Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168930006-27522-88804120861.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig32 Length=388
Score E Sequences producing significant alignments: (Bits) Value gi|89475524|gb|ABD73294.1| ADP-ribosylation factor-like protein 62.4 5e-10 gi|20218819|emb|CAC84494.1| putative ADP-ribosylation factor [Pi 62.4 5e-10 gi|15228723|ref|NP_191788.1| GTP binding [Arabidopsis thalian... 62.4 5e-10 gi|7643794|gb|AAF65512.1| ADP-ribosylation factor [Capsicum a... 62.4 5e-10 gi|77812440|gb|ABB03801.1| ADP ribosylation factor 002 [Daucu... 62.4 5e-10 gi|56713930|gb|AAW23955.1| ARF-like small GTPase 1 [Brassica jun 62.4 5e-10 gi|115464585|ref|NP_001055892.1| Os05g0489600 [Oryza sativa (... 62.4 5e-10 gi|3182919|sp|O23778|ARF1_CATRO ADP-ribosylation factor 1 >gi... 62.4 5e-10 gi|115501471|dbj|BAF34209.1| ADP ribosylation factor [Nicotiana 61.2 1e-09 gi|29028256|gb|AAO62347.1| ARF1-like GTP-binding protein [Gossyp 60.8 1e-09 gi|76160984|gb|ABA40455.1| ARF-like small GTPase-like protein... 60.8 1e-09 gi|25294174|pir||E86368 F5O8.5 protein - Arabidopsis thaliana... 60.8 1e-09 gi|17154685|emb|CAD12855.1| ADP-ribosylation factor [Gossypiu... 60.8 1e-09 gi|39653273|gb|AAR29293.1| ADP-ribosylation factor [Medicago ... 60.5 2e-09 gi|30681825|ref|NP_172533.2| GTP binding [Arabidopsis thalian... 60.5 2e-09 gi|4324967|gb|AAD17207.1| ADP-ribosylation factor [Glycine max] 60.5 2e-09 gi|29124979|gb|AAO63779.1| ADP-ribosylation factor 1 [Populus tr 60.5 2e-09 gi|77999251|gb|ABB16972.1| ADP-ribosylation factor 1-like pro... 60.5 2e-09 gi|76160966|gb|ABA40446.1| unknown [Solanum tuberosum] 60.5 2e-09 gi|115440639|ref|NP_001044599.1| Os01g0813400 [Oryza sativa (... 60.5 2e-09 gi|15226521|ref|NP_182239.1| ARF1 (ADP-RIBOSYLATION FACTOR 1)... 60.5 2e-09 gi|15223164|ref|NP_177206.1| unknown protein [Arabidopsis tha... 60.1 2e-09 gi|1703374|sp|P51821|ARF1_CHLRE ADP-ribosylation factor 1 >gi... 60.1 2e-09 gi|40287462|gb|AAR83845.1| ADP-ribosylation factor [Capsicum ann 59.7 3e-09 gi|92885316|gb|ABE87751.1| Ras GTPase; ARF/SAR superfamily [Medi 59.3 4e-09 gi|37932258|gb|AAP69821.1| ARF [Oryza sativa (japonica cultivar- 59.3 4e-09 gi|115435820|ref|NP_001042668.1| Os01g0265100 [Oryza sativa (... 59.3 4e-09 gi|1703375|sp|P51822|ARF1_DAUCA ADP-ribosylation factor 1 >gi... 59.3 4e-09 gi|11131023|sp|O48649|ARF1_SALBA ADP-ribosylation factor 1 >g... 59.3 4e-09 gi|47026845|gb|AAT08648.1| ADP-ribosylation factor [Hyacinthus o 58.9 5e-09 gi|47026953|gb|AAT08696.1| ADP-ribosylation factor [Hyacinthus o 58.9 5e-09 gi|6573751|gb|AAF17671.1|AC009398_20 F20B24.7 [Arabidopsis thali 58.9 5e-09 gi|20161472|dbj|BAB90396.1| ADP-ribosylation factor [Oryza sa... 58.9 5e-09 gi|11131026|sp|O48920|ARF_VIGUN ADP-ribosylation factor >gi|2... 58.9 5e-09 gi|15241463|ref|NP_196971.1| ATARFA1B; GTP binding [Arabidops... 58.5 7e-09 gi|47026876|gb|AAT08663.1| ADP-ribosylation factor [Hyacinthus o 58.2 9e-09 gi|115471215|ref|NP_001059206.1| Os07g0223100 [Oryza sativa (... 57.4 1e-08 gi|108711708|gb|ABF99503.1| ADP-ribosylation factor, putative... 57.4 1e-08 gi|115456151|ref|NP_001051676.1| Os03g0811900 [Oryza sativa (... 57.4 1e-08 gi|2462736|gb|AAB71955.1| putative ADP-ribolylation factor [Arab 57.4 1e-08 gi|115471217|ref|NP_001059207.1| Os07g0223400 [Oryza sativa (... 57.4 1e-08 gi|82621126|gb|ABB86251.1| ADP-ribosylation factor 1-like [Solan 56.6 3e-08 gi|52548250|gb|AAU82112.1| ADP-ribosylation factor [Triticum aes 56.2 3e-08 gi|1351974|sp|P49076|ARF_MAIZE ADP-ribosylation factor >gi|55... 55.8 4e-08 gi|1703376|sp|P51824|ARF1_SOLTU ADP-ribosylation factor 1 >gi... 55.1 7e-08 gi|116060895|emb|CAL57373.1| unnamed protein product [Ostreococc 54.3 1e-07 gi|82621154|gb|ABB86265.1| ADP-ribosylation factor-like [Solanum 49.3 4e-06 gi|445131|prf||1908434A chilling tolerance-related protein:ISOTY 45.8 4e-05 gi|287395|dbj|BAA01630.1| unnamed protein product [Oryza sati... 45.8 4e-05 gi|116055791|emb|CAL57876.1| GTP-binding ADP-ribosylation fac... 41.6 8e-04 gi|92893756|gb|ABE91892.1| Ras GTPase [Medicago truncatula] 41.6 8e-04 gi|92890621|gb|ABE90431.1| Ras GTPase [Medicago truncatula] 41.6 8e-04 gi|115486053|ref|NP_001068170.1| Os11g0586900 [Oryza sativa (... 41.2 0.001 gi|15237901|ref|NP_197208.1| GTP binding [Arabidopsis thalian... 41.2 0.001 gi|15226086|ref|NP_179133.1| ATARFB1A; GTP binding [Arabidops... 41.2 0.001 gi|92890618|gb|ABE90428.1| ARF/SAR superfamily [Medicago truncat 40.4 0.002 gi|92890620|gb|ABE90430.1| Ras GTPase [Medicago truncatula] 40.4 0.002 gi|58220034|gb|AAW67545.1| ADP-ribosylation factor [Daucus carot 40.4 0.002 gi|15228464|ref|NP_186962.1| ATARFB1C; GTP binding [Arabidops... 40.4 0.002 gi|115483682|ref|NP_001065511.1| Os10g0580200 [Oryza sativa (... 40.0 0.002 gi|115443985|ref|NP_001045772.1| Os02g0128600 [Oryza sativa (... 40.0 0.002 gi|15228912|ref|NP_188935.1| ATARFC1; GTP binding [Arabidopsi... 40.0 0.002 gi|32401906|gb|AAP80941.1| ADP-ribosylation factor [Gossypium ba 34.3 0.003 gi|20197875|gb|AAM15297.1| ADP-ribosylation factor 3 [Arabido... 39.7 0.003 gi|30682545|ref|NP_850057.1| GTP binding / guanyl nucleotide ... 39.7 0.003 gi|3182922|sp|Q96361|ARF1_BRARP ADP-ribosylation factor 1 >gi... 39.7 0.003 gi|18378965|ref|NP_563652.1| ATARFD1A; GTP binding [Arabidopsis 39.3 0.004 gi|9857537|gb|AAG00892.1|AC064879_10 Similar to ADP-ribosylation 39.3 0.004 gi|9972392|gb|AAG10642.1|AC022521_20 Similar to ADP-ribosylation 39.3 0.004 gi|8778579|gb|AAF79587.1|AC007945_7 F28C11.12 [Arabidopsis thali 39.3 0.004 gi|42561632|ref|NP_171745.2| ATARFD1B; GTP binding [Arabidopsis 39.3 0.004 gi|41052966|dbj|BAD07876.1| putative ADP-ribosylation factor ... 38.9 0.005 gi|115475543|ref|NP_001061368.1| Os08g0248900 [Oryza sativa (... 37.0 0.021 gi|92875403|gb|ABE83396.1| Guanine nucleotide binding protein... 35.4 0.061 gi|56122686|gb|AAV74406.1| glycerophosphodiester phosphodiest... 30.8 1.5 gi|116057640|emb|CAL53843.1| GTP-binding ADP-ribosylation fac... 30.4 2.0 gi|15224165|ref|NP_179430.1| TTN5 (TITAN 5); GTP binding [Ara... 29.6 3.3 gi|7248402|dbj|BAA92725.1| putative ADP-ribosylation factor [... 29.6 3.3 gi|115445861|ref|NP_001046710.1| Os02g0327100 [Oryza sativa (... 28.5 7.4
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 235 Number of extensions: 0 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 388 Length of database: 101054579 Length adjustment: 95 Effective length of query: 293 Effective length of database: 74136424 Effective search space: 2520638416 Effective search space used: 2520638416 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)