Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168944990-15527-22774605768.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig318 Length=542
Score E Sequences producing significant alignments: (Bits) Value gi|33338106|gb|AAQ13675.1|AF181998_1 transcription factor DP1... 306 3e-83 gi|21554147|gb|AAM63227.1| unknown [Arabidopsis thaliana] 282 6e-76 gi|30680032|ref|NP_850757.1| DPB [Arabidopsis thaliana] >gi|1... 280 2e-75 gi|7378623|emb|CAB83299.1| transcription factor-like protein [Ar 270 2e-72 gi|115450779|ref|NP_001048990.1| Os03g0152100 [Oryza sativa (... 269 5e-72 gi|115482194|ref|NP_001064690.1| Os10g0440100 [Oryza sativa (... 238 1e-62 gi|89741408|gb|ABD77591.1| DP1 [Chlamydomonas reinhardtii] 154 2e-37 gi|7413636|emb|CAB85984.1| DP-2 transcription factor-like [Arabi 143 3e-34 gi|22326573|ref|NP_195867.2| DPA; transcription factor [Arabi... 143 3e-34 gi|11877791|emb|CAC19034.1| DP protein [Triticum sp.] 122 1e-27 gi|115439161|ref|NP_001043860.1| Os01g0678700 [Oryza sativa (... 111 1e-24 gi|116060017|emb|CAL56076.1| E2F dimerization partner 1 (IC) [Os 99.4 7e-21 gi|55978014|gb|AAV68607.1| transcription factor Dp [Ostreococcus 99.4 7e-21 gi|15220994|ref|NP_175222.1| E2FC; transcription factor [Arab... 36.6 0.057 gi|11558192|emb|CAC17702.1| transcription factor (E2F) [Chenopod 36.6 0.057 gi|9802604|gb|AAF99806.1|AC012463_23 T2E6.2 [Arabidopsis thalian 36.6 0.057 gi|14149097|dbj|BAB55644.1| E2F-5-like protein AtE2F2 [Arabidops 36.6 0.057 gi|19578317|emb|CAD10634.1| transcription factor E2Ff [Arabidops 36.2 0.074 gi|6094551|gb|AAF03493.1|AC010676_3 hypothetical protein [Arabid 36.2 0.074 gi|22330789|ref|NP_186782.2| DEL3; transcription factor [Arab... 36.2 0.074 gi|18420430|ref|NP_568413.1| E2F1; transcription factor [Arab... 35.4 0.13 gi|11125655|emb|CAC15485.1| E2F-related protein [Arabidopsis tha 35.4 0.13 gi|79328357|ref|NP_001031921.1| E2F1; transcription factor [Arab 35.4 0.13 gi|11022648|dbj|BAB17029.1| transcription factor-like protein [A 35.4 0.13 gi|42569659|ref|NP_565831.3| E2F3 (E2F TRANSCRIPTION FACTOR-3... 35.0 0.17 gi|6328415|dbj|BAA86386.1| transcription factor [Nicotiana tabac 35.0 0.17 gi|116317765|emb|CAH65745.1| OSIGBa0127D24.8 [Oryza sativa (indi 34.7 0.22 gi|17484017|gb|AAL40272.1| UDP-glycosyltransfersase [Jatropha cu 34.7 0.22 gi|5763821|emb|CAB53258.1| E2F protein [Triticum sp.] 34.7 0.22 gi|38345218|emb|CAD39379.2| OSJNBb0021I10.1 [Oryza sativa (ja... 34.7 0.22 gi|13398926|emb|CAC34724.1| E2F-4 protein [Arabidopsis thaliana] 34.3 0.28 gi|42571075|ref|NP_973611.1| E2F3 (E2F TRANSCRIPTION FACTOR-3... 34.3 0.28 gi|115465843|ref|NP_001056521.1| Os05g0596600 [Oryza sativa (... 34.3 0.28 gi|92869654|gb|ABE79270.1| Heat shock protein DnaJ, N-terminal [ 33.9 0.37 gi|27802536|gb|AAO21197.1| E2F [Populus alba] 33.9 0.37 gi|42568619|ref|NP_200618.3| unknown protein [Arabidopsis thalia 33.9 0.37 gi|9759536|dbj|BAB11002.1| unnamed protein product [Arabidopsis 33.9 0.37 gi|116310803|emb|CAH67593.1| OSIGBa0092M08.5 [Oryza sativa (indi 33.5 0.48 gi|115458326|ref|NP_001052763.1| Os04g0416100 [Oryza sativa (... 33.5 0.48 gi|92893590|gb|ABE91816.1| Transcription factor E2F/dimerisat... 33.5 0.48 gi|92874057|gb|ABE82375.1| Transcription factor E2F/dimerisat... 33.5 0.48 gi|92872837|gb|ABE81389.1| Transcription factor E2F/dimerisat... 33.5 0.48 gi|38344033|emb|CAE01525.2| OJ991214_12.14 [Oryza sativa (japoni 33.5 0.48 gi|42571073|ref|NP_973610.1| E2F3 (E2F TRANSCRIPTION FACTOR-3... 33.5 0.48 gi|92870474|gb|ABE79769.1| hypothetical protein MtrDRAFT_AC14... 33.1 0.63 gi|8977833|emb|CAB95727.1| transcription factor E2F [Daucus caro 33.1 0.63 gi|115446539|ref|NP_001047049.1| Os02g0537500 [Oryza sativa (... 32.7 0.82 gi|54291511|dbj|BAD62318.1| hypothetical protein [Oryza sativ... 32.7 0.82 gi|12225043|dbj|BAB20932.1| E2F homolog [Oryza sativa] >gi|50... 32.7 0.82 gi|22086272|gb|AAM90621.1|AF400001_1 E2F-related transcription f 32.3 1.1 gi|26190147|emb|CAD21953.1| putative E2F transcription factor [P 32.3 1.1 gi|115476908|ref|NP_001062050.1| Os08g0478200 [Oryza sativa (... 32.3 1.1 gi|15242176|ref|NP_197000.1| DEL2/E2FD/E2L1; DNA binding / pr... 32.3 1.1 gi|77553720|gb|ABA96516.1| Transcription factor E2F/dimerisat... 32.0 1.4 gi|115487438|ref|NP_001066206.1| Os12g0158800 [Oryza sativa (... 32.0 1.4 gi|12225045|dbj|BAB20933.1| E2F homolog [Oryza sativa] 32.0 1.4 gi|115444823|ref|NP_001046191.1| Os02g0196100 [Oryza sativa (... 31.6 1.8 gi|115463975|ref|NP_001055587.1| Os05g0422400 [Oryza sativa (... 31.2 2.4 gi|89741410|gb|ABD77592.1| E2F1 [Chlamydomonas reinhardtii] 31.2 2.4 gi|27764655|gb|AAO23080.1| hypothetical protein [Oryza sativa... 31.2 2.4 gi|42562111|ref|NP_173147.2| unknown protein [Arabidopsis thalia 31.2 2.4 gi|15228821|ref|NP_191169.1| MRLK (MERISTEMATIC RECEPTOR-LIKE... 30.8 3.1 gi|55978012|gb|AAV68606.1| DP-E2F-like protein [Ostreococcus ... 30.4 4.1 gi|33146466|dbj|BAC79574.1| hypothetical protein [Oryza sativa ( 30.4 4.1 gi|110288982|gb|ABG66037.1| glutathione transferase, putative... 30.0 5.3 gi|108864251|gb|ABA92743.2| retrotransposon protein, putative... 30.0 5.3 gi|92867951|gb|ABE78062.1| Integrase, catalytic region; Zinc ... 30.0 5.3 gi|37718853|gb|AAR01724.1| hypothetical protein [Oryza sativa (j 30.0 5.3 gi|15241913|ref|NP_198228.1| unknown protein [Arabidopsis thalia 30.0 5.3 gi|92887026|gb|ABE88592.1| hypothetical protein MtrDRAFT_AC14... 29.6 6.9 gi|5541722|emb|CAB51063.1| putative protein [Arabidopsis thalian 29.6 6.9 gi|15724288|gb|AAL06537.1|AF412084_1 AT3g11590/F24K9_26 [Arabido 29.6 6.9 gi|30692988|ref|NP_851012.1| DEL1; transcription factor [Arab... 29.6 6.9 gi|18399293|ref|NP_566392.1| unknown protein [Arabidopsis tha... 29.6 6.9 gi|115449427|ref|NP_001048464.1| Os02g0809800 [Oryza sativa (... 29.6 6.9 gi|1076557|pir||S54157 extensin-like protein - cowpea (fragment) 29.6 6.9 gi|22331664|ref|NP_190399.2| DEL1; transcription factor [Arab... 29.6 6.9
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 351 Number of extensions: 4 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 542 Length of database: 101054579 Length adjustment: 106 Effective length of query: 436 Effective length of database: 71019585 Effective search space: 5255449290 Effective search space used: 5255449290 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)