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BLASTX 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168945039-19463-138375641472.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig321
Length=547


Distribution of 25 Blast Hits on the Query Sequence



                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|30693656|ref|NP_850684.1|  ubiquitin conjugating enzyme/ ub...   128    1e-29 UniGene infoGene info
gi|18409633|ref|NP_566968.1|  ubiquitin conjugating enzyme/ ub...   127    3e-29 UniGene infoGene info
gi|76160962|gb|ABA40444.1|  ubiquitin-conjugating enzyme famil...   125    7e-29
gi|46577794|gb|AAT01417.1|  ubiquitin-conjugating enzyme famil...   117    2e-26
gi|30686662|ref|NP_850259.1|  ubiquitin conjugating enzyme/ ub...   117    3e-26 UniGene infoGene info
gi|18404032|ref|NP_565834.1|  ubiquitin conjugating enzyme/ ub...   116    6e-26 UniGene infoGene info
gi|115478418|ref|NP_001062804.1|  Os09g0297100 [Oryza sativa (...   112    1e-24 Gene info
gi|75755857|gb|ABA26987.1|  TO38-23 [Taraxacum officinale]          109    7e-24
gi|71040677|gb|AAZ20287.1|  ubiquitin-conjugating enzyme 2 [Arach   103    3e-22
gi|32488709|emb|CAE03452.1|  OSJNBa0088H09.10 [Oryza sativa (j...  94.7    2e-19 Gene info
gi|115489474|ref|NP_001067224.1|  Os12g0605400 [Oryza sativa (...  93.6    4e-19 Gene info
gi|115454925|ref|NP_001051063.1|  Os03g0712300 [Oryza sativa (...  92.4    9e-19 Gene info
gi|2982253|gb|AAC32114.1|  CROC-1-like protein [Picea mariana]     92.0    1e-18
gi|21593918|gb|AAM65883.1|  E2, ubiquitin-conjugating enzyme, ...  89.4    8e-18 UniGene info
gi|18409647|ref|NP_564994.1|  ubiquitin conjugating enzyme/ ub...  89.4    8e-18 UniGene infoGene info
gi|18395221|ref|NP_564191.1|  ubiquitin conjugating enzyme/ ub...  89.0    1e-17 UniGene infoGene info
gi|9295713|gb|AAF87019.1|AC005292_28  F26F24.10 [Arabidopsis thal  87.8    2e-17
gi|13324790|gb|AAK18838.1|AC082645_8  putative DNA-binding protei  86.3    6e-17 Gene info
gi|115461424|ref|NP_001054312.1|  Os04g0684800 [Oryza sativa (...  75.9    9e-14 Gene info
gi|17644141|gb|AAL38985.1|  ubiquitin-conjugating enzyme E2 is...  67.8    2e-11 UniGene info
gi|75755827|gb|ABA26973.1|  TO25-123 [Taraxacum officinale]        55.8    9e-08
gi|116059844|emb|CAL55551.1|  Ubiquitin-conjugating enzyme E2 (IS  38.5    0.015
gi|33321008|gb|AAQ06255.1|  unknown [Sorghum bicolor]              32.3    1.1  
gi|115442591|ref|NP_001045575.1|  Os01g0977600 [Oryza sativa (...  30.0    5.5   Gene info
gi|92884339|gb|ABE87321.1|  hypothetical protein MtrDRAFT_AC15...  29.3    9.3  
Alignments
>gi|30693656|ref|NP_850684.1| UniGene infoGene info ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme [Arabidopsis thaliana] Length=147 Score = 128 bits (322), Expect = 1e-29 Identities = 77/117 (65%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Frame = +2 Query 197 MTLGSGGSSVVVPRNFRlleeleRGEKGIGDGTASYGMDDGDDIYMPLLDWHHYWSSQYC 376 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGT SYGMDDGDDIYM Sbjct 1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVT 60 Query 377 THKVESINLKLVW**KISKRSLPSVRFHSRINMTWVNHETGVXGPKKFGLLAKWQXE 547 H+ LKL + K P+VRFHSR+NM VNHETGV PKKFGLLA WQ E Sbjct 61 VHEGRIYQLKL-FCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQRE 116 >gi|18409633|ref|NP_566968.1| UniGene infoGene info ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme [Arabidopsis thaliana] gi|4886271|emb|CAB43411.1| Gene info putative DNA-binding protein [Arabidopsis thaliana] gi|14596117|gb|AAK68786.1| UniGene infoGene info Unknown protein [Arabidopsis thaliana] gi|18377482|gb|AAL66907.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|21553737|gb|AAM62830.1| UniGene infoGene info E2, ubiquitin-conjugating enzyme, putative [Arabidopsis thaliana] Length=146 Score = 127 bits (319), Expect = 3e-29 Identities = 79/118 (66%), Positives = 84/118 (71%), Gaps = 4/118 (3%) Frame = +2 Query 197 MTLGSGGSSVVVPRNFRlleeleRGEKGIGDGTASYGMDDGDDIYMPLLDWHHYWSSQYC 376 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGT SYGMDDGDDIYM W + Sbjct 1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYM--RSWTGTIIGPHN 58 Query 377 T-HKVESINLKLVW**KISKRSLPSVRFHSRINMTWVNHETGVXGPKKFGLLAKWQXE 547 T H+ LKL + K P+VRFHSR+NM VNHETGV PKKFGLLA WQ E Sbjct 59 TVHEGRIYQLKL-FCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQRE 115 >gi|76160962|gb|ABA40444.1| ubiquitin-conjugating enzyme family protein-like protein [Solanum tuberosum] gi|78191460|gb|ABB29951.1| ubiquitin-conjugating enzyme family protein-like [Solanum tuberosum] Length=146 Score = 125 bits (315), Expect = 7e-29 Identities = 78/122 (63%), Positives = 83/122 (68%), Gaps = 12/122 (9%) Frame = +2 Query 197 MTLGSGGSSVVVPRNFRlleeleRGEKGIGDGTASYGMDDGDDIYMPLLDWHHYWSS--- 367 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGT SYGMDDGDDIYM W+ Sbjct 1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYM------RSWTGTII 54 Query 368 --QYCTHKVESINLKLVW**KISKRSLPSVRFHSRINMTWVNHETGVXGPKKFGLLAKWQ 541 H+ LKL + K PSVRFHSR+NMT VNHETGV PKKF LL+ WQ Sbjct 55 GPHNSVHEGRIYQLKL-FCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFALLSNWQ 113 Query 542 XE 547 E Sbjct 114 RE 115 >gi|46577794|gb|AAT01417.1| ubiquitin-conjugating enzyme family protein [Tamarix androssowii] Length=146 Score = 117 bits (294), Expect = 2e-26 Identities = 73/118 (61%), Positives = 83/118 (70%), Gaps = 4/118 (3%) Frame = +2 Query 197 MTLGSGGSSVVVPRNFRlleeleRGEKGIGDGTASYGMDDGDDIYMPLLDWHHYWSSQYC 376 MT+GSGGSSVVVPRNFRLLEELERGEKGIGDG+ SYGMDDGDDIYM W + Sbjct 1 MTIGSGGSSVVVPRNFRLLEELERGEKGIGDGSVSYGMDDGDDIYM--RSWTGTIIGPHN 58 Query 377 T-HKVESINLKLVW**KISKRSLPSVRFHSRINMTWVNHETGVXGPKKFGLLAKWQXE 547 T H+ LKL + K PSVRFH+R+NMT VN ETGV PKKFG+L+ W + Sbjct 59 TVHEGRIYQLKL-FCDKDYPEKPPSVRFHTRVNMTCVNPETGVVEPKKFGMLSNWMRD 115 >gi|30686662|ref|NP_850259.1| UniGene infoGene info ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme [Arabidopsis thaliana] Length=146 Score = 117 bits (293), Expect = 3e-26 Identities = 74/117 (63%), Positives = 80/117 (68%), Gaps = 2/117 (1%) Frame = +2 Query 197 MTLGSGGSSVVVPRNFRlleeleRGEKGIGDGTASYGMDDGDDIYMPLLDWHHYWSSQYC 376 MTLGSG SSVVVPRNFRLLEELERGEKGIGDGT SYGMDDGDDIYM Sbjct 1 MTLGSG-SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVT 59 Query 377 THKVESINLKLVW**KISKRSLPSVRFHSRINMTWVNHETGVXGPKKFGLLAKWQXE 547 H+ LKL + K P+VRFHSRINMT VNH+TGV KKFG+LA WQ + Sbjct 60 VHEGRIYQLKL-FCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQ 115 >gi|18404032|ref|NP_565834.1| UniGene infoGene info ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme [Arabidopsis thaliana] gi|4510363|gb|AAD21451.1| Gene info E2, ubiquitin-conjugating enzyme, putative [Arabidopsis thaliana] gi|17065368|gb|AAL32838.1| UniGene infoGene info putative ubiquitin-conjugating enzyme [Arabidopsis thaliana] gi|20260068|gb|AAM13381.1| UniGene infoGene info putative ubiquitin-conjugating enzyme [Arabidopsis thaliana] Length=145 Score = 116 bits (290), Expect = 6e-26 Identities = 76/118 (64%), Positives = 83/118 (70%), Gaps = 5/118 (4%) Frame = +2 Query 197 MTLGSGGSSVVVPRNFRlleeleRGEKGIGDGTASYGMDDGDDIYMPLLDWHHYWSSQYC 376 MTLGSG SSVVVPRNFRLLEELERGEKGIGDGT SYGMDDGDDIYM W + Sbjct 1 MTLGSG-SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYM--RSWTGTIIGPHN 57 Query 377 T-HKVESINLKLVW**KISKRSLPSVRFHSRINMTWVNHETGVXGPKKFGLLAKWQXE 547 T H+ LKL + K P+VRFHSRINMT VNH+TGV KKFG+LA WQ + Sbjct 58 TVHEGRIYQLKL-FCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQ 114 >gi|115478418|ref|NP_001062804.1| Gene info Os09g0297100 [Oryza sativa (japonica cultivar-group)] gi|50725081|dbj|BAD33214.1| Gene info putative ubiquitin-conjugating enzyme family protein [Oryza sativa (japonica cultivar-group)] gi|50725506|dbj|BAD32975.1| Gene info putative ubiquitin-conjugating enzyme family protein [Oryza sativa (japonica cultivar-group)] gi|113631037|dbj|BAF24718.1| Gene info Os09g0297100 [Oryza sativa (japonica cultivar-group)] Length=148 Score = 112 bits (279), Expect = 1e-24 Identities = 74/124 (59%), Positives = 80/124 (64%), Gaps = 14/124 (11%) Frame = +2 Query 197 MTLGSGG--SSVVVPRNFRlleeleRGEKGIGDGTASYGMDDGDDIYMPLLDWHHYWSS- 367 MTLGS G SSVVVPRNFRLLEELERGEKGIGDGT SYGMDD DDIYM W+ Sbjct 1 MTLGSSGAGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYM------RSWTGT 54 Query 368 ----QYCTHKVESINLKLVW**KISKRSLPSVRFHSRINMTWVNHETGVXGPKKFGLLAK 535 H+ LKL + K PSVRFHSRINM+ VNHETG +KFG+LA Sbjct 55 IIGPHNSVHEGRIYQLKL-FCDKDYPEKPPSVRFHSRINMSCVNHETGAVDSRKFGVLAN 113 Query 536 WQXE 547 WQ E Sbjct 114 WQRE 117 >gi|75755857|gb|ABA26987.1| TO38-23 [Taraxacum officinale] Length=138 Score = 109 bits (272), Expect = 7e-24 Identities = 68/114 (59%), Positives = 75/114 (65%), Gaps = 12/114 (10%) Frame = +2 Query 221 SVVVPRNFRlleeleRGEKGIGDGTASYGMDDGDDIYMPLLDWHHYWSS-----QYCTHK 385 +VVVPRNFRLLEELERGEKGIGDGT SYGMDDGDDIYM W+ H+ Sbjct 1 NVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYM------RSWTGTIIGPHNSVHE 54 Query 386 VESINLKLVW**KISKRSLPSVRFHSRINMTWVNHETGVXGPKKFGLLAKWQXE 547 LKL + K P+VRFHSR+NMT VNHETGV PKKFG+L WQ E Sbjct 55 GRIYQLKL-FCDKDYPEKPPTVRFHSRVNMTCVNHETGVVEPKKFGILGNWQRE 107 >gi|71040677|gb|AAZ20287.1| ubiquitin-conjugating enzyme 2 [Arachis hypogaea] Length=159 Score = 103 bits (258), Expect = 3e-22 Identities = 69/120 (57%), Positives = 77/120 (64%), Gaps = 12/120 (10%) Frame = +2 Query 203 LGSGGSSVVVPRNFRlleeleRGEKGIGDGTASYGMDDGDDIYMPLLDWHHYWSSQY--- 373 +GS GSSVVVPRNFRLLEELERGEKGIGDGT SYGMDD DDIYM W+ Sbjct 1 MGSEGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYM------QSWTGTIIGP 54 Query 374 --CTHKVESINLKLVW**KISKRSLPSVRFHSRINMTWVNHETGVXGPKKFGLLAKWQXE 547 H+ LKL + K + PSVRF +RINMT VN ETGV P+ F +LA WQ E Sbjct 55 PGTVHEGRIYQLKL-FCGKDYPDNPPSVRFQTRINMTCVNQETGVVEPQLFPMLANWQRE 113 >gi|32488709|emb|CAE03452.1| Gene info OSJNBa0088H09.10 [Oryza sativa (japonica cultivar-group)] gi|90399141|emb|CAJ86165.1| H0913C04.6 [Oryza sativa (indica cultivar-group)] Length=148 Score = 94.7 bits (234), Expect = 2e-19 Identities = 68/124 (54%), Positives = 77/124 (62%), Gaps = 14/124 (11%) Frame = +2 Query 197 MTLGSGGSSVVV-PRNFRlleeleRGEKGIGDGTASYGM-DDGDDIYMPLLDWHHYWSSQ 370 MT+G SSVVV PRNFRLLEELERGEKGIGDGT SYGM DDGDDI+M W+ Sbjct 1 MTIGGASSSVVVVPRNFRLLEELERGEKGIGDGTVSYGMDDDGDDIFM------RSWTGT 54 Query 371 Y-----CTHKVESINLKLVW**KISKRSLPSVRFHSRINMTWVNHETGVXGPKKFGLLAK 535 H+ LKL + K P+VRFHSRINM VN +TG+ KKF +LA Sbjct 55 IIGPLNSVHEGRIYQLKL-FCDKDYPDKPPTVRFHSRINMPCVNPDTGLVESKKFHMLAN 113 Query 536 WQXE 547 WQ E Sbjct 114 WQRE 117 >gi|115489474|ref|NP_001067224.1| Gene info Os12g0605400 [Oryza sativa (japonica cultivar-group)] gi|77557031|gb|ABA99827.1| Gene info Ubiquitin-conjugating enzyme spm2, putative, expressed [Oryza sativa (japonica cultivar-group)] gi|113649731|dbj|BAF30243.1| Gene info Os12g0605400 [Oryza sativa (japonica cultivar-group)] Length=146 Score = 93.6 bits (231), Expect = 4e-19 Identities = 62/111 (55%), Positives = 72/111 (64%), Gaps = 4/111 (3%) Frame = +2 Query 218 SSVVVPRNFRlleeleRGEKGIGDGTASYGMDDGDDIYMPLLDWHHYWSSQYCT-HKVES 394 S+VVVPRNFRLLEELERGEKGIGDG+ SYGMDD DDIYM W + T H+ Sbjct 8 SAVVVPRNFRLLEELERGEKGIGDGSVSYGMDDADDIYM--RSWTGTIIGPHNTVHEGRI 65 Query 395 INLKLVW**KISKRSLPSVRFHSRINMTWVNHETGVXGPKKFGLLAKWQXE 547 LKL R P+V+FHSRINMT VN E G+ +KF LL+ W+ E Sbjct 66 YQLKLFCDKDYPDRP-PTVKFHSRINMTCVNPENGLVDQRKFSLLSNWRRE 115 >gi|115454925|ref|NP_001051063.1| Gene info Os03g0712300 [Oryza sativa (japonica cultivar-group)] gi|108710728|gb|ABF98523.1| Gene info Ubiquitin-conjugating enzyme family protein, expressed [Oryza sativa (japonica cultivar-group)] gi|113549534|dbj|BAF12977.1| Gene info Os03g0712300 [Oryza sativa (japonica cultivar-group)] Length=161 Score = 92.4 bits (228), Expect = 9e-19 Identities = 64/122 (52%), Positives = 73/122 (59%), Gaps = 14/122 (11%) Frame = +2 Query 203 LGSGGSS--VVVPRNFRlleeleRGEKGIGDGTASYGMDDGDDIYMPLLDWHHYWSSQY- 373 +GS GS+ VVVPRNFRLLEELERGEKGIGDGT SYGMDD DDIYM W+ Sbjct 1 MGSEGSAGVVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYM------RSWTGTII 54 Query 374 ----CTHKVESINLKLVW**KISKRSLPSVRFHSRINMTWVNHETGVXGPKKFGLLAKWQ 541 H+ LKL R P+VRF +RINM+ VN ETG+ P F +L WQ Sbjct 55 GPPNTVHEGRIYQLKLFCDTDYPDRP-PTVRFQTRINMSCVNQETGMVEPSLFPMLGNWQ 113 Query 542 XE 547 E Sbjct 114 RE 115 >gi|2982253|gb|AAC32114.1| CROC-1-like protein [Picea mariana] Length=140 Score = 92.0 bits (227), Expect = 1e-18 Identities = 62/116 (53%), Positives = 70/116 (60%), Gaps = 12/116 (10%) Frame = +2 Query 215 GSSVVVPRNFRlleeleRGEKGIGDGTASYGMDDGDDIYMPLLDWHHYWSS-----QYCT 379 GSSVVVPRNFRLLEELERGEKGIGDG+ SYGMDD DDIYM W+ Sbjct 1 GSSVVVPRNFRLLEELERGEKGIGDGSVSYGMDDSDDIYM------RSWTGTIIGPHNSV 54 Query 380 HKVESINLKLVW**KISKRSLPSVRFHSRINMTWVNHETGVXGPKKFGLLAKWQXE 547 H LKL + K P+V F SR+NMT VN ETG PK F +LA W+ + Sbjct 55 HDGRIYQLKL-FCDKDYPEKAPTVGFCSRVNMTCVNQETGRVEPKHFSMLANWRRD 109 >gi|21593918|gb|AAM65883.1| UniGene info E2, ubiquitin-conjugating enzyme, putative [Arabidopsis thaliana] Length=159 Score = 89.4 bits (220), Expect = 8e-18 Identities = 60/115 (52%), Positives = 68/115 (59%), Gaps = 2/115 (1%) Frame = +2 Query 203 LGSGGSSVVVPRNFRlleeleRGEKGIGDGTASYGMDDGDDIYMPLLDWHHYWSSQYCTH 382 +GS VVVPRNFRLLEELERGEKGIGDGT SYGMDD DDI M W + T Sbjct 1 MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQ--SWTGTILGPHNTA 58 Query 383 KVESINLKLVW**KISKRSLPSVRFHSRINMTWVNHETGVXGPKKFGLLAKWQXE 547 I ++ K S P+VRF SRINM VN E GV P F +L+ W+ E Sbjct 59 YEGKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRRE 113 >gi|18409647|ref|NP_564994.1| UniGene infoGene info ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme [Arabidopsis thaliana] gi|12324761|gb|AAG52343.1|AC011663_22 Gene info unknown protein; 63834-62640 [Arabidopsis thaliana] gi|28393238|gb|AAO42048.1| UniGene infoGene info putative E2, ubiquitin-conjugating enzyme [Arabidopsis thaliana] gi|28827264|gb|AAO50476.1| UniGene infoGene info putative E2, ubiquitin-conjugating enzyme [Arabidopsis thaliana] Length=159 Score = 89.4 bits (220), Expect = 8e-18 Identities = 60/115 (52%), Positives = 68/115 (59%), Gaps = 2/115 (1%) Frame = +2 Query 203 LGSGGSSVVVPRNFRlleeleRGEKGIGDGTASYGMDDGDDIYMPLLDWHHYWSSQYCTH 382 +GS VVVPRNFRLLEELERGEKGIGDGT SYGMDD DDI M W + T Sbjct 1 MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQ--SWTGTILGPHNTA 58 Query 383 KVESINLKLVW**KISKRSLPSVRFHSRINMTWVNHETGVXGPKKFGLLAKWQXE 547 I ++ K S P+VRF SRINM VN E GV P F +L+ W+ E Sbjct 59 YEGKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRRE 113 >gi|18395221|ref|NP_564191.1| UniGene infoGene info ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme [Arabidopsis thaliana] gi|16649053|gb|AAL24378.1| UniGene infoGene info similar to DNA binding protein [Arabidopsis thaliana] gi|20259984|gb|AAM13339.1| UniGene infoGene info similar to DNA binding protein [Arabidopsis thaliana] Length=158 Score = 89.0 bits (219), Expect = 1e-17 Identities = 61/120 (50%), Positives = 72/120 (60%), Gaps = 12/120 (10%) Frame = +2 Query 203 LGSGGSSVVVPRNFRlleeleRGEKGIGDGTASYGMDDGDDIYMPLLDWHHYWSSQY--- 373 + S + VVVPRNFRLLEELERGEKGIGDGT SYGMDD DDIYM W+ Sbjct 1 MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYM------QSWTGTILGP 54 Query 374 --CTHKVESINLKLVW**KISKRSLPSVRFHSRINMTWVNHETGVXGPKKFGLLAKWQXE 547 ++ + LKL + K S P+VRF +RINM VN ETGV P F +L W+ E Sbjct 55 PNTAYEGKIFQLKL-FCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRRE 113 >gi|9295713|gb|AAF87019.1|AC005292_28 F26F24.10 [Arabidopsis thaliana] Length=171 Score = 87.8 bits (216), Expect = 2e-17 Identities = 61/126 (48%), Positives = 72/126 (57%), Gaps = 11/126 (8%) Frame = +2 Query 203 LGSGGSSVVVPRNFRlleeleRGEKGIGDGTASYGMDDGDDIYMP-----------LLDW 349 + S + VVVPRNFRLLEELERGEKGIGDGT SYGMDD DDIYM +D Sbjct 1 MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNKIDV 60 Query 350 HHYWSSQYCTHKVESINLKLVW**KISKRSLPSVRFHSRINMTWVNHETGVXGPKKFGLL 529 ++Y T I ++ K S P+VRF +RINM VN ETGV P F +L Sbjct 61 FCLVMNEYQTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPML 120 Query 530 AKWQXE 547 W+ E Sbjct 121 TNWRRE 126 >gi|13324790|gb|AAK18838.1|AC082645_8 Gene info putative DNA-binding protein [Oryza sativa] Length=161 Score = 86.3 bits (212), Expect = 6e-17 Identities = 58/111 (52%), Positives = 65/111 (58%), Gaps = 12/111 (10%) Frame = +2 Query 230 VPRNFRlleeleRGEKGIGDGTASYGMDDGDDIYMPLLDWHHYWSSQY-----CTHKVES 394 VPRNFRLLEELERGEKGIGDGT SYGMDD DDIYM W+ H+ Sbjct 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYM------RSWTGTIIGPPNTVHEGRI 65 Query 395 INLKLVW**KISKRSLPSVRFHSRINMTWVNHETGVXGPKKFGLLAKWQXE 547 LKL R P+VRF +RINM+ VN ETG+ P F +L WQ E Sbjct 66 YQLKLFCDTDYPDRP-PTVRFQTRINMSCVNQETGMVEPSLFPMLGNWQRE 115 >gi|115461424|ref|NP_001054312.1| Gene info Os04g0684800 [Oryza sativa (japonica cultivar-group)] gi|113565883|dbj|BAF16226.1| Gene info Os04g0684800 [Oryza sativa (japonica cultivar-group)] Length=151 Score = 75.9 bits (185), Expect = 9e-14 Identities = 49/100 (49%), Positives = 56/100 (56%), Gaps = 13/100 (13%) Frame = +2 Query 266 RGEKGIGDGTASYGMDD-GDDIYMPLLDWHHYWSSQYC-----THKVESINLKLVW**KI 427 RGEKGIGDGT SYGMDD GDDI+M W+ H+ LKL K Sbjct 28 RGEKGIGDGTVSYGMDDDGDDIFM------RSWTGTIIGPLNSVHEGRIYQLKLFCD-KD 80 Query 428 SKRSLPSVRFHSRINMTWVNHETGVXGPKKFGLLAKWQXE 547 P+VRFHSRINM VN +TG+ KKF +LA WQ E Sbjct 81 YPDKPPTVRFHSRINMPCVNPDTGLVESKKFHMLANWQRE 120 >gi|17644141|gb|AAL38985.1| UniGene info ubiquitin-conjugating enzyme E2 isoform [Chlamydomonas reinhardtii] Length=139 Score = 67.8 bits (164), Expect = 2e-11 Identities = 48/114 (42%), Positives = 63/114 (55%), Gaps = 12/114 (10%) Frame = +2 Query 221 SVVVPRNFRlleeleRGEKGIGDGTASYGMDDGDDIYMPLLDWHHYWSSQY-----CTHK 385 SV VPR+FRLLEEL+RGEKG GDGT SYGM+D DDI+M W+ H Sbjct 2 SVPVPRSFRLLEELDRGEKGFGDGTVSYGMEDPDDIHM------RNWTGTIIGPANTVHD 55 Query 386 VESINLKLVW**KISKRSLPSVRFHSRINMTWVNHETGVXGPKKFGLLAKWQXE 547 +LK+ +++ P + F SR+NM V+ G P KF +L W+ E Sbjct 56 QRIYSLKIHCDLSYPEQA-PKLWFKSRVNMGCVDQRDGRIDPTKFPMLGNWKRE 108 >gi|75755827|gb|ABA26973.1| TO25-123 [Taraxacum officinale] Length=67 Score = 55.8 bits (133), Expect = 9e-08 Identities = 36/73 (49%), Positives = 40/73 (54%), Gaps = 12/73 (16%) Frame = +2 Query 266 RGEKGIGDGTASYGMDDGDDIYMPLLDWHHYWSS-----QYCTHKVESINLKLVW**KIS 430 RGEKGIGDGT SYGMDDGDDIYM W+ H+ LKL + K Sbjct 2 RGEKGIGDGTVSYGMDDGDDIYM------RSWTGTIIGPHNSVHEGRIYQLKL-FCDKDY 54 Query 431 KRSLPSVRFHSRI 469 P+VRFHSRI Sbjct 55 PEKPPTVRFHSRI 67 >gi|116059844|emb|CAL55551.1| Ubiquitin-conjugating enzyme E2 (ISS) [Ostreococcus tauri] Length=148 Score = 38.5 bits (88), Expect = 0.015 Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 15/104 (14%) Frame = +2 Query 206 GSGGSSVVVPRNFRlleeleRGEKGIGDGT---ASYGMDDGDDIYMPLLDWHHYWSSQY- 373 G GG VVVPR F+LL+ELE+GEKG G G SYG+ D DD D +W+ Sbjct 3 GGGGEDVVVPRAFKLLKELEKGEKG-GAGLPPYLSYGLADADDD-----DDLTHWTGTIL 56 Query 374 ----CTHKVESINLKLVW**KISKRSLPSVRFHSRINMTWVNHE 493 T + + L + + +R P +RF +R+N+ +V ++ Sbjct 57 GPAGTTLDMRVLELSIECGERYPERP-PEMRFRTRVNLPFVRND 99 >gi|33321008|gb|AAQ06255.1| unknown [Sorghum bicolor] Length=509 Score = 32.3 bits (72), Expect = 1.1 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 9/68 (13%) Frame = -3 Query 392 IRPCVYSIVRTNNGASPR--------AACKCHLHHPFHSLQCHLQYLFLHVQAPPAI*SS 237 + P + ++R PR + C C L H + +L++HVQAPP + Sbjct 163 VSPAIAELIRGKMDRPPRPPRQAPCWSDCDCKLCHSWSGTPASSSHLYVHVQAPPPT-AP 221 Query 236 EAPRHSIL 213 EAP ++ Sbjct 222 EAPIEDVV 229 >gi|115442591|ref|NP_001045575.1| Gene info Os01g0977600 [Oryza sativa (japonica cultivar-group)] gi|57899530|dbj|BAD87044.1| Gene info zinc finger protein-like [Oryza sativa (japonica cultivar-group)] gi|113535106|dbj|BAF07489.1| Gene info Os01g0977600 [Oryza sativa (japonica cultivar-group)] Length=1921 Score = 30.0 bits (66), Expect = 5.5 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%) Frame = -3 Query 386 PCVYSIVRTNNGASPRAACKCHLHHPFH 303 P YSI+ T+N + PR ACK H FH Sbjct 1872 PICYSILHTSNHSLPRLACKT-CRHKFH 1898 >gi|92884339|gb|ABE87321.1| hypothetical protein MtrDRAFT_AC151964g12v2 [Medicago truncatula] Length=286 Score = 29.3 bits (64), Expect = 9.3 Identities = 9/22 (40%), Positives = 15/22 (68%), Gaps = 0/22 (0%) Frame = +1 Query 244 QIAGGA*TWRKRYWRWHCKLWN 309 ++ G A +WR+R W W +LW+ Sbjct 106 EVGGEAWSWRRRLWVWEEELWD 127
  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 331
Number of extensions: 6
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 547
Length of database: 101054579
Length adjustment: 106
Effective length of query: 441
Effective length of database: 71019585
Effective search space: 5397488460
Effective search space used: 5397488460
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 64 (29.3 bits)