RID=1169024694-7600-153543787072.BLASTQ1, Contig430

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169024694-7600-153543787072.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig430
Length=543

Distribution of 14 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|116830595|gb|ABK28255.1|  unknown [Arabidopsis thaliana]        57.0    5e-11
gi|18415413|ref|NP_567591.1|  unknown protein [Arabidopsis tha...  57.0    5e-11 
gi|115469422|ref|NP_001058310.1|  Os06g0666800 [Oryza sativa (...  50.4    4e-06 
gi|49387563|dbj|BAD25494.1|  hypothetical protein [Oryza sativ...  42.4    0.001 
gi|115475744|ref|NP_001061468.1|  Os08g0293100 [Oryza sativa (...  33.1    0.64  
gi|79330517|ref|NP_001032051.1|  unknown protein [Arabidopsis tha  32.7    0.83  
gi|15241281|ref|NP_199896.1|  unknown protein [Arabidopsis tha...  32.7    0.83  
gi|116830095|gb|ABK28005.1|  unknown [Arabidopsis thaliana]        32.0    1.4  
gi|98961969|gb|ABF59314.1|  unknown protein [Arabidopsis thaliana  32.0    1.4  
gi|113205155|gb|ABI34274.1|  IS10 transposase, putative [Lycopers  31.2    2.4  
gi|115439959|ref|NP_001044259.1|  Os01g0751400 [Oryza sativa (...  30.4    4.1   
gi|92876892|gb|ABE84177.1|  hypothetical protein MtrDRAFT_AC12...  30.0    5.4

Alignments

 

>gi|116830595|gb|ABK28255.1|  unknown [Arabidopsis thaliana]
Length=128

 Score = 57.0 bits (136),  Expect(2) = 5e-11
 Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
 Frame = +3

Query  243  TRSCCNCRCLARFMRKVKKQSKEMVRSAGASRQ-RSFQCRYDPLSYSLNFD  392
            T +CC   CLAR +RK+KK+ + ++ ++ A RQ  S QCRYDP+SYSLNFD
Sbjct  28   TPNCC-VTCLARLIRKLKKKGRLLLATSTARRQGSSLQCRYDPMSYSLNFD  77


 Score = 29.6 bits (65),  Expect(2) = 5e-11
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +2

Query  407  GSSVDDEDYY-QVYAFSSRVVANPRSXR  487
            G+  DDEDYY + YAFSSR V    + R
Sbjct  82   GTLPDDEDYYLRFYAFSSRYVTTTNNIR  109


>gi|18415413|ref|NP_567591.1|  unknown protein [Arabidopsis thaliana]
 gi|91805605|gb|ABE65531.1|  unknown [Arabidopsis thaliana]
Length=127

 Score = 57.0 bits (136),  Expect(2) = 5e-11
 Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
 Frame = +3

Query  243  TRSCCNCRCLARFMRKVKKQSKEMVRSAGASRQ-RSFQCRYDPLSYSLNFD  392
            T +CC   CLAR +RK+KK+ + ++ ++ A RQ  S QCRYDP+SYSLNFD
Sbjct  28   TPNCC-VTCLARLIRKLKKKGRLLLATSTARRQGSSLQCRYDPMSYSLNFD  77


 Score = 29.6 bits (65),  Expect(2) = 5e-11
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +2

Query  407  GSSVDDEDYY-QVYAFSSRVVANPRSXR  487
            G+  DDEDYY + YAFSSR V    + R
Sbjct  82   GTLPDDEDYYLRFYAFSSRYVTTTNNIR  109


>gi|115469422|ref|NP_001058310.1|  Os06g0666800 [Oryza sativa (japonica cultivar-group)]
 gi|52076530|dbj|BAD45407.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113596350|dbj|BAF20224.1|  Os06g0666800 [Oryza sativa (japonica cultivar-group)]
Length=102

 Score = 50.4 bits (119),  Expect = 4e-06
 Identities = 24/46 (52%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = +3

Query  270  LARFMRKVKKQSKEMVRSAGASRQ-RSFQCRYDPLSYSLNFDRSGL  404
            L R +RK+++QS+ M+ +A +SR   + +C+YDPLSY+ NFDRSGL
Sbjct  22   LGRLVRKLRRQSRMMLSTATSSRPPAAARCQYDPLSYARNFDRSGL  67


>gi|49387563|dbj|BAD25494.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
 gi|49388080|dbj|BAD25192.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=181

 Score = 42.4 bits (98),  Expect = 0.001
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
 Frame = +3

Query  261  CRC-LARFMRKVKKQSKEMVR--SAGASRQRSFQCRYDPLSYSLNFDRSGL  404
            C C L R +R++++Q+       +  +SR R  +C+YDPLSY+ NFDR G+
Sbjct  77   CGCGLGRLVRRLRRQAALCAARPAPASSRLRGGRCQYDPLSYARNFDRGGV  127


>gi|115475744|ref|NP_001061468.1|  Os08g0293100 [Oryza sativa (japonica cultivar-group)]
 gi|28564623|dbj|BAC57790.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|38175512|dbj|BAD01207.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113623437|dbj|BAF23382.1|  Os08g0293100 [Oryza sativa (japonica cultivar-group)]
Length=132

 Score = 33.1 bits (74),  Expect = 0.64
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 11/62 (17%)
 Frame = +3

Query  264  RCLARFMRKVKKQSKEMVRSAGASRQRSF-----------QCRYDPLSYSLNFDRSGLPG  410
            R  +R++R    +  EMV  AG  R++             + RYDP+SY+LNF+  G   
Sbjct  41   RTSSRWVRDRAVELPEMVALAGGRRRKPHLQHHQQQQLAGEFRYDPVSYALNFEEDGDGE  100

Query  411  AQ  416
            AQ
Sbjct  101  AQ  102


>gi|79330517|ref|NP_001032051.1|  unknown protein [Arabidopsis thaliana]
Length=282

 Score = 32.7 bits (73),  Expect = 0.83
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
 Frame = +2

Query  179  REHRDHKGHDGSNVLIGQKWDDKKLLQL*VSSKVHEEGEETEQGDGALRRSK*AKVIPVP  358
            R   + K    + VL G +   KK L    SS   E+GE+TE+ DG+L+ S  AKV P P
Sbjct  34   RRLEEMKKRSHAGVLKGSQTLSKKELLRHNSS---EDGEDTEENDGSLKAS--AKVAPAP  88

Query  359  V*SIE  373
              ++E
Sbjct  89   DHNVE  93


>gi|15241281|ref|NP_199896.1|  unknown protein [Arabidopsis thaliana]
 gi|9758530|dbj|BAB08906.1|  unnamed protein product [Arabidopsis thaliana]
 gi|28393689|gb|AAO42257.1|  unknown protein [Arabidopsis thaliana]
 gi|28973223|gb|AAO63936.1|  unknown protein [Arabidopsis thaliana]
Length=281

 Score = 32.7 bits (73),  Expect = 0.83
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
 Frame = +2

Query  179  REHRDHKGHDGSNVLIGQKWDDKKLLQL*VSSKVHEEGEETEQGDGALRRSK*AKVIPVP  358
            R   + K    + VL G +   KK L    SS   E+GE+TE+ DG+L+ S  AKV P P
Sbjct  34   RRLEEMKKRSHAGVLKGSQTLSKKELLRHNSS---EDGEDTEENDGSLKAS--AKVAPAP  88

Query  359  V*SIE  373
              ++E
Sbjct  89   DHNVE  93


>gi|116830095|gb|ABK28005.1|  unknown [Arabidopsis thaliana]
Length=79

 Score = 32.0 bits (71),  Expect = 1.4
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = +3

Query  276  RFMRKVKKQSKEMVRSAGASRQRSFQCRYDPLSYSLNFD  392
            ++ +K+ ++ K  V+     +Q  FQ  YDP SY+LNFD
Sbjct  12   QYRKKMFRRMKAAVKKTKKKKQTMFQ--YDPWSYALNFD  48


>gi|98961969|gb|ABF59314.1|  unknown protein [Arabidopsis thaliana]
Length=78

 Score = 32.0 bits (71),  Expect = 1.4
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = +3

Query  276  RFMRKVKKQSKEMVRSAGASRQRSFQCRYDPLSYSLNFD  392
            ++ +K+ ++ K  V+     +Q  FQ  YDP SY+LNFD
Sbjct  12   QYRKKMFRRMKAAVKKTKKKKQTMFQ--YDPWSYALNFD  48


>gi|113205155|gb|ABI34274.1|  IS10 transposase, putative [Lycopersicon esculentum]
Length=648

 Score = 31.2 bits (69),  Expect = 2.4
 Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = +3

Query  318  RSAGASRQRSFQCRYDPLSYSLNFD  392
            R+   +R   FQ  YDPLSYSLNFD
Sbjct  95   RNKSGNRNAKFQ--YDPLSYSLNFD  117


>gi|115439959|ref|NP_001044259.1|  Os01g0751400 [Oryza sativa (japonica cultivar-group)]
 gi|15623854|dbj|BAB67913.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
 gi|20160582|dbj|BAB89529.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
 gi|113533790|dbj|BAF06173.1|  Os01g0751400 [Oryza sativa (japonica cultivar-group)]
Length=150

 Score = 30.4 bits (67),  Expect = 4.1
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +3

Query  255  CNCRCLARFMRKVKKQSKEMVRSA---GASRQRSFQCRYDPLSYSLNFDRSGLPGA  413
            C  R   R +R++ ++++ +  S+   GA+  R     YD  SY+ NFD    P A
Sbjct  71   CGHRAWRRLLRRLAQETRCICSSSSPSGAASSRPITFGYDAASYAKNFDDGRRPAA  126


>gi|92876892|gb|ABE84177.1|  hypothetical protein MtrDRAFT_AC126010g6v1 [Medicago truncatula]
Length=123

 Score = 30.0 bits (66),  Expect = 5.4
 Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = +3

Query  318  RSAGASRQRSFQCRYDPLSYSLNFD  392
            R  G  +Q SFQ  YDP+SYS NFD
Sbjct  61   RILGGHKQISFQ--YDPISYSQNFD  83

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 16, 2007  5:53 PM
  Number of letters in database: 101,065,385
  Number of sequences in database:  283,397
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283397
Number of Hits to DB: 296
Number of extensions: 1
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 543
Length of database: 101065385
Length adjustment: 106
Effective length of query: 437
Effective length of database: 71025303
Effective search space: 5326897725
Effective search space used: 5326897725
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 64 (29.3 bits)