Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168945039-19463-138375641472.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig321 Length=547
Score E Sequences producing significant alignments: (Bits) Value gi|30693656|ref|NP_850684.1| ubiquitin conjugating enzyme/ ub... 128 1e-29 gi|18409633|ref|NP_566968.1| ubiquitin conjugating enzyme/ ub... 127 3e-29 gi|76160962|gb|ABA40444.1| ubiquitin-conjugating enzyme famil... 125 7e-29 gi|46577794|gb|AAT01417.1| ubiquitin-conjugating enzyme famil... 117 2e-26 gi|30686662|ref|NP_850259.1| ubiquitin conjugating enzyme/ ub... 117 3e-26 gi|18404032|ref|NP_565834.1| ubiquitin conjugating enzyme/ ub... 116 6e-26 gi|115478418|ref|NP_001062804.1| Os09g0297100 [Oryza sativa (... 112 1e-24 gi|75755857|gb|ABA26987.1| TO38-23 [Taraxacum officinale] 109 7e-24 gi|71040677|gb|AAZ20287.1| ubiquitin-conjugating enzyme 2 [Arach 103 3e-22 gi|32488709|emb|CAE03452.1| OSJNBa0088H09.10 [Oryza sativa (j... 94.7 2e-19 gi|115489474|ref|NP_001067224.1| Os12g0605400 [Oryza sativa (... 93.6 4e-19 gi|115454925|ref|NP_001051063.1| Os03g0712300 [Oryza sativa (... 92.4 9e-19 gi|2982253|gb|AAC32114.1| CROC-1-like protein [Picea mariana] 92.0 1e-18 gi|21593918|gb|AAM65883.1| E2, ubiquitin-conjugating enzyme, ... 89.4 8e-18 gi|18409647|ref|NP_564994.1| ubiquitin conjugating enzyme/ ub... 89.4 8e-18 gi|18395221|ref|NP_564191.1| ubiquitin conjugating enzyme/ ub... 89.0 1e-17 gi|9295713|gb|AAF87019.1|AC005292_28 F26F24.10 [Arabidopsis thal 87.8 2e-17 gi|13324790|gb|AAK18838.1|AC082645_8 putative DNA-binding protei 86.3 6e-17 gi|115461424|ref|NP_001054312.1| Os04g0684800 [Oryza sativa (... 75.9 9e-14 gi|17644141|gb|AAL38985.1| ubiquitin-conjugating enzyme E2 is... 67.8 2e-11 gi|75755827|gb|ABA26973.1| TO25-123 [Taraxacum officinale] 55.8 9e-08 gi|116059844|emb|CAL55551.1| Ubiquitin-conjugating enzyme E2 (IS 38.5 0.015 gi|33321008|gb|AAQ06255.1| unknown [Sorghum bicolor] 32.3 1.1 gi|115442591|ref|NP_001045575.1| Os01g0977600 [Oryza sativa (... 30.0 5.5 gi|92884339|gb|ABE87321.1| hypothetical protein MtrDRAFT_AC15... 29.3 9.3
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 331 Number of extensions: 6 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 547 Length of database: 101054579 Length adjustment: 106 Effective length of query: 441 Effective length of database: 71019585 Effective search space: 5397488460 Effective search space used: 5397488460 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)