RID=1168945430-15788-213323612740.BLASTQ1, Contig330

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168945430-15788-213323612740.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig330
Length=542

Distribution of 15 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|20260522|gb|AAM13159.1|  unknown protein [Arabidopsis thali...   112    8e-25 
gi|12321838|gb|AAG50957.1|AC073943_7  hypothetical protein [Arabi   112    8e-25
gi|15217905|ref|NP_176117.1|  EMB1674 [Arabidopsis thaliana] >...   112    8e-25 
gi|115437206|ref|NP_001043237.1|  Os01g0530300 [Oryza sativa (...  69.3    8e-12 
gi|116309278|emb|CAH66369.1|  OSIGBa0130K07.5 [Oryza sativa (indi  68.9    1e-11
gi|115457836|ref|NP_001052518.1|  Os04g0347900 [Oryza sativa (...  68.9    1e-11 
gi|7413641|emb|CAB85989.1|  putative protein [Arabidopsis thalian  64.7    2e-10
gi|31745228|gb|AAP68888.1|  putative receptor-like kinase [Ory...  32.3    1.1   
gi|116059873|emb|CAL55580.1|  Protein required for S-phase ini...  30.4    4.1  
gi|37805898|dbj|BAC99747.1|  hypothetical protein [Oryza sativa (  30.4    4.1   
gi|37805899|dbj|BAC99748.1|  hypothetical protein [Oryza sativa (  30.0    5.3   
gi|108773103|ref|YP_636012.1|  ribosomal protein L5 [Scenedesm...  29.6    6.9   
gi|115475299|ref|NP_001061246.1|  Os08g0207600 [Oryza sativa (...  29.3    9.1   
gi|108773376|ref|YP_635838.1|  ribosomal protein L5 [Oltmannsi...  29.3    9.1   
gi|115464489|ref|NP_001055844.1|  Os05g0477900 [Oryza sativa (...  29.3    9.1

Alignments

 

>gi|20260522|gb|AAM13159.1|  unknown protein [Arabidopsis thaliana]
 gi|25083835|gb|AAN72124.1|  unknown protein [Arabidopsis thaliana]
Length=281

 Score =  112 bits (280),  Expect = 8e-25
 Identities = 57/128 (44%), Positives = 78/128 (60%), Gaps = 5/128 (3%)
 Frame = +2

Query  134  YKSDHPVAAATPLANLSLNFVLLHDWWLGRAQPRGLAIGGFECRGRQGQRVFCSAAIAKR  313
            + +  P+A  TP+   +L  V L DWWL + + + L I GFE  G  G R+F S  I+KR
Sbjct  48   FPTPFPLAVITPIK--TLKSVTLSDWWLTK-KGKDLCIKGFESNGASGVRLFSSGTISKR  104

Query  314  HDATTLETADGITVAISGFINTSRTHQNGFPLEFCSHFLYGFPYDWEEYASQYSNEEXAG  493
            H++TTLE  DGIT++I+GFIN SR  +NG  +E C+ F  GFPYDWE+Y  +   EE   
Sbjct  105  HESTTLEAIDGITISINGFINRSRCLENGISIEVCNRFRLGFPYDWEDYNEE--EEEKKK  162

Query  494  RGTQASID  517
            +    S D
Sbjct  163  KNVDISFD  170


>gi|12321838|gb|AAG50957.1|AC073943_7  hypothetical protein [Arabidopsis thaliana]
Length=1195

 Score =  112 bits (280),  Expect = 8e-25
 Identities = 57/128 (44%), Positives = 78/128 (60%), Gaps = 5/128 (3%)
 Frame = +2

Query  134  YKSDHPVAAATPLANLSLNFVLLHDWWLGRAQPRGLAIGGFECRGRQGQRVFCSAAIAKR  313
            + +  P+A  TP+   +L  V L DWWL + + + L I GFE  G  G R+F S  I+KR
Sbjct  48   FPTPFPLAVITPIK--TLKSVTLSDWWLTK-KGKDLCIKGFESNGASGVRLFSSGTISKR  104

Query  314  HDATTLETADGITVAISGFINTSRTHQNGFPLEFCSHFLYGFPYDWEEYASQYSNEEXAG  493
            H++TTLE  DGIT++I+GFIN SR  +NG  +E C+ F  GFPYDWE+Y  +   EE   
Sbjct  105  HESTTLEAIDGITISINGFINRSRCLENGISIEVCNRFRLGFPYDWEDYNEE--EEEKKK  162

Query  494  RGTQASID  517
            +    S D
Sbjct  163  KNVDISFD  170


>gi|15217905|ref|NP_176117.1|  EMB1674 [Arabidopsis thaliana]
 gi|12321382|gb|AAG50760.1|AC079131_5  hypothetical protein [Arabidopsis thaliana]
Length=1246

 Score =  112 bits (280),  Expect = 8e-25
 Identities = 57/128 (44%), Positives = 78/128 (60%), Gaps = 5/128 (3%)
 Frame = +2

Query  134  YKSDHPVAAATPLANLSLNFVLLHDWWLGRAQPRGLAIGGFECRGRQGQRVFCSAAIAKR  313
            + +  P+A  TP+   +L  V L DWWL + + + L I GFE  G  G R+F S  I+KR
Sbjct  48   FPTPFPLAVITPIK--TLKSVTLSDWWLTK-KGKDLCIKGFESNGASGVRLFSSGTISKR  104

Query  314  HDATTLETADGITVAISGFINTSRTHQNGFPLEFCSHFLYGFPYDWEEYASQYSNEEXAG  493
            H++TTLE  DGIT++I+GFIN SR  +NG  +E C+ F  GFPYDWE+Y  +   EE   
Sbjct  105  HESTTLEAIDGITISINGFINRSRCLENGISIEVCNRFRLGFPYDWEDYNEE--EEEKKK  162

Query  494  RGTQASID  517
            +    S D
Sbjct  163  KNVDISFD  170


>gi|115437206|ref|NP_001043237.1|  Os01g0530300 [Oryza sativa (japonica cultivar-group)]
 gi|113532768|dbj|BAF05151.1|  Os01g0530300 [Oryza sativa (japonica cultivar-group)]
Length=204

 Score = 69.3 bits (168),  Expect = 8e-12
 Identities = 45/116 (38%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
 Frame = +2

Query  128  KPYKSDHPVAAAT----PLANLSLNFVLLHDWWLGRAQP---RGLAIGGFECRGRQGQRV  286
            +P   D   AAA     P  +     V L DWWL R +    +   +G      R G+R 
Sbjct  4    QPRAGDGAAAAAAAKEAPAVSYLQACVELDDWWLERVEGEEGKVRVVGSNTTTSRAGRR-  62

Query  287  FCSAAIAKRHDATTLETADGITVAISGFINTSRTHQNGFPLEFCSHFLYGFPYDWE  454
            F SA+I  RH +  LET DGI + I+   N S+ H NGFP E   HF  GFP  WE
Sbjct  63   FTSASIKTRHASGDLETEDGIIIMIARPPNISKMHLNGFPDEVSKHFSLGFPVQWE  118


>gi|116309278|emb|CAH66369.1|  OSIGBa0130K07.5 [Oryza sativa (indica cultivar-group)]
Length=633

 Score = 68.9 bits (167),  Expect = 1e-11
 Identities = 39/91 (42%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
 Frame = +2

Query  194  VLLHDWWLGRAQ--PRGLAIGGFECRGRQGQRVFCSAAIAKRHDATTLETADGITVAISG  367
            V L DWWL R +   R + I G   R  +   +F SA I KRH A  LE  D I V I G
Sbjct  69   VELFDWWLKRVEGDDRKVRIAGHTERNHK-PHLFTSAPIVKRHKACMLEAEDSIIVLIDG  127

Query  368  FINTSRTHQNGFPLEFCSHFLYGFPYDWEEY  460
             ++ S+   NG+ LE C  F+ GFP  WE Y
Sbjct  128  PLDLSQMENNGYSLEVCEKFMTGFPCLWESY  158


>gi|115457836|ref|NP_001052518.1|  Os04g0347900 [Oryza sativa (japonica cultivar-group)]
 gi|38346496|emb|CAD40348.2|  OSJNBa0020I02.10 [Oryza sativa (japonica cultivar-group)]
 gi|113564089|dbj|BAF14432.1|  Os04g0347900 [Oryza sativa (japonica cultivar-group)]
Length=633

 Score = 68.9 bits (167),  Expect = 1e-11
 Identities = 39/91 (42%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
 Frame = +2

Query  194  VLLHDWWLGRAQ--PRGLAIGGFECRGRQGQRVFCSAAIAKRHDATTLETADGITVAISG  367
            V L DWWL R +   R + I G   R  +   +F SA I KRH A  LE  D I V I G
Sbjct  69   VELFDWWLKRVEGDDRKVRIAGHTERNHK-PHLFTSAPIVKRHKACMLEAEDSIIVLIDG  127

Query  368  FINTSRTHQNGFPLEFCSHFLYGFPYDWEEY  460
             ++ S+   NG+ LE C  F+ GFP  WE Y
Sbjct  128  PLDLSQMENNGYSLEVCEKFMTGFPCLWESY  158


>gi|7413641|emb|CAB85989.1|  putative protein [Arabidopsis thaliana]
Length=584

 Score = 64.7 bits (156),  Expect = 2e-10
 Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
 Frame = +2

Query  194  VLLHDWWLGRA----QPRGLAIGGFE-CRGRQGQRVFCSAAIAKRHDATTLETADGITVA  358
            V+L DWWL +     + +   + GFE     +  RVF S+ I K  D  TL  +DGI + 
Sbjct  19   VVLRDWWLIKCPKEFEGKQFGVAGFEESVETRAMRVFTSSPITKALDVFTLLASDGIYIT  78

Query  359  ISGFINTSRTHQNGFPLEFCSHFLYGFPYDWE  454
            + GF+N  R  +NGF  E    F++GFP  WE
Sbjct  79   LRGFLNKERVLKNGFNPEISREFIFGFPPCWE  110


>gi|31745228|gb|AAP68888.1|  putative receptor-like kinase [Oryza sativa (japonica cultivar-group)]
 gi|108711305|gb|ABF99100.1|  Protein kinase domain containing protein, expressed [Oryza sativa 
(japonica cultivar-group)]
Length=588

 Score = 32.3 bits (72),  Expect = 1.1
 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 14/66 (21%)
 Frame = -2

Query  166  SSGGDGVVRFIWFWRISC------------PSSPPHSDVLAATQ--PLRLWIPVTLCFTL  29
            S+G D    ++  W  S             PS PP     A+T+  P+++W+PV+L  T+
Sbjct  214  STGSDDTSHYVLGWSFSLSGIAQDLDYAKLPSLPPVMATAASTKHMPVKIWLPVSLSVTV  273

Query  28   SASVLV  11
             A++++
Sbjct  274  VAAIVM  279


>gi|116059873|emb|CAL55580.1|  Protein required for S-phase initiation or completion (ISS) [Ostreococcus 
tauri]
Length=594

 Score = 30.4 bits (67),  Expect = 4.1
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +1

Query  259  MQRETRTKSVLLCSHCQK-TRCHHS*DCGWHHSCNQWLHQYLSY  387
            ++RET  K V  CS CQK TR   S  C  H SC   +   + Y
Sbjct  473  LKRETNVK-VYHCSQCQKKTRFFDSSTCAGHRSCVTQIESIMRY  515


>gi|37805898|dbj|BAC99747.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=162

 Score = 30.4 bits (67),  Expect = 4.1
 Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 10/91 (10%)
 Frame = -3

Query  363  LIATVMPSAVSRVVASCLLAMAAEQNTLCPCLPLHSNPPI-------AKPLGCALPSHQS  205
            ++ T +PS+ S+    C  ++        P L + S+PP        A P G A  +  +
Sbjct  61   VVLTALPSSSSQHHRRCTASVGRPSAPSWPSLNVASSPPCVRTDLPRAAPTGGARAAAAA  120

Query  204  CNSTKLRDRLAR---GVAAATGWSDLYGFGE  121
             N    R  +A    G   A GW    GFGE
Sbjct  121  VNGDAARAMVAAGGWGWGGAGGWDREGGFGE  151


>gi|37805899|dbj|BAC99748.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=306

 Score = 30.0 bits (66),  Expect = 5.3
 Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
 Frame = -3

Query  225  ALPSHQSCNSTKLRDRLARGVA----AATGWSDLYGFGEYLVPLLLPIRMFWRQRNPCAS  58
            AL  HQ+ +  + R    RG A    AA     LYGFG+  VP  L  R  W    P A+
Sbjct  121  ALGGHQNAHKRE-RSLAKRGAAVAAAAAAAGRGLYGFGDPFVPHHLRFRSLWPY--PAAA  177

Query  57   G  55
            G
Sbjct  178  G  178


>gi|108773103|ref|YP_636012.1|  ribosomal protein L5 [Scenedesmus obliquus]
 gi|109893091|sp|Q1KVR2|RK5_SCEOB  Chloroplast 50S ribosomal protein L5
 gi|88696669|gb|ABD48295.1|  ribosomal protein L5 [Scenedesmus obliquus]
Length=180

 Score = 29.6 bits (65),  Expect = 6.9
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 0/50 (0%)
 Frame = -3

Query  246  IAKPLGCALPSHQSCNSTKLRDRLARGVAAATGWSDLYGFGEYLVPLLLP  97
            IA   G    S +S    K+RD++  GV+       +YGF + L+ L LP
Sbjct  61   IAGQKGVITRSKKSIAGFKIRDKMPVGVSVTLRGDRMYGFLDRLIHLALP  110


>gi|115475299|ref|NP_001061246.1|  Os08g0207600 [Oryza sativa (japonica cultivar-group)]
 gi|113623215|dbj|BAF23160.1|  Os08g0207600 [Oryza sativa (japonica cultivar-group)]
Length=210

 Score = 29.3 bits (64),  Expect = 9.1
 Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 12/77 (15%)
 Frame = +2

Query  56   PEAQGLRCRQNIRMGRRRGTRYSPKPYKSDHPVAAATPLANLSLNFVLLHDWWLGRAQPR  235
            P      CR++  +  RRG   +P P    HP  A  PL  L L F+ L          R
Sbjct  16   PPPPAAACRRHAPL--RRGPPPAPHPNPQPHPDGAPRPLHRLGLLFLRLR---------R  64

Query  236  GLAIGGFECRGRQGQRV  286
             L I G   R R G+R+
Sbjct  65   RLLI-GLRLRRRPGRRL  80


>gi|108773376|ref|YP_635838.1|  ribosomal protein L5 [Oltmannsiellopsis viridis]
 gi|109893088|sp|Q20F07|RK5_OLTVI  Chloroplast 50S ribosomal protein L5
 gi|82541958|gb|ABB81999.1|  ribosomal protein L5 [Oltmannsiellopsis viridis]
Length=180

 Score = 29.3 bits (64),  Expect = 9.1
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 0/67 (0%)
 Frame = -3

Query  297  AEQNTLCPCLPLHSNPPIAKPLGCALPSHQSCNSTKLRDRLARGVAAATGWSDLYGFGEY  118
            A QN       L+    IA   G    S ++    KLRD++A G++       +Y F + 
Sbjct  44   ASQNAKILDSSLNELSIIAGQRGVVTRSKKAIAGFKLRDKMAVGISVTLRGDRMYSFLDR  103

Query  117  LVPLLLP  97
            L+ L LP
Sbjct  104  LINLALP  110


>gi|115464489|ref|NP_001055844.1|  Os05g0477900 [Oryza sativa (japonica cultivar-group)]
 gi|46576003|gb|AAT01364.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113579395|dbj|BAF17758.1|  Os05g0477900 [Oryza sativa (japonica cultivar-group)]
Length=138

 Score = 29.3 bits (64),  Expect = 9.1
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 0/38 (0%)
 Frame = -3

Query  378  VLMKPLIATVMPSAVSRVVASCLLAMAAEQNTLCPCLP  265
            VL+  L+ +  P   + VVA   L+ +   NTL PCLP
Sbjct  15   VLVVVLVLSSPPGTSTVVVARAALSCSTVYNTLLPCLP  52

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 352
Number of extensions: 1
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 542
Length of database: 101054579
Length adjustment: 106
Effective length of query: 436
Effective length of database: 71019585
Effective search space: 5255449290
Effective search space used: 5255449290
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 64 (29.3 bits)