Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168944949-11710-100811437904.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig316 Length=487
Score E Sequences producing significant alignments: (Bits) Value gi|56961766|gb|AAW31852.1| actin [Vitis vinifera] 255 5e-68 gi|38259662|gb|AAR15174.1| actin [Ricinus communis] 255 5e-68 gi|5230841|gb|AAD41039.1|AF112538_1 actin [Malva pusilla] 255 5e-68 gi|23955912|gb|AAN40685.1| actin [Stevia rebaudiana] 255 5e-68 gi|32186906|gb|AAP73457.1| actin [Gossypium hirsutum] 255 5e-68 gi|32186894|gb|AAP73451.1| actin [Gossypium hirsutum] 255 5e-68 gi|32186902|gb|AAP73455.1| actin [Gossypium hirsutum] 255 5e-68 gi|9082317|gb|AAF82805.1| actin [Helianthus annuus] 255 5e-68 gi|92876001|gb|ABE83769.1| Actin/actin-like [Medicago truncatula 254 8e-68 gi|34541966|gb|AAQ74875.1| actin [Trifolium pratense] 254 8e-68 gi|6683504|dbj|BAA89214.1| actin isoform B [Mimosa pudica] 254 8e-68 gi|32186916|gb|AAP73462.1| actin [Gossypium hirsutum] 254 1e-67 gi|32186904|gb|AAP73456.1| actin [Gossypium hirsutum] 254 1e-67 gi|32186892|gb|AAP73450.1| actin [Gossypium hirsutum] 254 1e-67 gi|32186890|gb|AAP73449.1| actin [Gossypium hirsutum] 254 1e-67 gi|32186896|gb|AAP73452.1| actin [Gossypium hirsutum] 254 1e-67 gi|2244734|dbj|BAA21108.1| actin [Gossypium hirsutum] 254 1e-67 gi|56181504|gb|AAV83799.1| putative actin 1 [Chorispora bungeana 253 2e-67 gi|72384439|gb|AAZ67555.1| 52O08_9 [Brassica rapa subsp. pekinen 253 2e-67 gi|58013197|gb|AAW63030.1| actin [Isatis tinctoria] 253 2e-67 gi|32186900|gb|AAP73454.1| actin [Gossypium hirsutum] 253 2e-67 gi|4139264|gb|AAD03741.1| actin [Brassica napus] 253 2e-67 gi|15076949|gb|AAK82991.1|AF285176_1 actin [Musa x paradisiaca] 253 3e-67 gi|32186910|gb|AAP73459.1| actin [Gossypium hirsutum] 253 3e-67 gi|231505|sp|P30173|ACT13_SOLTU Actin-101 >gi|21534|emb|CAA39281 253 3e-67 gi|231504|sp|P30172|ACT12_SOLTU Actin-100 >gi|1345579|emb|CAA392 253 3e-67 gi|32186912|gb|AAP73460.1| actin [Gossypium hirsutum] 252 4e-67 gi|115456443|ref|NP_001051822.1| Os03g0836000 [Oryza sativa (... 252 4e-67 gi|55820068|gb|AAT72934.2| stem cambial region actin protein [Eu 252 5e-67 gi|6103623|gb|AAF03692.1|AF172094_1 actin [Picea rubens] 252 5e-67 gi|62642084|gb|AAX92681.1| actin [Picea abies] 252 5e-67 gi|57118119|gb|AAW34192.1| actin [Linum usitatissimum] 251 7e-67 gi|32186888|gb|AAP73448.1| actin [Gossypium hirsutum] 251 7e-67 gi|50058115|dbj|BAD27408.1| actin [Nicotiana tabacum] 251 7e-67 gi|115487492|ref|NP_001066233.1| Os12g0163700 [Oryza sativa (... 251 9e-67 gi|1531674|gb|AAC49652.1| actin [Striga asiatica] 251 9e-67 gi|77553072|gb|ABA95868.1| Actin-7, putative, expressed [Oryz... 251 9e-67 gi|15242516|ref|NP_196543.1| ACT7 [Arabidopsis thaliana] >gi|... 251 9e-67 gi|7960249|gb|AAF71266.1|AF246716_1 actin-like protein [Phalaeno 251 1e-66 gi|115484337|ref|NP_001065830.1| Os11g0163100 [Oryza sativa (... 251 1e-66 gi|110084293|gb|ABG49392.1| actin 2 [Torenia fournieri] 250 2e-66 gi|7960247|gb|AAF71265.1|AF246715_1 actin-like protein [Phalaeno 250 2e-66 gi|37038130|gb|AAQ88109.1| actin 1 [Physcomitrella patens] 250 2e-66 gi|5726018|gb|AAD48335.1|AF090969_1 actin [Selaginella apoda] 250 2e-66 gi|1531672|gb|AAC49651.1| actin [Striga asiatica] 250 2e-66 gi|81076210|gb|ABB55389.1| actin-like [Solanum tuberosum] 250 2e-66 gi|231503|sp|P30171|ACT11_SOLTU Actin-97 >gi|21544|emb|CAA39280. 250 2e-66 gi|231496|sp|P30167|ACT3_SOLTU Actin-58 >gi|21536|emb|CAA39278.1 250 2e-66 gi|54035683|sp|O81221|ACT_GOSHI Actin >gi|3420239|gb|AAC31886.1| 250 2e-66 gi|115461639|ref|NP_001054419.1| Os05g0106600 [Oryza sativa (... 249 3e-66 gi|9965319|gb|AAG10041.1|AF288226_1 actin [Setaria italica] 249 3e-66 gi|5726016|gb|AAD48334.1|AF090968_1 actin [Selaginella apoda] 249 3e-66 gi|53759189|gb|AAU93346.1| actin [Saccharum officinarum] 249 3e-66 gi|32186898|gb|AAP73453.1| actin [Gossypium hirsutum] 249 3e-66 gi|231495|sp|P30164|ACT1_PEA Actin-1 >gi|20637|emb|CAA47899.1| a 249 3e-66 gi|115454971|ref|NP_001051086.1| Os03g0718100 [Oryza sativa (... 249 3e-66 gi|56181502|gb|AAV83798.1| putative actin 2 [Chorispora bungeana 249 4e-66 gi|461465|sp|Q05214|ACT1_TOBAC Actin >gi|22609|emb|CAA45149.1| a 249 4e-66 gi|15229955|ref|NP_187818.1| ACT11 (ACTIN-11); structural con... 249 4e-66 gi|23092520|gb|AAN08622.1| actin [Phalaenopsis hybrid cultivar] 248 6e-66 gi|231501|sp|P30169|ACT7_SOLTU Actin-75 >gi|21540|emb|CAA39282.1 248 6e-66 gi|33339126|gb|AAQ14245.1|AF246288_1 actin [Musa acuminata] 248 8e-66 gi|6934188|gb|AAF31643.1|AF143208_1 actin [Vigna radiata] 248 8e-66 gi|231499|sp|P30165|ACT2_PEA Actin-2 >gi|20635|emb|CAA48609.1| a 248 8e-66 gi|48527433|gb|AAT45848.1| actine [Elaeis guineensis] 247 1e-65 gi|3746938|gb|AAC64127.1| actin 2 [Anemia phyllitidis] 247 1e-65 gi|9408605|gb|AAF87302.1| actin [Magnolia denudata] 247 1e-65 gi|3746942|gb|AAC64129.1| actin 1 [Psilotum nudum] 247 1e-65 gi|24496452|gb|AAN59956.1| actin [Hordeum vulgare] >gi|585331... 247 1e-65 gi|37038156|gb|AAQ88111.1| actin 5 [Physcomitrella patens] 247 2e-65 gi|37038142|gb|AAQ88110.1| actin 3 [Physcomitrella patens] 247 2e-65 gi|37038170|gb|AAQ88112.1| actin 7 [Physcomitrella patens] 247 2e-65 gi|15289940|dbj|BAB63635.1| putative actin [Oryza sativa (japoni 247 2e-65 gi|7960245|gb|AAF71264.1|AF246714_1 actin-like protein [Phalaeno 247 2e-65 gi|113302|sp|P24902|ACT_PINCO Actin >gi|169374|gb|AAA33775.1| ac 246 2e-65 gi|115482882|ref|NP_001065034.1| Os10g0510000 [Oryza sativa (... 246 2e-65 gi|7211789|gb|AAF40438.1|AF234528_2 actin 1 [Avena nuda] 246 3e-65 gi|3287956|sp|P02580|ACT3_SOYBN Actin-3 246 4e-65 gi|1168322|sp|P30168|ACT6_SOLTU Actin-71 >gi|21538|emb|CAA39279. 246 4e-65 gi|20197249|gb|AAC23632.2| actin 3 [Arabidopsis thaliana] 245 5e-65 gi|5902733|sp|O65315|ACT_COLSC Actin >gi|3127133|gb|AAC16054.1| 245 5e-65 gi|18409908|ref|NP_566988.1| ACT3; structural constituent of ... 245 5e-65 gi|21592948|gb|AAM64898.1| actin 8 [Arabidopsis thaliana] 244 1e-64 gi|32186908|gb|AAP73458.1| actin [Gossypium hirsutum] 244 1e-64 gi|113217|sp|P23343|ACT1_DAUCA Actin-1 244 1e-64 gi|15230191|ref|NP_188508.1| ACT2 (ACTIN 2); structural const... 244 1e-64 gi|71638|pir||ATSY3 actin - soybean >gi|18532|emb|CAA23728.1|... 244 1e-64 gi|15222075|ref|NP_175350.1| ACT8 (ACTIN 8); motor/ protein b... 244 1e-64 gi|59800134|gb|AAX07420.1| actin 2 [Musa acuminata] 243 2e-64 gi|1669389|gb|AAC49523.1| actin 8 243 2e-64 gi|32186914|gb|AAP73461.1| actin [Gossypium hirsutum] 243 2e-64 gi|1666232|gb|AAB18643.1| actin [Pisum sativum] >gi|1724141|g... 243 2e-64 gi|1666228|gb|AAB18641.1| actin [Pisum sativum] >gi|1666230|g... 243 2e-64 gi|166582|gb|AAA32727.1| actin-1 >gi|1145693|gb|AAA98561.1| acti 243 2e-64 gi|115464123|ref|NP_001055661.1| Os05g0438800 [Oryza sativa (... 243 3e-64 gi|18252329|gb|AAL66196.1|AF386514_1 actin [Pyrus communis] 242 4e-64 gi|295885|emb|CAA33874.1| actin [Oryza sativa (indica cultivar-g 242 4e-64 gi|4105262|gb|AAD02328.1| actin [Brassica oleracea] 242 4e-64 gi|1168324|sp|P46258|ACT3_PEA Actin-3 >gi|940813|emb|CAA62028.1| 242 5e-64 gi|21593690|gb|AAM65657.1| actin 4 [Arabidopsis thaliana] 241 1e-63
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 372 Number of extensions: 4 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 487 Length of database: 101054579 Length adjustment: 104 Effective length of query: 383 Effective length of database: 71586283 Effective search space: 4152004414 Effective search space used: 4152004414 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)