Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168945568-9703-58856496773.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig337 Length=426
Score E Sequences producing significant alignments: (Bits) Value gi|15229489|ref|NP_189008.1| protein binding / transporter [A... 236 3e-62 gi|15912297|gb|AAL08282.1| At1g05520/T25N20_16 [Arabidopsis thal 229 2e-60 gi|8778725|gb|AAF79733.1|AC005106_14 T25N20.17 [Arabidopsis thal 229 2e-60 gi|18390535|ref|NP_563741.1| protein binding / transporter [A... 229 2e-60 gi|2244772|emb|CAB10195.1| transport protein [Arabidopsis tha... 219 3e-57 gi|22328614|ref|NP_193152.2| protein binding / transporter [A... 219 3e-57 gi|42572895|ref|NP_974544.1| protein binding / transporter [Arab 219 3e-57 gi|20147367|gb|AAM10394.1| AT4g14160/dl3120w [Arabidopsis thalia 216 2e-56 gi|30682731|ref|NP_849541.1| protein binding / transporter [Arab 214 6e-56 gi|115485309|ref|NP_001067798.1| Os11g0433500 [Oryza sativa (... 202 3e-52 gi|62734287|gb|AAX96396.1| At1g05520/T25N20_16 [Oryza sativa ... 202 3e-52 gi|115476868|ref|NP_001062030.1| Os08g0474700 [Oryza sativa (... 149 3e-36 gi|15226602|ref|NP_179757.1| protein binding / transporter [A... 140 1e-33 gi|116059721|emb|CAL55428.1| Vesicle coat complex COPII, subu... 125 7e-29 gi|116059352|emb|CAL55059.1| Vesicle coat complex COPII, subu... 123 3e-28 gi|115455257|ref|NP_001051229.1| Os03g0742800 [Oryza sativa (... 106 2e-23 gi|18422356|ref|NP_568626.1| protein binding / transporter [A... 105 5e-23 gi|9758550|dbj|BAB08946.1| protein transport protein SEC23 [Arab 105 5e-23 gi|115479587|ref|NP_001063387.1| Os09g0460200 [Oryza sativa (... 61.6 9e-10 gi|115436266|ref|NP_001042891.1| Os01g0321700 [Oryza sativa (... 31.6 1.0 gi|52075761|dbj|BAD44981.1| putative Sec23 protein [Oryza sativa 31.6 1.0 gi|86439947|dbj|BAE19786.2| dynein heavy chain 9 [Chlamydomonas 31.2 1.3 gi|2244802|emb|CAB10225.1| retrovirus-related like polyprotei... 29.3 5.0 gi|37780101|gb|AAP44434.1| resistance protein RGC2K [Lactuca ser 28.9 6.5 gi|37780097|gb|AAP44432.1| resistance protein RGC2K [Lactuca ... 28.9 6.5 gi|37780109|gb|AAP44438.1| resistance protein RGC2K [Lactuca ser 28.9 6.5 gi|37780119|gb|AAP44443.1| resistance protein RGC2K [Lactuca ser 28.9 6.5 gi|37780095|gb|AAP44431.1| resistance protein RGC2K [Lactuca ser 28.9 6.5 gi|37780093|gb|AAP44430.1| resistance protein RGC2K [Lactuca ser 28.9 6.5 gi|37780159|gb|AAP44463.1| resistance protein RGC2K [Lactuca ser 28.9 6.5 gi|37780111|gb|AAP44439.1| resistance protein RGC2K [Lactuca ser 28.9 6.5 gi|37780091|gb|AAP44429.1| resistance protein RGC2K [Lactuca ser 28.9 6.5 gi|34485378|gb|AAQ73128.1| resistance protein RGC2 [Lactuca sali 28.9 6.5 gi|92874850|gb|ABE83046.1| Somatotropin hormone [Medicago trunca 28.5 8.5 gi|15341548|gb|AAK95663.1|AF409954_1 alliinase [Allium fistulosu 28.5 8.5 gi|3319372|gb|AAC28221.1| similar to reverse transcriptases (... 28.5 8.5 gi|84514171|gb|ABC59094.1| cytochrome P450 monooxygenase CYP704G 28.5 8.5 gi|15223158|ref|NP_172303.1| EMB2284; 3'-5' exonuclease/ DNA ... 28.5 8.5
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 347 Number of extensions: 13 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 426 Length of database: 101054579 Length adjustment: 102 Effective length of query: 324 Effective length of database: 72152981 Effective search space: 2886119240 Effective search space used: 2886119240 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)