RID=1168945152-26424-141142348186.BLASTQ4, Contig323

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168945152-26424-141142348186.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig323
Length=445

Related Structures

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|3122703|sp|O22644|RL23A_FRIAG  60S ribosomal protein L23A >...   130    2e-30
gi|7340791|emb|CAA63107.1|  ribosomal protein L23 [Spinacia olera   126    2e-29
gi|7711063|emb|CAA63112.1|  ribosomal protein L23 [Spinacia olera   124    9e-29
gi|585876|sp|Q07761|RL23A_TOBAC  60S ribosomal protein L23a (L...   120    9e-28
gi|49036456|sp|Q9AT35|RL23A_DAUCA  60S ribosomal protein L23a ...   120    1e-27
gi|115436432|ref|NP_001042974.1|  Os01g0348700 [Oryza sativa (...   119    3e-27 
gi|115459252|ref|NP_001053226.1|  Os04g0501000 [Oryza sativa (...   119    5e-27 
gi|90265143|emb|CAC09511.2|  H0711G06.17 [Oryza sativa (indica...   119    5e-27
gi|76573339|gb|ABA46774.1|  ribosomal protein L25-like protein [S   117    1e-26 
gi|83032249|gb|ABB97038.1|  unknown [Brassica rapa]                 117    1e-26
gi|110590379|pdb|2GO5|4  Chain 4, Structure Of Signal Recognit...   116    3e-26 
gi|15233226|ref|NP_191088.1|  RNA binding / structural constit...   115    3e-26 
gi|2654122|gb|AAB87692.1|  ribosomal protein L23a [Arabidopsis th   115    5e-26 
gi|21592339|gb|AAM64290.1|  60S ribosomal protein L23A [Arabidops   115    5e-26 
gi|15225470|ref|NP_181478.1|  ATRPL23A (RIBOSOMAL PROTEIN L23A...   115    5e-26 
gi|3264605|gb|AAC24573.1|  ribosomal protein L25 [Zea mays]         104    1e-22 
gi|116059434|emb|CAL55141.1|  60s ribosomal protein L23 (ISS) [Os  68.9    6e-12
gi|7340796|emb|CAA62040.1|  Chloroplast ribosomal protein L23 [Sp  51.2    2e-07
gi|22331033|ref|NP_683557.1|  ubiquitin conjugating enzyme/ ub...  30.0    3.3   
gi|8778557|gb|AAF79565.1|AC022464_23  F22G5.32 [Arabidopsis thali  28.5    9.5

Alignments

 

>gi|3122703|sp|O22644|RL23A_FRIAG  60S ribosomal protein L23A
 gi|2641201|gb|AAB86852.1|  ribosomal protein L23a [Fritillaria agrestis]
Length=154

 Score =  130 bits (326),  Expect(2) = 2e-30
 Identities = 80/84 (95%), Positives = 82/84 (97%), Gaps = 0/84 (0%)
 Frame = +3

Query  171  VTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFivdir  350
            VTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILK+PLTTESAMKKIEDNNTLVFIVDIR
Sbjct  42   VTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIR  101

Query  351  adkkkikdavkkMYDIQAKKVNTV  422
            ADKKKIK AVKKMYDIQ KKVNT+
Sbjct  102  ADKKKIKAAVKKMYDIQTKKVNTL  125


 Score = 21.6 bits (44),  Expect(2) = 2e-30
 Identities = 9/13 (69%), Positives = 10/13 (76%), Gaps = 0/13 (0%)
 Frame = +1

Query  406  RK*TPLIRPDGTK  444
            +K   LIRPDGTK
Sbjct  120  KKVNTLIRPDGTK  132


>gi|7340791|emb|CAA63107.1|  ribosomal protein L23 [Spinacia oleracea]
Length=155

 Score =  126 bits (317),  Expect(2) = 2e-29
 Identities = 80/84 (95%), Positives = 82/84 (97%), Gaps = 0/84 (0%)
 Frame = +3

Query  171  VTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFivdir  350
            VTFHRPKT KK+RNPKYPRISA PRNKLDHYQILKFPLTTESAMKKIEDNNTLVFIVDIR
Sbjct  43   VTFHRPKTFKKERNPKYPRISATPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFIVDIR  102

Query  351  adkkkikdavkkMYDIQAKKVNTV  422
            ADKKKIKDAVKKMYDIQAKKVNT+
Sbjct  103  ADKKKIKDAVKKMYDIQAKKVNTL  126


 Score = 21.6 bits (44),  Expect(2) = 2e-29
 Identities = 9/13 (69%), Positives = 10/13 (76%), Gaps = 0/13 (0%)
 Frame = +1

Query  406  RK*TPLIRPDGTK  444
            +K   LIRPDGTK
Sbjct  121  KKVNTLIRPDGTK  133


>gi|7711063|emb|CAA63112.1|  ribosomal protein L23 [Spinacia oleracea]
Length=155

 Score =  124 bits (311),  Expect(2) = 9e-29
 Identities = 78/84 (92%), Positives = 82/84 (97%), Gaps = 0/84 (0%)
 Frame = +3

Query  171  VTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFivdir  350
            VTFHRPKT KK+RNPKYPRISA PRNKLDHYQILK+PLTTESAMKKIEDNNTLVFIVDIR
Sbjct  43   VTFHRPKTFKKERNPKYPRISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIR  102

Query  351  adkkkikdavkkMYDIQAKKVNTV  422
            ADKKKIKDAVKKMYDIQ+KKVNT+
Sbjct  103  ADKKKIKDAVKKMYDIQSKKVNTL  126


 Score = 21.6 bits (44),  Expect(2) = 9e-29
 Identities = 9/13 (69%), Positives = 10/13 (76%), Gaps = 0/13 (0%)
 Frame = +1

Query  406  RK*TPLIRPDGTK  444
            +K   LIRPDGTK
Sbjct  121  KKVNTLIRPDGTK  133


>gi|585876|sp|Q07761|RL23A_TOBAC  60S ribosomal protein L23a (L25)
 gi|310935|gb|AAA53296.1|  60S ribosomal protein L25
Length=154

 Score =  120 bits (302),  Expect(2) = 9e-28
 Identities = 77/84 (91%), Positives = 80/84 (95%), Gaps = 0/84 (0%)
 Frame = +3

Query  171  VTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFivdir  350
            VTFHRPKTLKKDRNPKYPRISAP RNKLD Y ILK+PLTTESAMKKIEDNNTLVFIVDI+
Sbjct  42   VTFHRPKTLKKDRNPKYPRISAPGRNKLDQYGILKYPLTTESAMKKIEDNNTLVFIVDIK  101

Query  351  adkkkikdavkkMYDIQAKKVNTV  422
            ADKKKIKDAVKKMYDIQ KKVNT+
Sbjct  102  ADKKKIKDAVKKMYDIQTKKVNTL  125


 Score = 21.6 bits (44),  Expect(2) = 9e-28
 Identities = 9/13 (69%), Positives = 10/13 (76%), Gaps = 0/13 (0%)
 Frame = +1

Query  406  RK*TPLIRPDGTK  444
            +K   LIRPDGTK
Sbjct  120  KKVNTLIRPDGTK  132


>gi|49036456|sp|Q9AT35|RL23A_DAUCA  60S ribosomal protein L23a
 gi|13560777|gb|AAK30202.1|AF349961_1  ribosome protein L23a [Daucus carota]
Length=154

 Score =  120 bits (301),  Expect(2) = 1e-27
 Identities = 76/84 (90%), Positives = 80/84 (95%), Gaps = 0/84 (0%)
 Frame = +3

Query  171  VTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFivdir  350
            VTFHRP+TL KDRNPKYPRISA PRNKLD YQILK+PLTTESAMKKIEDNNTLVFIVDIR
Sbjct  42   VTFHRPRTLTKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIR  101

Query  351  adkkkikdavkkMYDIQAKKVNTV  422
            A+KKKIKDAVKKMYDIQ KKVNT+
Sbjct  102  ANKKKIKDAVKKMYDIQTKKVNTL  125


 Score = 21.6 bits (44),  Expect(2) = 1e-27
 Identities = 9/13 (69%), Positives = 10/13 (76%), Gaps = 0/13 (0%)
 Frame = +1

Query  406  RK*TPLIRPDGTK  444
            +K   LIRPDGTK
Sbjct  120  KKVNTLIRPDGTK  132


>gi|115436432|ref|NP_001042974.1|  Os01g0348700 [Oryza sativa (japonica cultivar-group)]
 gi|15290206|dbj|BAB63895.1|  putative 60S ribosomal protein L23A [Oryza sativa (japonica cultivar-group)]
 gi|21104815|dbj|BAB93400.1|  putative 60S ribosomal protein L23A [Oryza sativa (japonica cultivar-group)]
 gi|113532505|dbj|BAF04888.1|  Os01g0348700 [Oryza sativa (japonica cultivar-group)]
Length=152

 Score =  119 bits (299),  Expect = 3e-27
 Identities = 74/84 (88%), Positives = 80/84 (95%), Gaps = 0/84 (0%)
 Frame = +3

Query  171  VTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFivdir  350
            VTFHRPKTLKK R+PKYPR+SAP RNKLD YQILK+PLTTESAMKKIEDNNTLVFIVD++
Sbjct  40   VTFHRPKTLKKARDPKYPRVSAPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLK  99

Query  351  adkkkikdavkkMYDIQAKKVNTV  422
            ADKKKIK AVKKMYDIQAKKVNT+
Sbjct  100  ADKKKIKAAVKKMYDIQAKKVNTL  123


>gi|115459252|ref|NP_001053226.1|  Os04g0501000 [Oryza sativa (japonica cultivar-group)]
 gi|70663909|emb|CAE01636.3|  OSJNBa0029H02.21 [Oryza sativa (japonica cultivar-group)]
 gi|113564797|dbj|BAF15140.1|  Os04g0501000 [Oryza sativa (japonica cultivar-group)]
Length=192

 Score =  119 bits (297),  Expect = 5e-27
 Identities = 73/84 (86%), Positives = 79/84 (94%), Gaps = 0/84 (0%)
 Frame = +3

Query  171  VTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFivdir  350
            VTFHRPKTLKK R+PKYPR+S P RNKLD YQILK+PLTTESAMKKIEDNNTLVFIVD++
Sbjct  80   VTFHRPKTLKKSRDPKYPRVSTPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLK  139

Query  351  adkkkikdavkkMYDIQAKKVNTV  422
            ADKKKIK AVKKMYDIQAKKVNT+
Sbjct  140  ADKKKIKAAVKKMYDIQAKKVNTL  163


>gi|90265143|emb|CAC09511.2|  H0711G06.17 [Oryza sativa (indica cultivar-group)]
 gi|116310754|emb|CAH67548.1|  H0311C03.2 [Oryza sativa (indica cultivar-group)]
Length=152

 Score =  119 bits (297),  Expect = 5e-27
 Identities = 73/84 (86%), Positives = 79/84 (94%), Gaps = 0/84 (0%)
 Frame = +3

Query  171  VTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFivdir  350
            VTFHRPKTLKK R+PKYPR+S P RNKLD YQILK+PLTTESAMKKIEDNNTLVFIVD++
Sbjct  40   VTFHRPKTLKKSRDPKYPRVSTPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLK  99

Query  351  adkkkikdavkkMYDIQAKKVNTV  422
            ADKKKIK AVKKMYDIQAKKVNT+
Sbjct  100  ADKKKIKAAVKKMYDIQAKKVNTL  123


>gi|76573339|gb|ABA46774.1|  ribosomal protein L25-like protein [Solanum tuberosum]
Length=153

 Score =  117 bits (293),  Expect(2) = 1e-26
 Identities = 72/84 (85%), Positives = 79/84 (94%), Gaps = 0/84 (0%)
 Frame = +3

Query  171  VTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFivdir  350
            VTFHRP+TLKKDR+PKYPR+SAP RNKLD Y ILK+PLTTESAMKKIEDNNTLVFIVDI+
Sbjct  41   VTFHRPRTLKKDRSPKYPRVSAPGRNKLDQYAILKYPLTTESAMKKIEDNNTLVFIVDIK  100

Query  351  adkkkikdavkkMYDIQAKKVNTV  422
            ADKKKIK AVKKMYDIQ KK+NT+
Sbjct  101  ADKKKIKAAVKKMYDIQTKKINTL  124


 Score = 21.6 bits (44),  Expect(2) = 1e-26
 Identities = 9/13 (69%), Positives = 10/13 (76%), Gaps = 0/13 (0%)
 Frame = +1

Query  406  RK*TPLIRPDGTK  444
            +K   LIRPDGTK
Sbjct  119  KKINTLIRPDGTK  131


>gi|83032249|gb|ABB97038.1|  unknown [Brassica rapa]
Length=154

 Score =  117 bits (292),  Expect(2) = 1e-26
 Identities = 76/84 (90%), Positives = 79/84 (94%), Gaps = 0/84 (0%)
 Frame = +3

Query  171  VTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFivdir  350
            VTFHRPKTL K R+PKYPRISA PRNKLDHY ILK+PLTTESAMKKIEDNNTLVFIVDIR
Sbjct  42   VTFHRPKTLTKARDPKYPRISATPRNKLDHYGILKYPLTTESAMKKIEDNNTLVFIVDIR  101

Query  351  adkkkikdavkkMYDIQAKKVNTV  422
            ADKKKIKDAVKKMYDIQ KKVNT+
Sbjct  102  ADKKKIKDAVKKMYDIQTKKVNTL  125


 Score = 21.6 bits (44),  Expect(2) = 1e-26
 Identities = 9/13 (69%), Positives = 10/13 (76%), Gaps = 0/13 (0%)
 Frame = +1

Query  406  RK*TPLIRPDGTK  444
            +K   LIRPDGTK
Sbjct  120  KKVNTLIRPDGTK  132


>gi|110590379|pdb|2GO5|4  Chain 4, Structure Of Signal Recognition Particle Receptor (Sr) 
In Complex With Signal Recognition Particle (Srp) And Ribosome 
Nascent Chain Complex
 gi|119390381|pdb|2J37|4  Chain 4, Model Of Mammalian Srp Bound To 80s Rncs
Length=152

 Score =  116 bits (291),  Expect = 3e-26
 Identities = 73/84 (86%), Positives = 78/84 (92%), Gaps = 0/84 (0%)
 Frame = +3

Query  171  VTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFivdir  350
            VTFHRPKTL K R+PKYPRIS P RNKLD YQILK+PLTTESAMKKIEDNNTLVFIVD++
Sbjct  40   VTFHRPKTLSKARDPKYPRISTPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLK  99

Query  351  adkkkikdavkkMYDIQAKKVNTV  422
            ADKKKIK AVKKMYDIQAKKVNT+
Sbjct  100  ADKKKIKAAVKKMYDIQAKKVNTL  123


>gi|15233226|ref|NP_191088.1|  RNA binding / structural constituent of ribosome [Arabidopsis 
thaliana]
 gi|73914092|sp|Q9M3C3|R23A2_ARATH  60S ribosomal protein L23a-2
 gi|7019661|emb|CAB75762.1|  ribosomal L23a-like protein [Arabidopsis thaliana]
 gi|15215831|gb|AAK91460.1|  AT3g55280/T26I12_160 [Arabidopsis thaliana]
 gi|21553861|gb|AAM62954.1|  ribosomal L23a-like protein [Arabidopsis thaliana]
 gi|23308155|gb|AAN18047.1|  At3g55280/T26I12_160 [Arabidopsis thaliana]
Length=154

 Score =  115 bits (289),  Expect(2) = 3e-26
 Identities = 75/84 (89%), Positives = 78/84 (92%), Gaps = 0/84 (0%)
 Frame = +3

Query  171  VTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFivdir  350
            VTFHRPKTL   R PKYP+ISA PRNKLDHYQILK+PLTTESAMKKIEDNNTLVFIVDIR
Sbjct  42   VTFHRPKTLTVPRKPKYPKISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIR  101

Query  351  adkkkikdavkkMYDIQAKKVNTV  422
            ADKKKIKDAVKKMYDIQ KKVNT+
Sbjct  102  ADKKKIKDAVKKMYDIQTKKVNTL  125


 Score = 21.6 bits (44),  Expect(2) = 3e-26
 Identities = 9/13 (69%), Positives = 10/13 (76%), Gaps = 0/13 (0%)
 Frame = +1

Query  406  RK*TPLIRPDGTK  444
            +K   LIRPDGTK
Sbjct  120  KKVNTLIRPDGTK  132


>gi|2654122|gb|AAB87692.1|  ribosomal protein L23a [Arabidopsis thaliana]
Length=154

 Score =  115 bits (287),  Expect(2) = 5e-26
 Identities = 75/84 (89%), Positives = 78/84 (92%), Gaps = 0/84 (0%)
 Frame = +3

Query  171  VTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFivdir  350
            VTFHRPKTL K R  KYP+ISA PRNKLDHYQILK+PLTTESAMKKIEDNNTLVFIVDIR
Sbjct  42   VTFHRPKTLTKPRTGKYPKISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIR  101

Query  351  adkkkikdavkkMYDIQAKKVNTV  422
            ADKKKIKDAVKKMYDIQ KKVNT+
Sbjct  102  ADKKKIKDAVKKMYDIQTKKVNTL  125


 Score = 21.6 bits (44),  Expect(2) = 5e-26
 Identities = 9/13 (69%), Positives = 10/13 (76%), Gaps = 0/13 (0%)
 Frame = +1

Query  406  RK*TPLIRPDGTK  444
            +K   LIRPDGTK
Sbjct  120  KKVNTLIRPDGTK  132


>gi|21592339|gb|AAM64290.1|  60S ribosomal protein L23A [Arabidopsis thaliana]
Length=154

 Score =  115 bits (287),  Expect(2) = 5e-26
 Identities = 75/84 (89%), Positives = 78/84 (92%), Gaps = 0/84 (0%)
 Frame = +3

Query  171  VTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFivdir  350
            VTFHRPKTL K R  KYP+ISA PRNKLDHYQILK+PLTTESAMKKIEDNNTLVFIVDIR
Sbjct  42   VTFHRPKTLTKPRTGKYPKISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIR  101

Query  351  adkkkikdavkkMYDIQAKKVNTV  422
            ADKKKIKDAVKKMYDIQ KKVNT+
Sbjct  102  ADKKKIKDAVKKMYDIQTKKVNTL  125


 Score = 21.6 bits (44),  Expect(2) = 5e-26
 Identities = 9/13 (69%), Positives = 10/13 (76%), Gaps = 0/13 (0%)
 Frame = +1

Query  406  RK*TPLIRPDGTK  444
            +K   LIRPDGTK
Sbjct  120  KKVNTLIRPDGTK  132


>gi|15225470|ref|NP_181478.1|  ATRPL23A (RIBOSOMAL PROTEIN L23A); RNA binding / structural constituent 
of ribosome [Arabidopsis thaliana]
 gi|73914091|sp|Q8LD46|R23A1_ARATH  60S ribosomal protein L23a-1 (AtRPL23A-1)
 gi|11762271|gb|AAG40408.1|AF325056_1  At2g39460 [Arabidopsis thaliana]
 gi|3355475|gb|AAC27837.1|  60S ribosomal protein L23A [Arabidopsis thaliana]
 gi|14335112|gb|AAK59835.1|  At2g39460/F12L6.12 [Arabidopsis thaliana]
 gi|14532452|gb|AAK63954.1|  At2g39460/F12L6.12 [Arabidopsis thaliana]
 gi|16974523|gb|AAL31171.1|  At2g39460/F12L6.12 [Arabidopsis thaliana]
Length=154

 Score =  115 bits (287),  Expect(2) = 5e-26
 Identities = 75/84 (89%), Positives = 78/84 (92%), Gaps = 0/84 (0%)
 Frame = +3

Query  171  VTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFivdir  350
            VTFHRPKTL K R  KYP+ISA PRNKLDHYQILK+PLTTESAMKKIEDNNTLVFIVDIR
Sbjct  42   VTFHRPKTLTKPRTGKYPKISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIR  101

Query  351  adkkkikdavkkMYDIQAKKVNTV  422
            ADKKKIKDAVKKMYDIQ KKVNT+
Sbjct  102  ADKKKIKDAVKKMYDIQTKKVNTL  125


 Score = 21.6 bits (44),  Expect(2) = 5e-26
 Identities = 9/13 (69%), Positives = 10/13 (76%), Gaps = 0/13 (0%)
 Frame = +1

Query  406  RK*TPLIRPDGTK  444
            +K   LIRPDGTK
Sbjct  120  KKVNTLIRPDGTK  132


>gi|3264605|gb|AAC24573.1|  ribosomal protein L25 [Zea mays]
Length=109

 Score =  104 bits (259),  Expect = 1e-22
 Identities = 68/80 (85%), Positives = 73/80 (91%), Gaps = 0/80 (0%)
 Frame = +3

Query  183  RPKTLKKDRNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFivdiradkk  362
            RP TLKK R+PKYPRIS   RNKLD YQILK+PLTTESAMKKIEDNNTLVFIVD++ADKK
Sbjct  1    RPTTLKKARDPKYPRISTTGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKK  60

Query  363  kikdavkkMYDIQAKKVNTV  422
            KIK AVKKMYDIQAKKVNT+
Sbjct  61   KIKAAVKKMYDIQAKKVNTL  80


>gi|116059434|emb|CAL55141.1|  60s ribosomal protein L23 (ISS) [Ostreococcus tauri]
Length=259

 Score = 68.9 bits (167),  Expect = 6e-12
 Identities = 51/108 (47%), Positives = 67/108 (62%), Gaps = 24/108 (22%)
 Frame = +3

Query  171  VTFHRPKTLKKDRNPKYPRISAPPRNKLDHY------------------------QILKF  278
            +T +RP+TLK +R P YPR+S P + KLD +                        QILK 
Sbjct  123  LTVYRPRTLKHERKPAYPRVSVPSKPKLDRFSVPEDSIDGRETDRRTLSSLNHSSQILKH  182

Query  279  PLTTESAMKKIEDNNTLVFivdiradkkkikdavkkMYDIQAKKVNTV  422
            PL  E+A+ K E+NNTLVFIVD RA+K++IK+AVK+MYDI   KVNT+
Sbjct  183  PLANETALAKTENNNTLVFIVDARANKRQIKEAVKRMYDIDCAKVNTL  230


>gi|7340796|emb|CAA62040.1|  Chloroplast ribosomal protein L23 [Spinacia oleracea]
Length=198

 Score = 51.2 bits (121),  Expect(2) = 2e-07
 Identities = 38/80 (47%), Positives = 55/80 (68%), Gaps = 6/80 (7%)
 Frame = +3

Query  183  RPKTLKKDRNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFivdiradkk  362
            +PKT KK +  KYPR        LD YQIL+ P+ TE+A+K I D N+L+F VD+RADKK
Sbjct  92   QPKTSKKAKKLKYPR------RILDVYQILQSPIITEAAIKNIADENSLLFTVDVRADKK  145

Query  363  kikdavkkMYDIQAKKVNTV  422
             I++A+   + ++ +KVNT+
Sbjct  146  MIREAISNFFGVKVRKVNTL  165


 Score = 22.7 bits (47),  Expect(2) = 2e-07
 Identities = 10/13 (76%), Positives = 10/13 (76%), Gaps = 0/13 (0%)
 Frame = +1

Query  406  RK*TPLIRPDGTK  444
            RK   LIRPDGTK
Sbjct  160  RKVNTLIRPDGTK  172


>gi|22331033|ref|NP_683557.1|  ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme 
[Arabidopsis thaliana]
Length=362

 Score = 30.0 bits (66),  Expect = 3.3
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 0/43 (0%)
 Frame = +2

Query  77   EGRSKGTGLEGCESSEIWSNF*EEGQEDPNKGYIPQAKDLEEG  205
            EGR KG G    +S +  +    E +ED ++  +P++K   EG
Sbjct  13   EGRDKGIGASSSDSDDDRAGSSTEQEEDESQNLVPESKPGSEG  55


>gi|8778557|gb|AAF79565.1|AC022464_23  F22G5.32 [Arabidopsis thaliana]
Length=576

 Score = 28.5 bits (62),  Expect = 9.5
 Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
 Frame = -1

Query  394  SYIFLTASFIFFLSARISTM---KTKVLLSSIFFIADSVVRGNLRI**WSSLFLGGALMR  224
            S ++L   F  F+S+ +S     K  ++L+SIFF+  +++  + +      + +GG ++ 
Sbjct  86   SSLYLAGIFASFISSYVSRAFGRKPTIMLASIFFLVGAILNLSAQ---ELGMLIGGRILL  142

Query  223  GY-LGFLSFFKVFGLWNVTFVRIFLAFFL  140
            G+ +GF +      L    ++  FL F L
Sbjct  143  GFGIGFGNQVSCQTLKTFFYLSGFLCFHL  171

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 307
Number of extensions: 7
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 445
Length of database: 101054579
Length adjustment: 103
Effective length of query: 342
Effective length of database: 71869632
Effective search space: 3234133440
Effective search space used: 3234133440
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 62 (28.5 bits)

Distribution of 32 Blast Hits on the Query Sequence