MAIZE Superoxide dismutase [Cu-Zn] 4AP 265 8e-71 gi|56549631|gb|AAV97749.1| CuZn superoxide dismutase [Codonopsis 263 2e-70 gi|115473931|ref|NP_001060564.1| Os07g0665200 [Oryza sativa (... 263 2e-70 gi|17385628|dbj|BAB78597.1| copper/zinc superoxide dismutase [Br 263 2e-70 gi|32441511|gb|AAP81872.1| cytosolic CuZn-superoxide dismutas... 262 4e-70 gi|47117142|sp|Q7M1R5|SODC_SOYBN Superoxide dismutase [Cu-Zn] 262 5e-70 gi|108708142|gb|ABF95937.1| Superoxide dismutase 1, putative,... 261 9e-70 gi|13445918|gb|AAK26435.1|AF354748_1 copper-zinc superoxide dism 261 9e-70 gi|58615985|gb|AAW80431.1| copper-zinc superoxide dismutase [... 261 9e-70 gi|115453035|ref|NP_001050118.1| Os03g0351500 [Oryza sativa (... 261 9e-70 gi|58616005|gb|AAW80441.1| copper-zinc superoxide dismutase [Nel 261 1e-69 gi|58615999|gb|AAW80438.1| copper-zinc superoxide dismutase [Nel 261 1e-69 gi|3860329|emb|CAA10132.1| superoxide dismutase [Cicer arieti... 260 2e-69 gi|2305111|gb|AAD05576.1| Cu/Zn superoxide dismutase [Raphanus s 260 2e-69 gi|3914998|sp|O04996|SODC_SOLCS Superoxide dismutase [Cu-Zn] ... 260 2e-69 gi|12230567|sp|O65174|SODC_ZANAE Superoxide dismutase [Cu-Zn]... 260 2e-69 gi|538430|gb|AAA33917.1| superoxide dismutase 259 3e-69 gi|15223944|ref|NP_172360.1| CSD1; copper, zinc superoxide di... 259 4e-69 gi|1885354|gb|AAB49913.1| superoxide dismutase 4A >gi|6018746... 258 1e-68 gi|12230586|sp|Q42611|SODC1_BRAJU Superoxide dismutase [Cu-Zn... 258 1e-68 gi|68342450|gb|AAY90123.1| copper/zinc superoxide dismutase [Rhe 256 3e-68 gi|58616003|gb|AAW80440.1| copper-zinc superoxide dismutase [Nel 256 3e-68 gi|50978416|emb|CAH06454.1| Cu/Zn superoxide dismutase [Helianth 256 4e-68 gi|134613|sp|P11428|SODC2_MAIZE Superoxide dismutase [Cu-Zn] ... 255 5e-68 gi|12230561|sp|O22668|SODC_PANGI Superoxide dismutase [Cu-Zn]... 255 6e-68 gi|13751866|gb|AAK38603.1|AF355460_1 Cu/Zn-superoxide dismutase 254 8e-68 gi|9802567|gb|AAF99769.1|AC003981_19 F22O13.32 [Arabidopsis thal 254 8e-68 gi|401108|sp|Q02610|SODC_PEA Superoxide dismutase [Cu-Zn] >gi... 254 1e-67 gi|122064575|sp|P09678|SODC_BRAOC Superoxide dismutase [Cu-Zn] 253 2e-67 gi|3288850|gb|AAC25568.1| cytosolic Cu/Zn superoxide dismutas... 253 2e-67 gi|63259317|gb|AAY40317.1| Cu/Zn superoxide dismutase [Brassi... 252 5e-67 gi|134621|sp|P24669|SODC_PINSY Superoxide dismutase [Cu-Zn] >... 251 7e-67 gi|24421235|gb|AAN60796.1| superoxide dismutase [Brassica juncea 251 9e-67 gi|90823174|gb|ABE01089.1| putative cytosolic copper/zinc sup... 250 2e-66 gi|12230587|sp|Q42612|SODC2_BRAJU Superoxide dismutase [Cu-Zn... 249 3e-66 gi|27449246|gb|AAO14117.1|AF457209_1 Cu/Zn superoxide dismutase 246 3e-65 gi|51594295|gb|AAU08173.1| Cu/Zn superoxide dismutase [Camellia 243 3e-64 gi|73665955|gb|AAZ79665.1| putative copper/zinc-superoxide dismu 239 3e-63 gi|111434271|gb|ABH10014.1| Cu/Zn superoxide dismutase [Eucalypt 239 5e-63 gi|22296339|dbj|BAC10110.1| copper/zinc-superoxide dismutase ... 229 5e-60 gi|6723476|emb|CAB66335.1| copper/zinc-superoxide dismutase [Bet 228 8e-60 gi|121292294|gb|ABM53666.1| copper/zinc superoxide dismutase [Eu 227 1e-59 gi|1574938|gb|AAB49912.1| superoxide dismutase 4 226 2e-59 gi|13374180|emb|CAC34448.1| superoxide dismutase [Pinus sylvestr 225 7e-59 gi|3786214|emb|CAA05633.1| high pI CuZn-superoxide dismutase [Pi 219 3e-57 gi|13274154|emb|CAC33847.1| putative CuZn-superoxide dismutas... 219 3e-57 gi|15131679|emb|CAC33846.2| putative CuZn-superoxide dismutas... 218 9e-57 gi|134686|sp|P07505|SODCP_SPIOL Superoxide dismutase [Cu-Zn],... 210 2e-54 gi|494611|pdb|1SRD|A Chain A, Cu,Zn Superoxide Dismutase (E.C... 210 2e-54 gi|29466960|dbj|BAC66947.1| chloroplastic copper/zinc superox... 210 2e-54 gi|3914999|sp|O04997|SODCP_SOLCS Superoxide dismutase [Cu-Zn]... 207 2e-53 gi|92881794|gb|ABE86410.1| Superoxide dismutase, copper/zinc bin 206 3e-53 gi|3334333|sp|O49044|SODC2_MESCR Superoxide dismutase [Cu-Zn]... 206 4e-53 gi|1572627|gb|AAB67991.1| Cu/Zn superoxide dismutase [Triticum a 205 8e-53 gi|50831038|emb|CAH06449.1| Cu/Zn superoxide dismutase precursor 204 1e-52 gi|134684|sp|P10792|SODCP_PETHY Superoxide dismutase [Cu-Zn],... 204 2e-52 gi|2897804|dbj|BAA24919.1| CuZn-superoxide dismutase [Marchantia 203 3e-52 gi|5689611|emb|CAB51840.1| copper/zinc superoxide dismutase [Ara 202 4e-52 gi|58615987|gb|AAW80432.1| copper-zinc superoxide dismutase [Nel 202 6e-52 gi|77744381|gb|ABB02179.1| copper-zinc superoxide dismutase [Nel 202 6e-52 gi|14326463|gb|AAK60277.1|AF385581_1 copper/zinc superoxide d... 201 8e-52 gi|13274148|emb|CAC33844.1| putative CuZn-superoxide dismutas... 201 8e-52 gi|58615995|gb|AAW80436.1| copper-zinc superoxide dismutase [Nel 201 8e-52 gi|1568639|gb|AAB67990.1| Cu/Zn superoxide dismutase [Triticum a 201 8e-52 gi|3273755|gb|AAC24833.1| copper/zinc superoxide dismutase [Arab 201 8e-52 gi|15238738|ref|NP_197311.1| CSD3 (COPPER/ZINC SUPEROXIDE DIS... 201 8e-52 gi|42408425|dbj|BAD09607.1| putative superoxide dismutase [Cu... 201 1e-51 gi|115477837|ref|NP_001062514.1| Os08g0561700 [Oryza sativa (... 201 1e-51 gi|119351383|gb|ABL63518.1| chloroplast Cu/Zn superoxide dismuta 201 1e-51 gi|74229679|gb|ABA00454.1| chloroplast Cu/ZnSOD [Gossypium hirsu 201 1e-51
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 307 Number of extensions: 5 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 494 Length of database: 101054579 Length adjustment: 104 Effective length of query: 390 Effective length of database: 71586283 Effective search space: 4295176980 Effective search space used: 4295176980 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)