Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169024825-3237-206092350753.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig433 Length=501
Score E Sequences producing significant alignments: (Bits) Value gi|115439497|ref|NP_001044028.1| Os01g0708600 [Oryza sativa (... 93.2 4e-19 gi|15242926|ref|NP_200611.1| unknown protein [Arabidopsis tha... 90.1 4e-18 gi|4959712|gb|AAD34459.1|AF136010_1 SPP30 [Solanum chacoense] 88.6 1e-17 gi|116059274|emb|CAL54981.1| Transport protein particle (TRAP... 49.3 7e-06 gi|115469440|ref|NP_001058319.1| Os06g0669100 [Oryza sativa (... 28.9 10.0 gi|52075837|dbj|BAD45445.1| nucleotidyltransferase-like [Oryz... 28.9 10.0
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 16, 2007 5:53 PM Number of letters in database: 101,065,385 Number of sequences in database: 283,397 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283397 Number of Hits to DB: 318 Number of extensions: 1 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 501 Length of database: 101065385 Length adjustment: 105 Effective length of query: 396 Effective length of database: 71308700 Effective search space: 4421139400 Effective search space used: 4421139400 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)