Header of the page

BLASTX 2.2.15 [Oct-15-2006] 
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168945479-4590-189705859251.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs
Taxonomy reports

Query=  Contig332
Length=464

Distribution of 32 Blast Hits on the Query Sequence


Related Structures

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|42407684|dbj|BAD08833.1|  putative 60S ribosomal protein L3...   125    5e-29 Gene info
gi|54111529|gb|AAV28627.1|  putative 60S ribosomal protein L31 [Z   124    1e-28 UniGene infoGene info
gi|37932221|gb|AAP72960.1|  putative ribosomal protein L31 [Lactu   123    2e-28
gi|56481111|gb|AAV92186.1|  60S ribosomal protein L31a [Pseudo...   121    9e-28
gi|6094052|sp|O65071|RL31_PICMA  60S ribosomal protein L31 >gi...   121    1e-27
gi|110590380|pdb|2GO5|6  Chain 6, Structure Of Signal Recognit...   119    4e-27 Related structures
gi|115448311|ref|NP_001047935.1|  Os02g0717800 [Oryza sativa (...   119    6e-27 Gene info
gi|14423898|sp|Q9M573|RL31_PERFR  60S ribosomal protein L31 >g...   119    6e-27
gi|115467818|ref|NP_001057508.1|  Os06g0319700 [Oryza sativa (...   117    2e-26 Gene info
gi|1173027|sp|P46290|RL31_NICGU  60S ribosomal protein L31 >gi...   117    2e-26
gi|15241902|ref|NP_200482.1|  structural constituent of riboso...   116    4e-26 UniGene infoGene info
gi|21553532|gb|AAM62625.1|  60S ribosomal protein L31 [Arabidopsi   115    5e-26 UniGene info
gi|89475536|gb|ABD73300.1|  ribosomal protein L31 [Panax ginseng]   114    1e-25
gi|15236157|ref|NP_194353.1|  structural constituent of riboso...   114    1e-25 UniGene infoGene info
gi|15224836|ref|NP_179564.1|  structural constituent of riboso...   114    2e-25 UniGene infoGene info
gi|14423899|sp|Q9MAV7|RL31_PANGI  60S ribosomal protein L31 >g...   111    1e-24
gi|115477176|ref|NP_001062184.1|  Os08g0505300 [Oryza sativa (...  82.8    5e-16 Gene info
gi|6440794|dbj|BAA78583.1|  60S ribosomal protein L31 [Chlamydomo  79.0    7e-15
gi|1173024|sp|P45841|RL31_CHLRE  60S ribosomal protein L31 >gi...  77.8    2e-14
gi|74272613|gb|ABA01102.1|  60S ribosomal protein L31 [Chlamydomo  76.3    5e-14
gi|2996164|gb|AAC32173.1|  putative 60S ribosomal protein L31 [Pi  63.2    4e-10
gi|2996162|gb|AAC32172.1|  putative 60S ribosomal protein L31 [Pi  63.2    4e-10
gi|6049118|gb|AAF02462.1|AF127445_1  putative 60S ribosomal prote  63.2    4e-10
gi|6049120|gb|AAF02463.1|AF127446_1  putative 60S ribosomal prote  63.2    4e-10
gi|37776907|emb|CAD23146.1|  ribosomal protein L31 [Oryza sativa]  46.6    4e-05 UniGene info
gi|116060100|emb|CAL56159.1|  60S ribosomal protein L31 (ISS) [Os  44.3    2e-04
gi|110743789|dbj|BAE99730.1|  kinesin like protein [Arabidopsis t  31.6    1.3  
gi|18414189|ref|NP_567426.1|  ATP binding / microtubule motor ...  31.6    1.3   UniGene infoGene info
gi|12214243|emb|CAC21601.1|  caffeic acid O-methyltransferase [Pi  31.6    1.3  
gi|92873678|gb|ABE82081.1|  hypothetical protein MtrDRAFT_AC13...  29.6    4.8  
gi|115489264|ref|NP_001067119.1|  Os12g0577900 [Oryza sativa (...  28.9    8.3   Gene info
gi|2244790|emb|CAB10212.1|  kinesin like protein [Arabidopsis ...  28.9    8.3
Alignments

>gi|42407684|dbj|BAD08833.1| Gene info putative 60S ribosomal protein L31 [Oryza sativa (japonica cultivar-group)]
 gi|42408913|dbj|BAD10170.1| Gene info putative 60S ribosomal protein L31 [Oryza sativa (japonica cultivar-group)]
Length=122

 Score =  125 bits (315),  Expect = 5e-29
 Identities = 91/104 (87%), Positives = 95/104 (91%), Gaps = 0/104 (0%)
 Frame = +1

Query  64   YTINLHKRSHGCTFkkkapkaikxirkFAQKAMGTTDVRVDVKLNKQVWSrgirsvprri  243
            YTINLHKR H CTFKKKAP AIK IRKFAQKAMGTTDVRVDVKLNK +WS GIRSVPRR+
Sbjct  19   YTINLHKRLHSCTFKKKAPNAIKEIRKFAQKAMGTTDVRVDVKLNKHIWSSGIRSVPRRV  78

Query  244  rvriarkrNDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDEXD  375
            RVRIARKRNDEEDAK E YSLVTVAE+PPEGLKGLGTKV+DE D
Sbjct  79   RVRIARKRNDEEDAKEELYSLVTVAEVPPEGLKGLGTKVVDETD  122


>gi|54111529|gb|AAV28627.1| UniGene infoGene info putative 60S ribosomal protein L31 [Zea mays]
Length=124

 Score =  124 bits (312),  Expect = 1e-28
 Identities = 90/104 (86%), Positives = 95/104 (91%), Gaps = 0/104 (0%)
 Frame = +1

Query  64   YTINLHKRSHGCTFkkkapkaikxirkFAQKAMGTTDVRVDVKLNKQVWSrgirsvprri  243
            YTINLHKR HGCTFKKKAP AIK IRKFAQKAMGTTD+R+DVKLNK +WS GIRSVPRR+
Sbjct  21   YTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDIRIDVKLNKHIWSSGIRSVPRRV  80

Query  244  rvriarkrNDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDEXD  375
            RVRIARKRNDEEDAK E YSLVTVAEIP EGLKGLGTKV+DE D
Sbjct  81   RVRIARKRNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD  124


>gi|37932221|gb|AAP72960.1|  putative ribosomal protein L31 [Lactuca sativa]
Length=120

 Score =  123 bits (309),  Expect = 2e-28
 Identities = 94/104 (90%), Positives = 97/104 (93%), Gaps = 0/104 (0%)
 Frame = +1

Query  64   YTINLHKRSHGCTFkkkapkaikxirkFAQKAMGTTDVRVDVKLNKQVWSrgirsvprri  243
            YTINLHKR HGCTFKKKAPKAIK IRKFAQKAMGTTDVRVDVKLNK VWSRGIRSVPRR+
Sbjct  17   YTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKYVWSRGIRSVPRRV  76

Query  244  rvriarkrNDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDEXD  375
            RVRIARKRND+EDAK E YSLVTVAEIP EGLKGLGTKVID+ D
Sbjct  77   RVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDED  120


>gi|56481111|gb|AAV92186.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481113|gb|AAV92187.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481115|gb|AAV92188.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481117|gb|AAV92189.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481119|gb|AAV92190.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481121|gb|AAV92191.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481123|gb|AAV92192.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481125|gb|AAV92193.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481127|gb|AAV92194.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481129|gb|AAV92195.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481131|gb|AAV92196.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481133|gb|AAV92197.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481135|gb|AAV92198.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481137|gb|AAV92199.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481139|gb|AAV92200.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481141|gb|AAV92201.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481143|gb|AAV92202.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481145|gb|AAV92203.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481147|gb|AAV92204.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481149|gb|AAV92205.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481151|gb|AAV92206.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481153|gb|AAV92207.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481155|gb|AAV92208.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481157|gb|AAV92209.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481159|gb|AAV92210.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481161|gb|AAV92211.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481163|gb|AAV92212.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
 gi|56481165|gb|AAV92213.1|  60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii]
Length=113

 Score =  121 bits (304),  Expect = 9e-28
 Identities = 87/104 (83%), Positives = 95/104 (91%), Gaps = 0/104 (0%)
 Frame = +1

Query  64   YTINLHKRSHGCTFkkkapkaikxirkFAQKAMGTTDVRVDVKLNKQVWSrgirsvprri  243
            YTINLHKR HGCTFKK APKA+K IRKFAQK MGTTDVR+DVKLNK VWSRGIRSVPRR+
Sbjct  10   YTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTTDVRLDVKLNKSVWSRGIRSVPRRM  69

Query  244  rvriarkrNDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDEXD  375
            RVRI+RKRNDEEDAK E YS+VTVAE+PPEGL GLGTKV++E D
Sbjct  70   RVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGLGTKVVEEED  113


>gi|6094052|sp|O65071|RL31_PICMA  60S ribosomal protein L31
 gi|2982295|gb|AAC32133.1|  probable 60S ribosomal protein L31 [Picea mariana]
Length=120

 Score =  121 bits (303),  Expect = 1e-27
 Identities = 87/104 (83%), Positives = 96/104 (92%), Gaps = 0/104 (0%)
 Frame = +1

Query  64   YTINLHKRSHGCTFkkkapkaikxirkFAQKAMGTTDVRVDVKLNKQVWSrgirsvprri  243
            YTINLH+R HGCTFKK APKA+K IRKFAQKAMGTTDVR+DVKLNK VWSRGIRSVPRR+
Sbjct  17   YTINLHRRLHGCTFKKMAPKAVKEIRKFAQKAMGTTDVRLDVKLNKAVWSRGIRSVPRRM  76

Query  244  rvriarkrNDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDEXD  375
            RVRI+RKRNDEEDAK E YS+VTVAE+PPEGL GLGTK+I+E D
Sbjct  77   RVRISRKRNDEEDAKDELYSIVTVAEVPPEGLTGLGTKIIEEED  120


>gi|110590380|pdb|2GO5|6 Related structures Chain 6, Structure Of Signal Recognition Particle Receptor (Sr) 
In Complex With Signal Recognition Particle (Srp) And Ribosome 
Nascent Chain Complex
 gi|119390383|pdb|2J37|6 Related structures Chain 6, Model Of Mammalian Srp Bound To 80s Rncs
Length=123

 Score =  119 bits (299),  Expect = 4e-27
 Identities = 86/104 (82%), Positives = 94/104 (90%), Gaps = 0/104 (0%)
 Frame = +1

Query  64   YTINLHKRSHGCTFkkkapkaikxirkFAQKAMGTTDVRVDVKLNKQVWSrgirsvprri  243
            YT+NLHKR HGCTFKKKAP AIK IRKFAQKAMGT DVR+DVKLNK +WS GIRSVPRR+
Sbjct  20   YTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGIRSVPRRV  79

Query  244  rvriarkrNDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDEXD  375
            RVRIARKRNDEEDAK E YSLVTVAE+P EGLKGLGTKV+++ D
Sbjct  80   RVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED  123


>gi|115448311|ref|NP_001047935.1| Gene info Os02g0717800 [Oryza sativa (japonica cultivar-group)]
 gi|45735864|dbj|BAD12898.1| Gene info putative 60S ribosomal protein L31 [Oryza sativa (japonica cultivar-group)]
 gi|113537466|dbj|BAF09849.1| Gene info Os02g0717800 [Oryza sativa (japonica cultivar-group)]
Length=123

 Score =  119 bits (297),  Expect = 6e-27
 Identities = 85/104 (81%), Positives = 95/104 (91%), Gaps = 0/104 (0%)
 Frame = +1

Query  64   YTINLHKRSHGCTFkkkapkaikxirkFAQKAMGTTDVRVDVKLNKQVWSrgirsvprri  243
            YTINLHKR HGCTFKKKAP AIK IRKFAQKAMGTTD+R+DVKLNK +W+ GIRSVPRR+
Sbjct  20   YTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDIRIDVKLNKAIWTNGIRSVPRRV  79

Query  244  rvriarkrNDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDEXD  375
            RVRI+RKRNDEEDAK E YSLVTVAEIP EGLKGLGTKV+++ +
Sbjct  80   RVRISRKRNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVEDEE  123


>gi|14423898|sp|Q9M573|RL31_PERFR  60S ribosomal protein L31
 gi|7229709|gb|AAF42953.1|AF237624_1  80S ribosomal protein L31 [Perilla frutescens]
Length=121

 Score =  119 bits (297),  Expect = 6e-27
 Identities = 92/104 (88%), Positives = 96/104 (92%), Gaps = 0/104 (0%)
 Frame = +1

Query  64   YTINLHKRSHGCTFkkkapkaikxirkFAQKAMGTTDVRVDVKLNKQVWSrgirsvprri  243
            YTINLHKR HGCTFKKKAPKAIK IRKFAQKAMGTTDVRVDVKLNK +WSRGIRSVPRRI
Sbjct  18   YTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRI  77

Query  244  rvriarkrNDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDEXD  375
            RVRIARKRND+EDAK E YSLVTVAEIP  GLKGLGT+VIDE +
Sbjct  78   RVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQVIDEEE  121


>gi|115467818|ref|NP_001057508.1| Gene info Os06g0319700 [Oryza sativa (japonica cultivar-group)]
 gi|54290930|dbj|BAD61612.1| Gene info putative 60S ribosomal protein L31 [Oryza sativa (japonica cultivar-group)]
 gi|113595548|dbj|BAF19422.1| Gene info Os06g0319700 [Oryza sativa (japonica cultivar-group)]
Length=124

 Score =  117 bits (293),  Expect = 2e-26
 Identities = 85/104 (81%), Positives = 94/104 (90%), Gaps = 0/104 (0%)
 Frame = +1

Query  64   YTINLHKRSHGCTFkkkapkaikxirkFAQKAMGTTDVRVDVKLNKQVWSrgirsvprri  243
            YTINLHKR HGCTFKKKAP AIK IRKFAQKAMGT DVRVDVKLNK +WS GIRSVPRR+
Sbjct  21   YTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTIDVRVDVKLNKHIWSSGIRSVPRRV  80

Query  244  rvriarkrNDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDEXD  375
            RVRIAR+RNDEEDAK E YSLVTVAE+P EGLKGLGTK++++ +
Sbjct  81   RVRIARRRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKLVEDDE  124


>gi|1173027|sp|P46290|RL31_NICGU  60S ribosomal protein L31
 gi|915313|gb|AAA80638.1|  ribosomal protein L31
Length=120

 Score =  117 bits (293),  Expect = 2e-26
 Identities = 88/104 (84%), Positives = 95/104 (91%), Gaps = 0/104 (0%)
 Frame = +1

Query  64   YTINLHKRSHGCTFkkkapkaikxirkFAQKAMGTTDVRVDVKLNKQVWSrgirsvprri  243
            YTINLHKR H CTFKKKAP AIK IRKFAQKAMGT DVRVDVKLNKQ+WSRGIRSVPRR+
Sbjct  17   YTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSRGIRSVPRRV  76

Query  244  rvriarkrNDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDEXD  375
            RVRIARKRND+EDAK E YSLVTVAEIP +GLKGLGTK+I++ D
Sbjct  77   RVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIEDED  120


>gi|15241902|ref|NP_200482.1| UniGene infoGene info structural constituent of ribosome [Arabidopsis thaliana]
 gi|19884146|sp|P51420|RL313_ARATH Gene info 60S ribosomal protein L31-3
 gi|10176775|dbj|BAB09889.1| Gene info 60S ribosomal protein L31 [Arabidopsis thaliana]
 gi|15215729|gb|AAK91410.1| UniGene infoGene info AT5g56710/MIK19_16 [Arabidopsis thaliana]
 gi|21700813|gb|AAM70530.1| UniGene infoGene info AT5g56710/MIK19_16 [Arabidopsis thaliana]
Length=119

 Score =  116 bits (290),  Expect = 4e-26
 Identities = 86/104 (82%), Positives = 94/104 (90%), Gaps = 0/104 (0%)
 Frame = +1

Query  64   YTINLHKRSHGCTFkkkapkaikxirkFAQKAMGTTDVRVDVKLNKQVWSrgirsvprri  243
            YTINLH+R H CTFKKKAPKAIK IRKFA+KAMGT DVRVDVKLNKQ+WS+GIR  PRRI
Sbjct  16   YTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSKGIRGPPRRI  75

Query  244  rvriarkrNDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDEXD  375
            RVR+ARKRND+EDAK EF+SLVTVAEIP EGL GLGTKVI+E D
Sbjct  76   RVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED  119


>gi|21553532|gb|AAM62625.1| UniGene info 60S ribosomal protein L31 [Arabidopsis thaliana]
Length=119

 Score =  115 bits (289),  Expect = 5e-26
 Identities = 85/104 (81%), Positives = 94/104 (90%), Gaps = 0/104 (0%)
 Frame = +1

Query  64   YTINLHKRSHGCTFkkkapkaikxirkFAQKAMGTTDVRVDVKLNKQVWSrgirsvprri  243
            YTINLH+R H CTFKKKAPKAIK IRKFA+KAMGT DVR+DVKLNKQ+WS+GIR  PRRI
Sbjct  16   YTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRIDVKLNKQIWSKGIRGPPRRI  75

Query  244  rvriarkrNDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDEXD  375
            RVR+ARKRND+EDAK EF+SLVTVAEIP EGL GLGTKVI+E D
Sbjct  76   RVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED  119


>gi|89475536|gb|ABD73300.1|  ribosomal protein L31 [Panax ginseng]
Length=121

 Score =  114 bits (286),  Expect = 1e-25
 Identities = 88/104 (84%), Positives = 95/104 (91%), Gaps = 1/104 (0%)
 Frame = +1

Query  64   YTINLHKRSHGCTFkkkapkaikxirkFAQKAMGTTDVRVDVKLNKQVWSrgirsvprri  243
            YTINLH+R HGCTFKKKAP AIK IRKFAQKAMGTTDVRVD KLNKQ+WSRGIRSVPRR+
Sbjct  18   YTINLHRRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRVDAKLNKQIWSRGIRSVPRRV  77

Query  244  rvriarkrNDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDEXD  375
            RVRIARKRNDEEDAK E YSLVTVA+  PEGLKGLGTK+ID+ +
Sbjct  78   RVRIARKRNDEEDAKEELYSLVTVAD-TPEGLKGLGTKIIDDEE  120


>gi|15236157|ref|NP_194353.1| UniGene infoGene info structural constituent of ribosome [Arabidopsis thaliana]
 gi|14423879|sp|Q9STR1|RL312_ARATH Gene info 60S ribosomal protein L31-2
 gi|4539419|emb|CAB38952.1| Gene info putative ribosomal protein [Arabidopsis thaliana]
 gi|7269474|emb|CAB79478.1| Gene info putative ribosomal protein [Arabidopsis thaliana]
 gi|21553368|gb|AAM62461.1| UniGene infoGene info putative ribosomal protein [Arabidopsis thaliana]
 gi|29028794|gb|AAO64776.1| UniGene infoGene info At4g26230 [Arabidopsis thaliana]
 gi|110736498|dbj|BAF00217.1| Gene info putative ribosomal protein [Arabidopsis thaliana]
Length=119

 Score =  114 bits (286),  Expect = 1e-25
 Identities = 84/104 (80%), Positives = 93/104 (89%), Gaps = 0/104 (0%)
 Frame = +1

Query  64   YTINLHKRSHGCTFkkkapkaikxirkFAQKAMGTTDVRVDVKLNKQVWSrgirsvprri  243
            YTINLH+R H CTFKKKAPKAIK IRKFA+K MGT DVRVDVKLNKQ+WS+GIR  PRRI
Sbjct  16   YTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIWSKGIRGPPRRI  75

Query  244  rvriarkrNDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDEXD  375
            RVR+ARKRND+EDAK EF+SLVTVAEIP EGL GLGTK+I+E D
Sbjct  76   RVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED  119


>gi|15224836|ref|NP_179564.1| UniGene infoGene info structural constituent of ribosome [Arabidopsis thaliana]
 gi|75266051|sp|Q9SLL7|RL311_ARATH Gene info 60S ribosomal protein L31-1
 gi|3687244|gb|AAC62142.1| Gene info 60S ribosomal protein L31 [Arabidopsis thaliana]
 gi|15450425|gb|AAK96506.1| UniGene infoGene info At2g19740/F6F22.23 [Arabidopsis thaliana]
 gi|15451072|gb|AAK96807.1| UniGene infoGene info 60S ribosomal protein L31 [Arabidopsis thaliana]
 gi|16974433|gb|AAL31220.1| UniGene infoGene info At2g19740/F6F22.23 [Arabidopsis thaliana]
 gi|18377416|gb|AAL66874.1| UniGene infoGene info 60S ribosomal protein L31 [Arabidopsis thaliana]
Length=119

 Score =  114 bits (284),  Expect = 2e-25
 Identities = 84/104 (80%), Positives = 92/104 (88%), Gaps = 0/104 (0%)
 Frame = +1

Query  64   YTINLHKRSHGCTFkkkapkaikxirkFAQKAMGTTDVRVDVKLNKQVWSrgirsvprri  243
            YTINLH+R H CTFKKKAP AIK IRKFA KAMGT DVRVDVKLNKQ+WS+GIR  PRRI
Sbjct  16   YTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLNKQIWSKGIRGPPRRI  75

Query  244  rvriarkrNDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDEXD  375
            RVR+ARKRND+EDAK EF+SLVTVAEIP EGL GLGTKVI+E +
Sbjct  76   RVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE  119


>gi|14423899|sp|Q9MAV7|RL31_PANGI  60S ribosomal protein L31
 gi|8131703|dbj|BAA96368.1|  ribosomal protein L31 [Panax ginseng]
Length=121

 Score =  111 bits (277),  Expect = 1e-24
 Identities = 86/104 (82%), Positives = 93/104 (89%), Gaps = 0/104 (0%)
 Frame = +1

Query  64   YTINLHKRSHGCTFkkkapkaikxirkFAQKAMGTTDVRVDVKLNKQVWSrgirsvprri  243
            YTINLHKR HGCTFKKKAP AIK IRKFAQKAMGT DVRVDVKLNKQ+WSRGIRSVPRR+
Sbjct  17   YTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSRGIRSVPRRV  76

Query  244  rvriarkrNDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDEXD  375
            RVRIARKRND+EDAK E YSLVTVA+IP   LKGLG ++I+E D
Sbjct  77   RVRIARKRNDDEDAKEELYSLVTVAKIPAGTLKGLGPQIIEEDD  120


>gi|115477176|ref|NP_001062184.1| Gene info Os08g0505300 [Oryza sativa (japonica cultivar-group)]
 gi|113624153|dbj|BAF24098.1| Gene info Os08g0505300 [Oryza sativa (japonica cultivar-group)]
Length=66

 Score = 82.8 bits (203),  Expect = 5e-16
 Identities = 57/66 (86%), Positives = 61/66 (92%), Gaps = 0/66 (0%)
 Frame = +1

Query  178  RVDVKLNKQVWSrgirsvprrirvriarkrNDEEDAKXEFYSLVTVAEIPPEGLKGLGTK  357
            RVDVKLNK +WS GIRSVPRR+RVRIARKRNDEEDAK E YSLVTVAE+PPEGLKGLGTK
Sbjct  1    RVDVKLNKHIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPPEGLKGLGTK  60

Query  358  VIDEXD  375
            V+DE D
Sbjct  61   VVDETD  66


>gi|6440794|dbj|BAA78583.1|  60S ribosomal protein L31 [Chlamydomonas sp. HS-5]
Length=116

 Score = 79.0 bits (193),  Expect = 7e-15
 Identities = 63/100 (63%), Positives = 81/100 (81%), Gaps = 2/100 (2%)
 Frame = +1

Query  64   YTINLHKRSHGCTFkkkapkaikxirkFAQKAMGTTDVRVDVKLNKQVWSrgirsvprri  243
            YTINLHKR H  TFKKKAPKA+K IR+FA K MGT+DVR+DVKLNK VWS+GI++VP R+
Sbjct  16   YTINLHKRCHKTTFKKKAPKAVKQIREFAMKMMGTSDVRLDVKLNKAVWSQGIKNVPTRV  75

Query  244  rvriarkrNDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVI  363
            R++++R+RND EDAK + Y+ VTVA+   +  KG GT V+
Sbjct  76   RIQVSRRRNDNEDAKEDMYAFVTVAD--DQTTKGKGTVVV  113


>gi|1173024|sp|P45841|RL31_CHLRE  60S ribosomal protein L31
 gi|18209|emb|CAA47044.1| UniGene info ribosomal protein L31 [Chlamydomonas reinhardtii]
Length=116

 Score = 77.8 bits (190),  Expect = 2e-14
 Identities = 64/102 (62%), Positives = 80/102 (78%), Gaps = 2/102 (1%)
 Frame = +1

Query  64   YTINLHKRSHGCTFkkkapkaikxirkFAQKAMGTTDVRVDVKLNKQVWSrgirsvprri  243
            YTI+L KR H  +FKK APKA+K IRKFA K MGT+DVR+DVKLNK VWS+GI++VP R+
Sbjct  16   YTIHLSKRLHKTSFKKCAPKAVKEIRKFASKVMGTSDVRLDVKLNKAVWSKGIKNVPTRL  75

Query  244  rvriarkrNDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDE  369
            R+ I+R+RND+EDAK E YS VTVAE   +  KG GT V+ +
Sbjct  76   RIVISRRRNDDEDAKEEMYSFVTVAE--DQSTKGKGTVVVQD  115


>gi|74272613|gb|ABA01102.1|  60S ribosomal protein L31 [Chlamydomonas incerta]
Length=116

 Score = 76.3 bits (186),  Expect = 5e-14
 Identities = 65/102 (63%), Positives = 79/102 (77%), Gaps = 2/102 (1%)
 Frame = +1

Query  64   YTINLHKRSHGCTFkkkapkaikxirkFAQKAMGTTDVRVDVKLNKQVWSrgirsvprri  243
            YTI+L KR    +FKK APKA+K IRKFA K MGTTDVR+DVKLNK VWS+GIR+VP R+
Sbjct  16   YTIHLSKRLQKTSFKKCAPKAVKEIRKFASKVMGTTDVRLDVKLNKAVWSKGIRNVPTRL  75

Query  244  rvriarkrNDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDE  369
            R+ I+R+RND+EDAK E YS VTVAE   +  KG GT V+ +
Sbjct  76   RIVISRRRNDDEDAKEEMYSFVTVAE--DQSTKGKGTVVVQD  115


>gi|2996164|gb|AAC32173.1|  putative 60S ribosomal protein L31 [Picea mariana]
Length=49

 Score = 63.2 bits (152),  Expect = 4e-10
 Identities = 28/36 (77%), Positives = 32/36 (88%), Gaps = 0/36 (0%)
 Frame = +1

Query  268  NDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDEXD  375
            NDEEDAK E YS+VTVAE+PPEGL GLGTK+I+E D
Sbjct  14   NDEEDAKDELYSIVTVAEVPPEGLTGLGTKIIEEED  49


>gi|2996162|gb|AAC32172.1|  putative 60S ribosomal protein L31 [Picea mariana]
Length=55

 Score = 63.2 bits (152),  Expect = 4e-10
 Identities = 28/36 (77%), Positives = 32/36 (88%), Gaps = 0/36 (0%)
 Frame = +1

Query  268  NDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDEXD  375
            NDEEDAK E YS+VTVAE+PPEGL GLGTK+I+E D
Sbjct  20   NDEEDAKDELYSIVTVAEVPPEGLTGLGTKIIEEED  55


>gi|6049118|gb|AAF02462.1|AF127445_1  putative 60S ribosomal protein L31 [Picea abies]
Length=52

 Score = 63.2 bits (152),  Expect = 4e-10
 Identities = 28/36 (77%), Positives = 32/36 (88%), Gaps = 0/36 (0%)
 Frame = +1

Query  268  NDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDEXD  375
            NDEEDAK E YS+VTVAE+PPEGL GLGTK+I+E D
Sbjct  17   NDEEDAKDELYSIVTVAEVPPEGLTGLGTKIIEEED  52


>gi|6049120|gb|AAF02463.1|AF127446_1  putative 60S ribosomal protein L31 [Picea abies]
Length=53

 Score = 63.2 bits (152),  Expect = 4e-10
 Identities = 28/36 (77%), Positives = 32/36 (88%), Gaps = 0/36 (0%)
 Frame = +1

Query  268  NDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVIDEXD  375
            NDEEDAK E YS+VTVAE+PPEGL GLGTK+I+E D
Sbjct  18   NDEEDAKDELYSIVTVAEVPPEGLTGLGTKIIEEED  53


>gi|37776907|emb|CAD23146.1| UniGene info ribosomal protein L31 [Oryza sativa]
Length=29

 Score = 46.6 bits (109),  Expect = 4e-05
 Identities = 20/28 (71%), Positives = 25/28 (89%), Gaps = 0/28 (0%)
 Frame = +1

Query  292  EFYSLVTVAEIPPEGLKGLGTKVIDEXD  375
            E YSLVTVAE+P EGLKGLGTKV+++ +
Sbjct  2    ELYSLVTVAEVPAEGLKGLGTKVVEDEE  29


>gi|116060100|emb|CAL56159.1|  60S ribosomal protein L31 (ISS) [Ostreococcus tauri]
Length=95

 Score = 44.3 bits (103),  Expect = 2e-04
 Identities = 37/94 (39%), Positives = 45/94 (47%), Gaps = 26/94 (27%)
 Frame = +1

Query  160  MGTTDVRVDVKLNKQVWSrgirsvprrirvriarkr------------------------  267
            M T+DVR+DVKLNK VWS+GIR+V        + K                         
Sbjct  1    MKTSDVRIDVKLNKAVWSKGIRNVRFERLSARSAKGRLTRFTFSSRAQVPKRIRVQISRK  60

Query  268  -NDEEDAKXEFYSLVTVAEIPPEGLKGLGTKVID  366
             ND +DA  + YS VTV +  P G  GLGT VID
Sbjct  61   HNDNKDADEDLYSYVTVVD-TPNGFSGLGTDVID  93


>gi|110743789|dbj|BAE99730.1|  kinesin like protein [Arabidopsis thaliana]
Length=869

 Score = 31.6 bits (70),  Expect = 1.3
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 0/33 (0%)
 Frame = -2

Query  358  PWFPTPSNPLEGSLQQLPESKTXPLHPLHRFSS  260
            P  P P NP+E  ++  P SK  P H +  FSS
Sbjct  819  PASPLPLNPIENMMEVTPISKVTPNHQVDEFSS  851


>gi|18414189|ref|NP_567426.1| UniGene infoGene info ATP binding / microtubule motor [Arabidopsis thaliana]
 gi|16973451|gb|AAL32293.1|AF320248_1 UniGene infoGene info phragmoplast-associated kinesin-related protein 2 [Arabidopsis 
thaliana]
 gi|16973453|gb|AAL32294.1|AF320249_1 Gene info phragmoplast-associated kinesin-related protein 2 [Arabidopsis 
thaliana]
Length=869

 Score = 31.6 bits (70),  Expect = 1.3
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 0/33 (0%)
 Frame = -2

Query  358  PWFPTPSNPLEGSLQQLPESKTXPLHPLHRFSS  260
            P  P P NP+E  ++  P SK  P H +  FSS
Sbjct  819  PASPLPLNPIENMMEVTPISKVTPNHQVDEFSS  851


>gi|12214243|emb|CAC21601.1|  caffeic acid O-methyltransferase [Pinus pinaster]
Length=315

 Score = 31.6 bits (70),  Expect = 1.3
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 0/50 (0%)
 Frame = +3

Query  201  ASMEPWDPKCAKENSCPHCKEEKR*RGCKGXVLLSGNCCRDPSRGFEGVG  350
            A M  W      +  C +C+EE   +  +G VL+  +CC D S     +G
Sbjct  249  AVMMKWILHDWADEECVNCREEATTQRSEGKVLVVSSCCGDKSEACRAIG  298


>gi|92873678|gb|ABE82081.1|  hypothetical protein MtrDRAFT_AC135796g16v1 [Medicago truncatula]
Length=542

 Score = 29.6 bits (65),  Expect = 4.8
 Identities = 18/64 (28%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
 Frame = -2

Query  388  VSYXSLXHQ*PWFPTPSNPLEGSLQQLPESKTXPLHPLHRFSSLQCGHEFSLAHFGSHGS  209
            V Y  + H+  W   P  P+    + L E     L    RF     G  F   HF  HG 
Sbjct  340  VFYAKVEHE--WVMQPGGPIAHQCKTLIEPNRLILLTAQRFIQTFLGRNFIALHFRRHGF  397

Query  208  ILAC  197
            +  C
Sbjct  398  LKFC  401


>gi|115489264|ref|NP_001067119.1| Gene info Os12g0577900 [Oryza sativa (japonica cultivar-group)]
 gi|113649626|dbj|BAF30138.1| Gene info Os12g0577900 [Oryza sativa (japonica cultivar-group)]
Length=357

 Score = 28.9 bits (63),  Expect = 8.3
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -2

Query  319  LQQLPESKTXPLHPLHRFSSLQCGHEFSLAHFGSH  215
            ++QLP +   PL P HR  S   GH+  L HF  H
Sbjct  117  VKQLPHASQLPL-PHHRRHSRVPGHDIPLRHFVEH  150


>gi|2244790|emb|CAB10212.1|  kinesin like protein [Arabidopsis thaliana]
 gi|7268138|emb|CAB78475.1|  kinesin like protein [Arabidopsis thaliana]
Length=959

 Score = 28.9 bits (63),  Expect = 8.3
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 6/51 (11%)
 Frame = -2

Query  358  PWFPTPSNPLEGSLQQLPESKTXPLHPL------HRFSSLQCGHEFSLAHF  224
            P  P P NP+E  ++  P SK  P H +       R       +  SL+HF
Sbjct  836  PASPLPLNPIENMMEVTPISKVTPNHQILLKTETERLGEADYINSLSLSHF  886







  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 192
Number of extensions: 1
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 464
Length of database: 101054579
Length adjustment: 103
Effective length of query: 361
Effective length of database: 71869632
Effective search space: 3665351232
Effective search space used: 3665351232
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 62 (28.5 bits)