Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168930048-9286-80902275632.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig35 Length=407
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|6692816|dbj|BAA89423.1| allyl alcohol dehydrogenase [Nicotian 182 3e-46 gi|21554121|gb|AAM63201.1| quinone oxidoreductase-like protein [ 174 1e-43 gi|15237890|ref|NP_197201.1| oxidoreductase/ zinc ion binding... 174 1e-43 gi|886430|emb|CAA89262.1| zeta-crystallin homologue [Arabidopsis 174 1e-43 gi|115459206|ref|NP_001053203.1| Os04g0497000 [Oryza sativa (... 171 7e-43 gi|115441549|ref|NP_001045054.1| Os01g0891300 [Oryza sativa (... 169 2e-42 gi|115487892|ref|NP_001066433.1| Os12g0226900 [Oryza sativa (... 169 2e-42 gi|21593645|gb|AAM65612.1| allyl alcohol dehydrogenase, putative 169 4e-42 gi|15222685|ref|NP_173956.1| oxidoreductase/ zinc ion binding... 169 4e-42 gi|9755701|emb|CAC01713.1| quinone oxidoreductase-like protein [ 168 5e-42 gi|22326861|ref|NP_197202.2| oxidoreductase/ zinc ion binding... 168 5e-42 gi|17529140|gb|AAL38796.1| putative quinone oxidoreductase [Arab 168 5e-42 gi|15228456|ref|NP_186958.1| oxidoreductase/ zinc ion binding... 166 2e-41 gi|118138607|pdb|2J3H|A Chain A, Crystal Structure Of Arabido... 166 3e-41 gi|21539447|gb|AAM53276.1| quinone oxidoreductase-like protein [ 166 3e-41 gi|15237888|ref|NP_197199.1| oxidoreductase/ zinc ion binding... 166 3e-41 gi|115487890|ref|NP_001066432.1| Os12g0226700 [Oryza sativa (... 164 7e-41 gi|15237883|ref|NP_197198.1| oxidoreductase/ zinc ion binding... 164 1e-40 gi|21595408|gb|AAM66098.1| quinone oxidoreductase-like protein [ 164 1e-40 gi|115487894|ref|NP_001066434.1| Os12g0227400 [Oryza sativa (... 162 3e-40 gi|15240806|ref|NP_198610.1| oxidoreductase/ zinc ion binding... 161 7e-40 gi|15240810|ref|NP_198614.1| oxidoreductase/ zinc ion binding... 160 1e-39 gi|15240812|ref|NP_198616.1| oxidoreductase/ zinc ion binding... 160 2e-39 gi|21536967|gb|AAM61308.1| quinone oxidoreductase-like protein [ 159 4e-39 gi|108862360|gb|ABA96810.2| NADP-dependent oxidoreductase P1,... 157 1e-38 gi|115487884|ref|NP_001066429.1| Os12g0225900 [Oryza sativa (... 155 3e-38 gi|21537356|gb|AAM61697.1| quinone oxidoreductase-like protein [ 153 2e-37 gi|115484975|ref|NP_001067631.1| Os11g0255500 [Oryza sativa (... 153 2e-37 gi|62765876|gb|AAX99161.1| 2-alkenal reductase [Hordeum vulgare 153 2e-37 gi|62461976|gb|AAX83111.1| alcohol dehydrogenase-like protein [O 146 2e-35 gi|34559418|gb|AAQ75423.1| (+)-pulegone reductase [Mentha x pipe 144 1e-34 gi|21555641|gb|AAM63904.1| allyl alcohol dehydrogenase-like prot 140 2e-33 gi|7019678|emb|CAB75803.1| allyl alcohol dehydrogenase-like prot 139 4e-33 gi|18411352|ref|NP_567087.1| oxidoreductase/ zinc ion binding... 139 4e-33 gi|15218717|ref|NP_176734.1| oxidoreductase/ zinc ion binding [A 136 2e-32 gi|108862362|gb|ABG21926.1| oxidoreductase, zinc-binding dehy... 109 3e-24 gi|115487886|ref|NP_001066430.1| Os12g0226300 [Oryza sativa (... 108 6e-24 gi|2190553|gb|AAB60917.1| Strong similarity to Arabidopsis ze... 107 1e-23 gi|9755699|emb|CAC01711.1| quinone oxidoreductase-like protein [ 102 4e-22 gi|51090889|dbj|BAD35462.1| putative allyl alcohol dehydrogen... 102 4e-22 gi|30686126|ref|NP_197200.2| oxidoreductase/ zinc ion binding... 95.5 5e-20 gi|110816011|gb|ABG91753.1| phenylpropenal double-bond reductase 89.7 3e-18 gi|14335114|gb|AAK59836.1| At1g65560/F5I14_32 [Arabidopsis th... 53.1 3e-07 gi|77554022|gb|ABA96818.1| hypothetical protein LOC_Os12g1255... 33.9 0.003 gi|115487888|ref|NP_001066431.1| Os12g0226400 [Oryza sativa (... 32.7 0.40 gi|107770485|gb|ABF83899.1| constance-like protein [Lolium peren 31.6 0.89 gi|116830403|gb|ABK28159.1| unknown [Arabidopsis thaliana] 29.6 3.4 gi|15227012|ref|NP_178369.1| unknown protein [Arabidopsis tha... 29.6 3.4 gi|5420274|emb|CAB46641.1| cyclin A1 [Solanum lycopersicum] 29.3 4.4 gi|562190|gb|AAA51660.1| cyclin 29.3 4.4 gi|36789785|dbj|BAC92732.1| Hd1-like protein [Triticum aestiv... 29.3 4.4 gi|115488256|ref|NP_001066615.1| Os12g0298700 [Oryza sativa (... 28.9 5.7 gi|115435502|ref|NP_001042509.1| Os01g0233100 [Oryza sativa (... 28.9 5.7 gi|108862534|gb|ABG21984.1| Cyclin, N-terminal domain contain... 28.9 5.7 gi|108862533|gb|ABG21983.1| Cyclin, N-terminal domain contain... 28.9 5.7 gi|56783937|dbj|BAD81374.1| putative type A-like cyclin [Oryz... 28.9 5.7 gi|516550|gb|AAA20237.1| cyclin IIZm 28.9 5.7 gi|1665741|dbj|BAA11560.1| cyclin [Adiantum capillus-veneris] 28.9 5.7 gi|28208266|dbj|BAC56853.1| cyclin A1 [Silene latifolia] 28.9 5.7 gi|857397|dbj|BAA09466.1| mitotic cyclin a2-type [Glycine max] 28.9 5.7 gi|115435508|ref|NP_001042512.1| Os01g0233500 [Oryza sativa (... 28.9 5.7 gi|58294101|gb|AAW69993.1| putative wall-associated protein k... 28.1 9.8 gi|58294121|gb|AAW70003.1| putative wall-associated protein kina 28.1 9.8
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 255 Number of extensions: 4 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 407 Length of database: 101054579 Length adjustment: 100 Effective length of query: 307 Effective length of database: 72719679 Effective search space: 2545188765 Effective search space used: 2545188765 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)