Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168944829-3104-5470990327.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig310 Length=515
Score E Sequences producing significant alignments: (Bits) Value gi|34539778|gb|AAQ74768.1| dehydrin [Brassica napus] >gi|3754... 72.4 8e-13 gi|1706562|sp|Q07322|ECP40_DAUCA Embryogenic cell protein 40 ... 71.6 1e-12 gi|118575|sp|P21298|DHLE_RAPSA Late embryogenesis abundant pr... 67.0 4e-11 gi|92870335|gb|ABE79652.1| Dehydrin [Medicago truncatula] 64.7 2e-10 gi|51572266|gb|AAU06814.1| dehydrin 1 [Quercus robur] 63.5 4e-10 gi|2270990|gb|AAB71225.1| dehydrin [Glycine max] 62.4 9e-10 gi|84798481|gb|ABC67157.1| DH2 dehydrin [Coffea canephora] 62.0 1e-09 gi|84314122|gb|ABC55673.1| dehydrin DH2b [Coffea canephora] 62.0 1e-09 gi|84314120|gb|ABC55672.1| dehydrin DH2a [Coffea canephora] 62.0 1e-09 gi|21593864|gb|AAM65831.1| putative dehydrin [Arabidopsis thalia 59.3 7e-09 gi|15226568|ref|NP_179744.1| unknown protein [Arabidopsis tha... 59.3 7e-09 gi|15234960|ref|NP_195624.1| unknown protein [Arabidopsis tha... 57.8 2e-08 gi|94962325|gb|ABF48478.1| dehydrin 5 [Panax ginseng] 47.8 2e-05 gi|19032424|gb|AAL83428.1|AF345990_1 44 kDa dehydrin-like protei 47.0 4e-05 gi|19032422|gb|AAL83427.1|AF345989_1 48 kDa dehydrin-like protei 46.2 6e-05 gi|27526464|emb|CAC80719.1| putative dehydrin [Helianthus annuus 45.4 1e-04 gi|46020012|dbj|BAD13498.1| dehydrin [Nicotiana tabacum] 45.1 1e-04 gi|121488863|emb|CAJ19697.1| dehydrin [Helianthus annuus] 44.7 2e-04 gi|57506540|dbj|BAD86644.1| dehydrin protein [Daucus carota] 44.7 2e-04 gi|40643329|emb|CAD27922.1| putative dehydrin [Helianthus annuus 44.7 2e-04 gi|12053703|emb|CAC20241.1| putative dehydrin [Helianthus annuus 44.7 2e-04 gi|12053697|emb|CAC20238.1| putative dehydrin [Helianthus annuus 44.7 2e-04 gi|12053693|emb|CAC20236.1| putative dehydrin [Helianthus annuus 44.7 2e-04 gi|12053701|emb|CAC20240.1| putative dehydrin [Helianthus annuus 44.7 2e-04 gi|2624085|emb|CAA05713.1| dehydrin-like protein [Helianthus ann 44.7 2e-04 gi|3646020|emb|CAA09421.1| dehydrin-like protein [Helianthus ann 44.7 2e-04 gi|12053707|emb|CAC20243.1| putative dehydrin [Helianthus annuus 44.7 2e-04 gi|12053705|emb|CAC20242.1| putative dehydrin [Helianthus annuus 44.7 2e-04 gi|12053699|emb|CAC20239.1| putative dehydrin [Helianthus annuus 44.7 2e-04 gi|12053695|emb|CAC20237.1| putative dehydrin [Helianthus annuus 44.7 2e-04 gi|1050911|emb|CAA63339.1| unnamed protein product [Helianthus a 44.7 2e-04 gi|84314116|gb|ABC55670.1| dehydrin DH1a [Coffea canephora] 44.3 2e-04 gi|40643327|emb|CAD27921.1| putative dehydrin [Helianthus annuus 43.9 3e-04 gi|1438521|emb|CAA58576.1| dhn1 [Solanum tuberosum] 43.9 3e-04 gi|27526460|emb|CAC80712.1| putative dehydrin [Helianthus petiol 43.9 3e-04 gi|2689251|emb|CAA75798.1| Dhn1 [Solanum commersonii] 43.9 3e-04 gi|27526458|emb|CAC80711.1| putative dehydrin [Helianthus petiol 43.9 3e-04 gi|1438518|emb|CAA58575.1| dhn1 [Solanum commersonii] 43.9 3e-04 gi|84314118|gb|ABC55671.1| dehydrin DH1b [Coffea canephora] 43.1 5e-04 gi|6017948|gb|AAF01699.1|AF181461_1 dehydrin; DHN11 [Hordeum ... 41.6 0.002 gi|27526446|emb|CAC80706.1| putative dehydrin [Helianthus hirsut 41.2 0.002 gi|27526452|emb|CAC80714.1| putative dehydrin [Helianthus tubero 41.2 0.002 gi|18073228|emb|CAC80715.1| putative dehydrin [Helianthus praeco 41.2 0.002 gi|19032426|gb|AAL83429.1|AF345991_1 25 kDa dehydrin-like protei 40.8 0.003 gi|14588999|emb|CAC43181.1| putative dehydrin [Helianthus ciliar 40.8 0.003 gi|19032420|gb|AAL83426.1|AF345988_1 60 kDa dehydrin-like protei 40.4 0.004 gi|27526442|emb|CAC80642.1| putative dehydrin [Helianthus debili 40.4 0.004 gi|27526450|emb|CAC80708.1| putative dehydrin [Helianthus niveus 40.4 0.004 gi|18073230|emb|CAC80716.1| putative dehydrin [Helianthus praeco 40.4 0.004 gi|27526440|emb|CAC80641.1| putative dehydrin [Helianthus debili 40.4 0.004 gi|1928882|gb|AAB51381.1| dehydrin 3 [Pisum sativum] 40.0 0.005 gi|29603157|emb|CAD87733.2| dehydrin [Betula pubescens] 40.0 0.005 gi|27526444|emb|CAC80643.1| putative dehydrin [Helianthus debili 40.0 0.005 gi|18076154|emb|CAC80717.1| putative dehydrin [Tithonia rotundif 40.0 0.005 gi|27526438|emb|CAC80636.1| putative dehydrin [Helianthus annuus 39.7 0.006 gi|27526448|emb|CAC80707.1| putative dehydrin [Helianthus mollis 39.7 0.006 gi|27526454|emb|CAC80709.1| putative dehyidrin [Helianthus maxim 39.7 0.006 gi|118588|sp|P28641|DHN3_PEA Dehydrin DHN3 >gi|20709|emb|CAA4... 39.3 0.008 gi|27526462|emb|CAC80713.1| putative dehydrin [Helianthus praeco 38.1 0.017 gi|115439431|ref|NP_001043995.1| Os01g0702500 [Oryza sativa (... 38.1 0.017 gi|20320|emb|CAA40604.1| rab25 product [Oryza sativa (japonica c 38.1 0.017 gi|1928880|gb|AAB51380.1| dehydrin 2 [Pisum sativum] 37.4 0.030 gi|118586|sp|P28639|DHN1_PEA Dehydrin DHN1 >gi|20705|emb|CAA4... 37.4 0.030 gi|27526456|emb|CAC80710.1| putative dehydrin [Helianthus neglec 37.4 0.030 gi|94962329|gb|ABF48480.1| dehydrin 7 [Panax ginseng] 36.6 0.051 gi|43429923|gb|AAS46614.1| dehydrin 2 [Prunus persica] 36.2 0.066 gi|5738195|gb|AAD50291.1|AF172263_1 abscisic acid response prote 36.2 0.066 gi|6358640|gb|AAF07274.1|AF159804_1 dehydrin [Vigna unguiculata] 36.2 0.066 gi|7141247|gb|AAF37268.1|AF220407_1 dehydrin-like protein [Vitis 36.2 0.066 gi|57903608|gb|AAW58105.1| dehydrin 1a [Vitis riparia] 36.2 0.066 gi|1854447|dbj|BAA12162.1| CPRD22 protein [Vigna unguiculata] 36.2 0.066 gi|118587|sp|P28640|DHN2_PEA Dehydrin DHN2 >gi|20707|emb|CAA4... 36.2 0.066 gi|110832253|gb|ABH01188.1| dehydrin [Ammopiptanthus mongolicus] 35.8 0.087 gi|54645909|gb|AAV36560.1| dehydrin [Vitis vinifera] >gi|5790... 35.8 0.087 gi|57903611|gb|AAW58106.1| dehydrin 1a [Vitis vinifera] 35.8 0.087 gi|166570|gb|AAA32722.1| glycine rich protein [Arabidopsis thali 35.0 0.15 gi|79332705|ref|NP_001032162.1| RAB18 (RESPONSIVE TO ABA 18) [Ar 35.0 0.15 gi|15239373|ref|NP_201441.1| RAB18 (RESPONSIVE TO ABA 18) [Ar... 35.0 0.15 gi|119709430|emb|CAM06618.1| dehydrin [Glycine max] >gi|12053... 34.7 0.19 gi|33303618|gb|AAQ02338.1| lea protein [Glycine max] 34.7 0.19 gi|170020|gb|AAA33990.1| maturation protein >gi|170022|gb|AAA... 34.7 0.19 gi|37495453|emb|CAE47769.1| dehydrin [Glycine max] 34.7 0.19 gi|37495457|emb|CAE47771.1| dehydrin [Glycine max] 34.7 0.19 gi|94962317|gb|ABF48474.1| dehydrin 1 [Panax ginseng] 33.5 0.43 gi|167332|gb|AAA33058.1| dehydrin 33.5 0.43 gi|170024|gb|AAA33992.1| maturation-associated protein 33.5 0.43 gi|497417|gb|AAA18834.1| dehydrin-like protein 33.5 0.43 gi|47155382|dbj|BAD18926.1| dehydrin 1 [Codonopsis lanceolata] 33.5 0.43 gi|37495451|emb|CAE47768.1| dehydrin [Glycine max] 33.5 0.43 gi|37495455|emb|CAE47770.1| dehydrin [Glycine max] 33.5 0.43 gi|167334|gb|AAA33059.1| dehydrin >gi|384328|prf||1905415A Lea3 33.5 0.43 gi|118478|sp|P09442|DH11_GOSHI Late embryogenesis abundant pr... 33.5 0.43 gi|26245734|gb|AAN77521.1| dehydrin 1 [Cicer pinnatifidum] 33.1 0.56 gi|13940496|gb|AAK50392.1|AF318580_1 putative transcription fact 30.4 3.6 gi|20197196|gb|AAM14967.1| hypothetical protein [Arabidopsis tha 29.3 8.1 gi|20197390|gb|AAM15056.1| hypothetical protein [Arabidopsis tha 29.3 8.1 gi|15227269|ref|NP_180521.1| unknown protein [Arabidopsis thalia 29.3 8.1
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 292 Number of extensions: 5 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 515 Length of database: 101054579 Length adjustment: 105 Effective length of query: 410 Effective length of database: 71302934 Effective search space: 4705993644 Effective search space used: 4705993644 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)