Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168944933-10167-185656922140.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig315 Length=567
Score E Sequences producing significant alignments: (Bits) Value gi|15240516|ref|NP_199772.1| unknown protein [Arabidopsis tha... 132 8e-31 gi|21536524|gb|AAM60856.1| unknown [Arabidopsis thaliana] 131 2e-30 gi|92876153|gb|ABE83880.1| Cyclin-like F-box; F-box protein i... 54.3 3e-07 gi|92867921|gb|ABE78040.1| Peptidase S26A, signal peptidase I... 51.6 2e-06 gi|92878466|gb|ABE85070.1| Cyclin-like F-box [Medicago truncatul 51.2 2e-06 gi|87241261|gb|ABD33119.1| F-box associated, putative [Medicago 50.4 4e-06 gi|115479445|ref|NP_001063316.1| Os09g0448100 [Oryza sativa (... 49.3 9e-06 gi|92867780|gb|ABE77917.1| Cyclin-like F-box; F-box protein i... 49.3 9e-06 gi|92872206|gb|ABE80938.1| Cyclin-like F-box; F-box protein i... 48.5 2e-05 gi|115483508|ref|NP_001065424.1| Os10g0566300 [Oryza sativa (... 48.5 2e-05 gi|92887344|gb|ABE88830.1| Cyclin-like F-box; F-box protein i... 48.1 2e-05 gi|92876154|gb|ABE83881.1| Cyclin-like F-box; F-box protein i... 48.1 2e-05 gi|92870889|gb|ABE80112.1| Cyclin-like F-box [Medicago truncatul 48.1 2e-05 gi|108862236|gb|ABA95877.2| F-box protein interaction domain ... 48.1 2e-05 gi|115487496|ref|NP_001066235.1| Os12g0164300 [Oryza sativa (... 48.1 2e-05 gi|51535861|dbj|BAD37944.1| hypothetical protein [Oryza sativ... 48.1 2e-05 gi|48717056|dbj|BAD23745.1| hypothetical protein [Oryza sativa ( 48.1 2e-05 gi|92873389|gb|ABE81853.1| Cyclin-like F-box; F-box protein i... 47.8 3e-05 gi|15229009|ref|NP_188353.1| unknown protein [Arabidopsis thalia 47.8 3e-05 gi|11994544|dbj|BAB02731.1| unnamed protein product [Arabidopsis 47.8 3e-05 gi|92871021|gb|ABE80166.1| Cyclin-like F-box [Medicago truncatul 47.4 4e-05 gi|92891008|gb|ABE90596.1| Cyclin-like F-box; F-box protein i... 47.0 5e-05 gi|92872021|gb|ABE80863.1| Cyclin-like F-box; F-box protein i... 47.0 5e-05 gi|115479765|ref|NP_001063476.1| Os09g0479100 [Oryza sativa (... 47.0 5e-05 gi|92876155|gb|ABE83882.1| Cyclin-like F-box; F-box protein i... 46.6 6e-05 gi|92881836|gb|ABE86418.1| Cyclin-like F-box; F-box protein i... 46.2 8e-05 gi|92874133|gb|ABE82445.1| Cyclin-like F-box; F-box protein i... 46.2 8e-05 gi|92872707|gb|ABE81276.1| Cyclin-like F-box; F-box protein i... 46.2 8e-05 gi|92871022|gb|ABE80167.1| Peptidase C2, calpain; Cyclin-like... 46.2 8e-05 gi|92876145|gb|ABE83872.1| Cyclin-like F-box; F-box protein i... 45.8 1e-04 gi|92867918|gb|ABE78037.1| Peptidase S26A, signal peptidase I... 45.8 1e-04 gi|92878464|gb|ABE85068.1| Cyclin-like F-box; F-box protein i... 45.4 1e-04 gi|15223664|ref|NP_175500.1| unknown protein [Arabidopsis tha... 45.4 1e-04 gi|15237208|ref|NP_200073.1| unknown protein [Arabidopsis tha... 45.4 1e-04 gi|38347473|emb|CAE05293.2| OSJNBa0084N21.11 [Oryza sativa (japo 45.1 2e-04 gi|87241460|gb|ABD33318.1| Cyclin-like F-box [Medicago truncatul 45.1 2e-04 gi|115441927|ref|NP_001045243.1| Os01g0923900 [Oryza sativa (... 44.7 2e-04 gi|92876146|gb|ABE83873.1| Cyclin-like F-box; F-box protein i... 44.7 2e-04 gi|92876151|gb|ABE83878.1| Cyclin-like F-box; F-box protein i... 44.7 2e-04 gi|57900200|dbj|BAD88307.1| putative fimbriata [Oryza sativa (ja 44.7 2e-04 gi|115457228|ref|NP_001052214.1| Os04g0195100 [Oryza sativa (... 44.7 2e-04 gi|55773638|dbj|BAD72177.1| hypothetical protein [Oryza sativa ( 44.7 2e-04 gi|55773640|dbj|BAD72179.1| hypothetical protein [Oryza sativa ( 44.7 2e-04 gi|92876148|gb|ABE83875.1| Cyclin-like F-box; F-box protein i... 44.3 3e-04 gi|9755384|gb|AAF98191.1|AC000107_14 F17F8.21 [Arabidopsis thali 44.3 3e-04 gi|15219833|ref|NP_176884.1| unknown protein [Arabidopsis thalia 44.3 3e-04 gi|15221562|ref|NP_174377.1| unknown protein [Arabidopsis thalia 44.3 3e-04 gi|41052601|dbj|BAD07993.1| hypothetical protein [Oryza sativa ( 44.3 3e-04 gi|110289599|gb|ABG66269.1| F-box domain containing protein [... 43.9 4e-04 gi|92897514|gb|ABE93710.1| F-box protein interaction domain [Med 43.9 4e-04 gi|92878473|gb|ABE85077.1| Cyclin-like F-box; F-box protein i... 43.9 4e-04 gi|115471347|ref|NP_001059272.1| Os07g0242400 [Oryza sativa (... 43.9 4e-04 gi|92875117|gb|ABE83257.1| Cyclin-like F-box; Serine/threonin... 43.5 5e-04 gi|4586069|gb|AAD25686.1| hypothetical protein [Arabidopsis thal 43.5 5e-04 gi|15226859|ref|NP_178312.1| unknown protein [Arabidopsis tha... 43.5 5e-04 gi|86439730|emb|CAJ19345.1| FIMBRIATA-like protein [Triticum aes 43.5 5e-04 gi|55773643|dbj|BAD72182.1| hypothetical protein [Oryza sativa ( 43.5 5e-04 gi|115476200|ref|NP_001061696.1| Os08g0382800 [Oryza sativa (... 43.1 7e-04 gi|15231179|ref|NP_190800.1| unknown protein [Arabidopsis tha... 43.1 7e-04 gi|115481832|ref|NP_001064509.1| Os10g0391200 [Oryza sativa (... 43.1 7e-04 gi|55773639|dbj|BAD72178.1| hypothetical protein [Oryza sativa ( 43.1 7e-04 gi|15221604|ref|NP_174394.1| unknown protein [Arabidopsis tha... 42.7 9e-04 gi|115477310|ref|NP_001062251.1| Os08g0518300 [Oryza sativa (... 42.4 0.001 gi|92867907|gb|ABE78026.1| Cyclin-like F-box; F-box protein i... 42.4 0.001 gi|53793718|gb|AAU93581.1| Putative F-box protein, identical [So 42.4 0.001 gi|15234860|ref|NP_195598.1| unknown protein [Arabidopsis tha... 42.4 0.001 gi|15220964|ref|NP_175213.1| unknown protein [Arabidopsis tha... 42.4 0.001 gi|92869603|gb|ABE79225.1| Cyclin-like F-box; F-box protein i... 42.0 0.001 gi|92867906|gb|ABE78025.1| Cyclin-like F-box [Medicago truncatul 42.0 0.001 gi|47900694|gb|AAT39293.1| Putative F-box-like protein, identica 41.6 0.002 gi|18377843|gb|AAL67108.1| AT5g42350/MDH9_4 [Arabidopsis thalian 41.6 0.002 gi|115436660|ref|NP_001043088.1| Os01g0380800 [Oryza sativa (... 41.6 0.002 gi|21555134|gb|AAM63784.1| unknown [Arabidopsis thaliana] 41.6 0.002 gi|15231962|ref|NP_187487.1| unknown protein [Arabidopsis tha... 41.6 0.002 gi|55773646|dbj|BAD72185.1| hypothetical protein [Oryza sativa ( 41.6 0.002 gi|15238937|ref|NP_199051.1| unknown protein [Arabidopsis tha... 41.6 0.002 gi|15238934|ref|NP_199050.1| unknown protein [Arabidopsis tha... 41.6 0.002 gi|108708345|gb|ABF96140.1| F-box domain containing protein [... 41.2 0.003 gi|90657537|gb|ABD96837.1| hypothetical protein [Cleome spinosa] 41.2 0.003 gi|92867910|gb|ABE78029.1| Cyclin-like F-box; F-box protein i... 41.2 0.003 gi|47824945|gb|AAT38719.1| Putative F-Box protein, identical [So 41.2 0.003 gi|38347475|emb|CAE05295.2| OSJNBa0084N21.13 [Oryza sativa (japo 41.2 0.003 gi|15242370|ref|NP_197075.1| unknown protein [Arabidopsis tha... 41.2 0.003 gi|4926821|gb|AAD32931.1|AC004135_6 T17H7.6 [Arabidopsis thalian 41.2 0.003 gi|15229067|ref|NP_188380.1| unknown protein [Arabidopsis thalia 41.2 0.003 gi|15221502|ref|NP_174365.1| unknown protein [Arabidopsis thalia 41.2 0.003 gi|9294140|dbj|BAB02042.1| unnamed protein product [Arabidopsis 41.2 0.003 gi|117939139|dbj|BAF36718.1| S locus F-box protein with the l... 40.8 0.003 gi|113205268|gb|ABI34319.1| Putative F-box protein, identical [S 40.8 0.003 gi|92896418|gb|ABE93191.1| Cyclin-like F-box [Medicago truncatul 40.8 0.003 gi|47824921|gb|AAT38697.1| Putative F-box protein, identical [So 40.8 0.003 gi|12039340|gb|AAG46127.1|AC082644_9 hypothetical protein [Or... 40.8 0.003 gi|41052571|dbj|BAD07753.1| hypothetical protein [Oryza sativa ( 40.8 0.003 gi|15233315|ref|NP_188242.1| unknown protein [Arabidopsis tha... 40.8 0.003 gi|92869826|gb|ABE79316.1| Cyclin-like F-box; F-box protein i... 40.4 0.004 gi|92869314|gb|ABE79116.1| Cyclin-like F-box; Galactose oxida... 40.4 0.004 gi|92869313|gb|ABE79115.1| Cyclin-like F-box; F-box protein i... 40.4 0.004 gi|15220158|ref|NP_175163.1| unknown protein [Arabidopsis thalia 40.4 0.004 gi|18401609|ref|NP_566586.1| unknown protein [Arabidopsis tha... 40.4 0.004 gi|15229011|ref|NP_188354.1| unknown protein [Arabidopsis tha... 40.4 0.004
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 479 Number of extensions: 16 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 567 Length of database: 101054579 Length adjustment: 107 Effective length of query: 460 Effective length of database: 70736236 Effective search space: 5800371352 Effective search space used: 5800371352 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)