RID=1169015178-6154-10714667036.BLASTQ1, Contig382

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169015178-6154-10714667036.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig382
Length=491

Distribution of 19 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|21593011|gb|AAM64960.1|  unknown [Arabidopsis thaliana]          165    9e-41 
gi|18402535|ref|NP_565711.1|  unknown protein [Arabidopsis tha...   163    2e-40 
gi|92874669|gb|ABE82903.1|  hypothetical protein MtrDRAFT_AC13...   156    4e-38
gi|115439111|ref|NP_001043835.1|  Os01g0673800 [Oryza sativa (...   120    2e-27 
gi|56201864|dbj|BAD73314.1|  unknown protein [Oryza sativa (ja...   120    2e-27
gi|116000573|emb|CAL50253.1|  Nuclear protein export factor (ISS)  32.0    1.1  
gi|15232692|ref|NP_188199.1|  unknown protein [Arabidopsis tha...  30.4    3.3   
gi|21592551|gb|AAM64500.1|  putative protein with poly glutami...  30.0    4.3   
gi|79327915|ref|NP_001031889.1|  unknown protein [Arabidopsis ...  29.6    5.6   
gi|18417858|ref|NP_568324.1|  unknown protein [Arabidopsis tha...  29.6    5.6   
gi|3176661|gb|AAC18785.1|AAC18785  Similar to putative DNA pol...  29.3    7.3  
gi|12324676|gb|AAG52299.1|AC011020_6  putative DNA polymerase ...  29.3    7.3  
gi|82408601|gb|ABB73106.1|  NADH dehydrogenase subunit F [Caseari  29.3    7.3  
gi|42563023|ref|NP_176917.2|  ATREV3; DNA binding [Arabidopsis...  29.3    7.3   
gi|497895|dbj|BAA02304.1|  transcription factor HBP-1a(c14) [Trit  29.3    7.3   
gi|116056480|emb|CAL52769.1|  unnamed protein product [Ostreococc  28.9    9.5  
gi|19072750|gb|AAL84620.1|AF474123_1  typical P-type R2R3 Myb pro  28.9    9.5  
gi|9802528|gb|AAF99730.1|AC004557_9  F17L21.11 [Arabidopsis thali  28.9    9.5  
gi|18396292|ref|NP_564276.1|  AHK3 (ARABIDOPSIS HISTIDINE KINA...  28.9    9.5

Alignments

 

>gi|21593011|gb|AAM64960.1|  unknown [Arabidopsis thaliana]
Length=350

 Score =  165 bits (417),  Expect = 9e-41
 Identities = 93/149 (62%), Positives = 114/149 (76%), Gaps = 5/149 (3%)
 Frame = +3

Query  24   MATLNYMPLRVSSTTAAFSQEQQAPNPRRTkiilpkkkplkWSTGVAPGEYGGPPATTKL  203
            MA L+Y  +  +STT    Q+Q   +   TKIILP KKP KWSTGVAPGEYGGPP TTKL
Sbjct  1    MAILSY--ISATSTTPPIPQDQSPNSRLPTKIILPNKKPEKWSTGVAPGEYGGPPTTTKL  58

Query  204  RKYWGGEEDDPLTSDDFIWNKDFVGRMKKLIQDPASADDSSLQPSPVKEEPSGFLSLNRV  383
            RKYWGGE++DP+TS D IWN+DF+ +MKKL  DP   +DSSL PSP KEE SGFLS +RV
Sbjct  59   RKYWGGEKEDPITSTDLIWNRDFMDQMKKLFDDP---NDSSLDPSPSKEESSGFLSFSRV  115

Query  384  MSLDSLDVDLSKELTAPSKXVLEQTVEST  470
            MSLDS+DVDLSKEL + SK V++  ++++
Sbjct  116  MSLDSMDVDLSKELASSSKSVVKNRLDTS  144


>gi|18402535|ref|NP_565711.1|  unknown protein [Arabidopsis thaliana]
 gi|3746067|gb|AAC63842.1|  expressed protein [Arabidopsis thaliana]
 gi|15215861|gb|AAK91474.1|  At2g31040/T16B12.15 [Arabidopsis thaliana]
 gi|19699268|gb|AAL91000.1|  At2g31040/T16B12.15 [Arabidopsis thaliana]
 gi|20197222|gb|AAM14978.1|  expressed protein [Arabidopsis thaliana]
Length=350

 Score =  163 bits (413),  Expect = 2e-40
 Identities = 92/149 (61%), Positives = 114/149 (76%), Gaps = 5/149 (3%)
 Frame = +3

Query  24   MATLNYMPLRVSSTTAAFSQEQQAPNPRRTkiilpkkkplkWSTGVAPGEYGGPPATTKL  203
            MA L+Y  +  +STT    Q+Q   +   TKIILP KKP KWSTGVAPGEYGGPP TTKL
Sbjct  1    MAILSY--ISATSTTPPIPQDQSPNSRLPTKIILPNKKPEKWSTGVAPGEYGGPPTTTKL  58

Query  204  RKYWGGEEDDPLTSDDFIWNKDFVGRMKKLIQDPASADDSSLQPSPVKEEPSGFLSLNRV  383
            RKYWGGE++DP+TS D IWN+DF+ +MKKL  DP   +DSSL PSP KE+ SGFLS +RV
Sbjct  59   RKYWGGEKEDPITSTDLIWNRDFMDQMKKLFDDP---NDSSLDPSPSKEKSSGFLSFSRV  115

Query  384  MSLDSLDVDLSKELTAPSKXVLEQTVEST  470
            MSLDS+DVDLSKEL + SK V++  ++++
Sbjct  116  MSLDSMDVDLSKELASSSKSVVKNRLDTS  144


>gi|92874669|gb|ABE82903.1|  hypothetical protein MtrDRAFT_AC135231g19v1 [Medicago truncatula]
Length=341

 Score =  156 bits (394),  Expect = 4e-38
 Identities = 90/159 (56%), Positives = 114/159 (71%), Gaps = 15/159 (9%)
 Frame = +3

Query  24   MATLNYMPLRVSSTTAAFSQEQQA----PNPRRTkiilpkkkplkWSTGVAPGEYGGPPA  191
            M  +NY    V+      SQ+  +    PNPR+TK+ILP KKP+KWSTG+APG+YGGPP 
Sbjct  1    MGIINYYNC-VTCAATPISQDSSSSPLQPNPRQTKVILPNKKPMKWSTGMAPGDYGGPPT  59

Query  192  TTKLRKYWGGEEDDPLTSDDFIWNKDFVGRMKKLIQDPASADDSSLQPSPVKEEPSGFLS  371
            TTKLRKYWGGE+ DPL SDD++WNKDFV   +++I  P        QPSP KE PSGFLS
Sbjct  60   TTKLRKYWGGEDPDPLASDDYLWNKDFVPHFERMIHPPE-------QPSPSKEVPSGFLS  112

Query  372  LNRVMSLDSLDVDLSKELTAPSKXVLEQTVESTTXSSGS  488
            LNRVMSLDS++VDLSKEL+AP   V++Q +E+   ++ S
Sbjct  113  LNRVMSLDSMEVDLSKELSAP---VVQQQIETPIIATES  148


>gi|115439111|ref|NP_001043835.1|  Os01g0673800 [Oryza sativa (japonica cultivar-group)]
 gi|56201865|dbj|BAD73315.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|56201918|dbj|BAD73368.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113533366|dbj|BAF05749.1|  Os01g0673800 [Oryza sativa (japonica cultivar-group)]
Length=311

 Score =  120 bits (302),  Expect = 2e-27
 Identities = 78/141 (55%), Positives = 100/141 (70%), Gaps = 4/141 (2%)
 Frame = +3

Query  57   SSTTAAFSQEQQAPNPRRTkiilpkkkplkWSTGVAPGEYGGPPATTKLRKYWGGEED-D  233
            S   AA +   Q    R  K+ILPKKKP KWSTG+APGEYGG PAT K RKYW G+ED D
Sbjct  23   SGEAAAAAAADQPAGRRPVKVILPKKKPQKWSTGMAPGEYGGGPATPKPRKYWMGKEDRD  82

Query  234  PL-TSDDFIWNKDFVGRMKKLIQDP-ASADDSSLQPSPVKEEP-SGFLSLNRVMSLDSLD  404
            P+  +DDFIWNKDF+  M+++I +  A    +  + +PV E+  SGFLS+NR MSLDS+D
Sbjct  83   PVGNTDDFIWNKDFLPHMERVIANGGADTPPTITRLTPVDEDSESGFLSINRAMSLDSVD  142

Query  405  VDLSKELTAPSKXVLEQTVES  467
            VDLSKEL AP++ +L+  VE+
Sbjct  143  VDLSKELQAPTRPILKTQVEA  163


>gi|56201864|dbj|BAD73314.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|56201917|dbj|BAD73367.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
Length=364

 Score =  120 bits (302),  Expect = 2e-27
 Identities = 78/141 (55%), Positives = 100/141 (70%), Gaps = 4/141 (2%)
 Frame = +3

Query  57   SSTTAAFSQEQQAPNPRRTkiilpkkkplkWSTGVAPGEYGGPPATTKLRKYWGGEED-D  233
            S   AA +   Q    R  K+ILPKKKP KWSTG+APGEYGG PAT K RKYW G+ED D
Sbjct  23   SGEAAAAAAADQPAGRRPVKVILPKKKPQKWSTGMAPGEYGGGPATPKPRKYWMGKEDRD  82

Query  234  PL-TSDDFIWNKDFVGRMKKLIQDP-ASADDSSLQPSPVKEEP-SGFLSLNRVMSLDSLD  404
            P+  +DDFIWNKDF+  M+++I +  A    +  + +PV E+  SGFLS+NR MSLDS+D
Sbjct  83   PVGNTDDFIWNKDFLPHMERVIANGGADTPPTITRLTPVDEDSESGFLSINRAMSLDSVD  142

Query  405  VDLSKELTAPSKXVLEQTVES  467
            VDLSKEL AP++ +L+  VE+
Sbjct  143  VDLSKELQAPTRPILKTQVEA  163


>gi|116000573|emb|CAL50253.1|  Nuclear protein export factor (ISS) [Ostreococcus tauri]
Length=1514

 Score = 32.0 bits (71),  Expect = 1.1
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 0/43 (0%)
 Frame = +3

Query  291   LIQDPASADDSSLQPSPVKEEPSGFLSLNRVMSLDSLDVDLSK  419
             L   PASA   S       +EP    S NR++ LDS+ +DLS+
Sbjct  1403  LTTTPASAPSQSTSRKRKLDEPDSRPSTNRIVELDSVPLDLSR  1445


>gi|15232692|ref|NP_188199.1|  unknown protein [Arabidopsis thaliana]
 gi|11994350|dbj|BAB02309.1|  unnamed protein product [Arabidopsis thaliana]
 gi|17065466|gb|AAL32887.1|  Unknown protein [Arabidopsis thaliana]
 gi|20148569|gb|AAM10175.1|  unknown protein [Arabidopsis thaliana]
Length=117

 Score = 30.4 bits (67),  Expect = 3.3
 Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 0/21 (0%)
 Frame = -2

Query  217  PQYLRSLVVAGGPPYSPGATP  155
            P+ LR L VAGGPP  PG  P
Sbjct  40   PRRLRRLAVAGGPPSPPGPDP  60


>gi|21592551|gb|AAM64500.1|  putative protein with poly glutamic acid stretch [Arabidopsis 
thaliana]
Length=339

 Score = 30.0 bits (66),  Expect = 4.3
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +3

Query  264  KDFVGRMKKL-IQDPASADDSSLQPSPVKEEPSGFLSLNRVMSLDSLDVDLSKELTAPSK  440
            K  VG  + + IQ   S D SS  PSP K  P    SL R +  D   VD++ ++    +
Sbjct  192  KKVVGMKRDVGIQSTTSVDLSSGSPSPAKTPPIMERSLKRHVEADDWQVDINLKVKGQQQ  251

Query  441  XV  446
             V
Sbjct  252  DV  253


>gi|79327915|ref|NP_001031889.1|  unknown protein [Arabidopsis thaliana]
 gi|9755649|emb|CAC01802.1|  putative protein with poly glutamic acid stretch [Arabidopsis 
thaliana]
Length=340

 Score = 29.6 bits (65),  Expect = 5.6
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +3

Query  264  KDFVGRMKKL-IQDPASADDSSLQPSPVKEEPSGFLSLNRVMSLDSLDVDLSKELTAPSK  440
            K  VG  + + IQ   S D SS  PSP K  P    SL R +  D   VD++ ++    +
Sbjct  193  KKVVGMKRDVGIQSTTSVDLSSGSPSPAKTPPIMERSLKRHVEADDWPVDINLKVKGQQQ  252

Query  441  XV  446
             V
Sbjct  253  DV  254


>gi|18417858|ref|NP_568324.1|  unknown protein [Arabidopsis thaliana]
 gi|20260502|gb|AAM13149.1|  unknown protein [Arabidopsis thaliana]
 gi|28059402|gb|AAO30055.1|  unknown protein [Arabidopsis thaliana]
Length=339

 Score = 29.6 bits (65),  Expect = 5.6
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +3

Query  264  KDFVGRMKKL-IQDPASADDSSLQPSPVKEEPSGFLSLNRVMSLDSLDVDLSKELTAPSK  440
            K  VG  + + IQ   S D SS  PSP K  P    SL R +  D   VD++ ++    +
Sbjct  192  KKVVGMKRDVGIQSTTSVDLSSGSPSPAKTPPIMERSLKRHVEADDWPVDINLKVKGQQQ  251

Query  441  XV  446
             V
Sbjct  252  DV  253


>gi|3176661|gb|AAC18785.1|AAC18785  Similar to putative DNA polymerase gb|M29683 from S. cerevisiae. 
[Arabidopsis thaliana]
Length=1894

 Score = 29.3 bits (64),  Expect = 7.3
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -3

Query  441  ALKVL*VPCSD----RHPDCXGS*LDLSLKIQKALP*QGRVEEK  322
            AL  L +PCS+     H    GS L LSL+++KAL  +G    K
Sbjct  66   ALPYLYIPCSEIPLEHHKGVDGSTLALSLELEKALKLKGNAASK  109


>gi|12324676|gb|AAG52299.1|AC011020_6  putative DNA polymerase zeta catalytic subunit [Arabidopsis thaliana]
Length=1871

 Score = 29.3 bits (64),  Expect = 7.3
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -3

Query  441  ALKVL*VPCSD----RHPDCXGS*LDLSLKIQKALP*QGRVEEK  322
            AL  L +PCS+     H    GS L LSL+++KAL  +G    K
Sbjct  66   ALPYLYIPCSEIPLEHHKGVDGSTLALSLELEKALKLKGNAASK  109


>gi|82408601|gb|ABB73106.1|  NADH dehydrogenase subunit F [Casearia obovalis]
Length=265

 Score = 29.3 bits (64),  Expect = 7.3
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +1

Query  199  SFASTGVVKKTTL*PL-MTSFGTRTSLVE*RSSFRTLLLPMTLL  327
            SF S G+VKK T   + + +FGT+ +    + S  T+L PM +L
Sbjct  86   SFQSGGIVKKMTCPSITINNFGTKINFSYPQESDNTILFPMLVL  129


>gi|42563023|ref|NP_176917.2|  ATREV3; DNA binding [Arabidopsis thaliana]
 gi|34330129|dbj|BAC82450.1|  catalytic subunit of polymerase zeta [Arabidopsis thaliana]
Length=1890

 Score = 29.3 bits (64),  Expect = 7.3
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -3

Query  441  ALKVL*VPCSD----RHPDCXGS*LDLSLKIQKALP*QGRVEEK  322
            AL  L +PCS+     H    GS L LSL+++KAL  +G    K
Sbjct  66   ALPYLYIPCSEIPLEHHKGVDGSTLALSLELEKALKLKGNAASK  109


>gi|497895|dbj|BAA02304.1|  transcription factor HBP-1a(c14) [Triticum aestivum]
Length=381

 Score = 29.3 bits (64),  Expect = 7.3
 Identities = 37/159 (23%), Positives = 59/159 (37%), Gaps = 11/159 (6%)
 Frame = +3

Query  15   WTAMATLNYMPLRVSSTTAAFSQEQQAPNPRRTkiilpkkkplkWSTGVAPGEYGGPPAT  194
            W+       +P     T  A+     AP+P+          P  W   + P  YG PP  
Sbjct  35   WSQFQAYYNVPGTTQMTPPAYFHSTVAPSPQ--------GHPYMWGPQMMP-PYGTPPPY  85

Query  195  TKLRKYWGGEEDDPLTSDDFIWNKDFVGRMKKLIQDPASADDSSLQPSPVKEEPSGFLSL  374
              +       +  P+      ++   V      +Q P S    S      K +    L  
Sbjct  86   ATMYAQGTPYQQAPMPPGSHPYSPYPVQAPNGTVQTPTSGAGGSETDKSNKNKRKTPLKR  145

Query  375  NRVMSLDSLDVDLSKELTAPSKXVLEQTVESTTXS-SGS  488
            ++  SL SLDV   K+ T P+K ++  + E ++ S SGS
Sbjct  146  SKG-SLGSLDVVTVKDKTPPAKPLVSSSNEGSSQSESGS  183


>gi|116056480|emb|CAL52769.1|  unnamed protein product [Ostreococcus tauri]
Length=501

 Score = 28.9 bits (63),  Expect = 9.5
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +1

Query  109  GPKSSCPRRSP----LNGQQAWLQGSMGARLQPPSFASTGVVKKTT  234
            G  SS P R+P      G  + + GS    +  PSF   G++ +TT
Sbjct  375  GGSSSSPSRTPDPGGFGGTSSAVHGSTAISITSPSFVPRGILNRTT  420


>gi|19072750|gb|AAL84620.1|AF474123_1  typical P-type R2R3 Myb protein [Zea mays]
Length=150

 Score = 28.9 bits (63),  Expect = 9.5
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
 Frame = +3

Query  195  TKLRKYWGGEEDDPLTSDDFIWNKDFVGRMKKLIQDPASADDSSLQPSPV---KEEPSGF  365
            +K+  +  G  D+ + +    WN     ++KK+  DP      S++PS +    EEP+GF
Sbjct  90   SKIASHLPGRTDNEIKNH---WNTHIKKKLKKMGIDPCDTQAHSIRPSFLLLPLEEPTGF  146

Query  366  L  368
            +
Sbjct  147  V  147


>gi|9802528|gb|AAF99730.1|AC004557_9  F17L21.11 [Arabidopsis thaliana]
Length=1092

 Score = 28.9 bits (63),  Expect = 9.5
 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 7/50 (14%)
 Frame = +3

Query  273  VGRMKKLIQDPASADD---SSLQPSPVKEEPSGFL----SLNRVMSLDSL  401
            + +M  L Q+P   DD    +L+PSPV+EE +  +    +++ V+SLD L
Sbjct  211  IRKMYSLEQNPVHKDDYDLEALEPSPVQEEYAPVIFAQDTVSHVVSLDML  260


>gi|18396292|ref|NP_564276.1|  AHK3 (ARABIDOPSIS HISTIDINE KINASE 3) [Arabidopsis thaliana]
 gi|13537198|dbj|BAB40775.1|  histidine kinase [Arabidopsis thaliana]
Length=1036

 Score = 28.9 bits (63),  Expect = 9.5
 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 7/50 (14%)
 Frame = +3

Query  273  VGRMKKLIQDPASADD---SSLQPSPVKEEPSGFL----SLNRVMSLDSL  401
            + +M  L Q+P   DD    +L+PSPV+EE +  +    +++ V+SLD L
Sbjct  211  IRKMYSLEQNPVHKDDYDLEALEPSPVQEEYAPVIFAQDTVSHVVSLDML  260

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 16, 2007  5:53 PM
  Number of letters in database: 101,065,385
  Number of sequences in database:  283,397
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283397
Number of Hits to DB: 280
Number of extensions: 8
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 491
Length of database: 101065385
Length adjustment: 104
Effective length of query: 387
Effective length of database: 71592097
Effective search space: 4223933723
Effective search space used: 4223933723
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 63 (28.9 bits)