Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168945008-3632-109042744771.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig319 Length=650
Score E Sequences producing significant alignments: (Bits) Value gi|6573769|gb|AAF17689.1|AC009243_16 F28K19.26 [Arabidopsis thal 279 2e-78 gi|42563306|ref|NP_177928.2| catalytic/ intramolecular transf... 279 2e-78 gi|21618275|gb|AAM67325.1| unknown [Arabidopsis thaliana] 278 3e-78 gi|18395083|ref|NP_564161.1| catalytic/ intramolecular transf... 278 3e-78 gi|21539557|gb|AAM53331.1| unknown protein [Arabidopsis thaliana 275 2e-77 gi|115448715|ref|NP_001048137.1| Os02g0751800 [Oryza sativa (... 271 1e-75 gi|51536053|dbj|BAD38179.1| putative phosphoglycerate mutase ... 211 2e-54 gi|26451923|dbj|BAC43054.1| unknown protein [Arabidopsis thal... 140 8e-37 gi|33772159|gb|AAQ54516.1| phosphoglycerate mutase [Malus x dome 37.7 1e-06 gi|15242927|ref|NP_197654.1| catalytic [Arabidopsis thaliana]... 45.8 1e-04 gi|15229783|ref|NP_190621.1| catalytic [Arabidopsis thaliana]... 43.1 9e-04 gi|116056430|emb|CAL52719.1| Phosphoglycerate mutase (ISS) [Ostr 42.4 0.001 gi|9955567|emb|CAC05494.1| phosphoglycerate mutase-like protein 42.4 0.001 gi|15237633|ref|NP_196032.1| catalytic [Arabidopsis thaliana] 42.4 0.001 gi|116060797|emb|CAL57275.1| Low density lipoprotein B-like p... 40.4 0.006 gi|115435550|ref|NP_001042533.1| Os01g0237100 [Oryza sativa (... 40.4 0.006 gi|115484191|ref|NP_001065757.1| Os11g0150100 [Oryza sativa (... 40.4 0.006 gi|115484075|ref|NP_001065699.1| Os11g0138400 [Oryza sativa (... 40.0 0.007 gi|108863974|gb|ABA91368.2| phosphoglycerate mutase family pr... 40.0 0.007 gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [O... 39.3 0.013 gi|77552952|gb|ABA95748.1| phosphoglycerate mutase family pro... 36.6 0.081 gi|115484077|ref|NP_001065700.1| Os11g0138600 [Oryza sativa (... 36.2 0.11 gi|21435776|gb|AAM53961.1|AF515615_1 TSB [Lycopersicon esculentu 34.3 0.40 gi|115462013|ref|NP_001054606.1| Os05g0141700 [Oryza sativa (... 34.3 0.40 gi|38454096|gb|AAR20742.1| At1g08940 [Arabidopsis thaliana] >... 33.1 0.90 gi|15223983|ref|NP_172369.1| catalytic [Arabidopsis thaliana]... 33.1 0.90 gi|116058852|emb|CAL54559.1| FOG: RRM domain (ISS) [Ostreococcus 32.7 1.2 gi|116058958|emb|CAL54665.1| Phosphoglycerate mutase (ISS) [Ostr 32.0 2.0 gi|116055003|emb|CAL57080.1| unnamed protein product [Ostreococc 31.2 3.4 gi|3309583|gb|AAC26113.1| fructose-6-phosphate 2-kinase/fruct... 31.2 3.4 gi|116061864|emb|CAL52582.1| transducin / WD-40 repeat protei... 30.8 4.5 gi|116000540|emb|CAL50220.1| Nicotinic acid phosphoribosyltra... 29.6 9.9
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 420 Number of extensions: 5 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 650 Length of database: 101054579 Length adjustment: 109 Effective length of query: 541 Effective length of database: 70169538 Effective search space: 7508140566 Effective search space used: 7508140566 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 65 (29.6 bits)