Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168945502-22344-143419008653.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig333 Length=544
Score E Sequences producing significant alignments: (Bits) Value gi|11036950|gb|AAG27431.1| QM-like protein [Elaeis guineensis] 298 8e-81 gi|18203270|sp|Q9M5M7|RL10_EUPES 60S ribosomal protein L10 >g... 295 7e-80 gi|18203445|sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10 (Q... 295 7e-80 gi|92870109|gb|ABE79479.1| Ribosomal protein L10E [Medicago trun 295 9e-80 gi|50313215|gb|AAT74554.1| QM family protein [Caragana jubata] 295 9e-80 gi|49861132|gb|AAT68777.1| QM-like protein [Camellia sinensis] 293 2e-79 gi|115484761|ref|NP_001067524.1| Os11g0220800 [Oryza sativa (... 292 6e-79 gi|68449756|gb|AAY97865.1| 60S ribosomal protein L10 [Lycopersic 291 1e-78 gi|2500354|sp|P93847|RL10_SOLME 60S ribosomal protein L10 (EQ... 290 2e-78 gi|77999313|gb|ABB17003.1| 60S ribosomal protein L10-like protei 290 2e-78 gi|575355|emb|CAA57339.1| putative tumor suppresser [Oryza sa... 289 4e-78 gi|115462319|ref|NP_001054759.1| Os05g0169100 [Oryza sativa (... 286 2e-77 gi|18408550|ref|NP_564878.1| structural constituent of riboso... 285 5e-77 gi|30683726|ref|NP_563945.2| structural constituent of riboso... 285 7e-77 gi|15223382|ref|NP_174013.1| structural constituent of riboso... 284 2e-76 gi|1172809|sp|P45633|RL10_MAIZE 60S ribosomal protein L10 (QM... 283 2e-76 gi|32400770|gb|AAP80617.1|AF470356_1 QM [Triticum aestivum] 283 3e-76 gi|6093994|sp|O22431|RL10_PINTA 60S ribosomal protein L10 (Wi... 283 3e-76 gi|17682|emb|CAA78856.1| Wilm's tumor suppressor homologue [Arab 282 6e-76 gi|10443488|gb|AAG17477.1|AF106846_1 QM protein [Oryza sativa] 277 2e-74 gi|108707978|gb|ABF95773.1| 60S ribosomal protein L10, putati... 275 7e-74 gi|575357|emb|CAA57340.1| putative tumor supressor [Oryza sativa 275 7e-74 gi|115452833|ref|NP_001050017.1| Os03g0332500 [Oryza sativa (... 268 1e-71 gi|12322292|gb|AAG51174.1|AC079285_7 60S ribosomal protein L10, 210 3e-54 gi|1305525|gb|AAA99158.1| Wilms' tumor-related protein QM 184 2e-46 gi|1881378|dbj|BAA19414.1| QM family protein [Solanum melongena] 140 2e-33 gi|92867395|gb|ABE77705.1| Ribosomal protein L10E [Medicago trun 136 5e-32 gi|20312|emb|CAA45905.1| unknown [Oryza sativa (indica cultivar- 134 2e-31 gi|2500355|sp|Q40592|RL10_TOBAC 60S ribosomal protein L10 (QM... 132 6e-31 gi|14190449|gb|AAK55705.1|AF378902_1 At1g14320/F14L17_28 [Ara... 84.7 2e-16 gi|116056781|emb|CAL53070.1| 60s ribosomal protein L10 (ISS) [Os 77.8 2e-14 gi|37731958|gb|AAO72743.1| 60S ribosomal protein L10 [Pteris vit 77.8 2e-14 gi|116056782|emb|CAL53071.1| Predicted 3'-5' exonuclease (ISS) [ 45.1 2e-04 gi|4426935|gb|AAD20612.1| senescence-associated protein [Arabido 43.9 4e-04 gi|108773414|ref|YP_635933.1| ribosomal protein L16 [Helicosp... 32.3 1.1 gi|116060155|emb|CAL56214.1| unnamed protein product [Ostreococc 31.6 1.9 gi|14336650|gb|AAK61198.1| putative maturase [Mannia californica 31.6 1.9 gi|14336652|gb|AAK61199.1| putative maturase [Mannia capensis] 31.2 2.4 gi|15234034|ref|NP_192716.1| unknown protein [Arabidopsis tha... 30.8 3.2 gi|29893574|gb|AAP06828.1| putative anthraniliate synthase al... 30.4 4.1 gi|42573251|ref|NP_974722.1| unknown protein [Arabidopsis thalia 30.0 5.4 gi|18405153|ref|NP_030522.1| ATBPM3; protein binding [Arabido... 30.0 5.4 gi|21595740|gb|AAM66127.1| unknown [Arabidopsis thaliana] 30.0 5.4 gi|79324787|ref|NP_001031516.1| ATBPM3; protein binding [Arabido 30.0 5.4 gi|92887186|gb|ABE88704.1| Zinc finger, CCHC-type [Medicago trun 29.6 7.0 gi|15238426|ref|NP_201336.1| transcription factor [Arabidopsi... 29.6 7.0 gi|114217393|dbj|BAF31232.1| beta-D-galactosidase [Persea americ 29.3 9.2 gi|115485255|ref|NP_001067771.1| Os11g0423800 [Oryza sativa (... 29.3 9.2 gi|108864319|gb|ABA93105.2| Mitochondrial carrier protein, ex... 29.3 9.2 gi|33521216|gb|AAQ21370.1| beta-galactosidase [Sandersonia auran 29.3 9.2 gi|7939625|gb|AAF70825.1|AF154424_1 putative beta-galactosidase 29.3 9.2
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 437 Number of extensions: 25 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 544 Length of database: 101054579 Length adjustment: 106 Effective length of query: 438 Effective length of database: 71019585 Effective search space: 5326468875 Effective search space used: 5326468875 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)