Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169024863-4743-179980983010.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig435 Length=479
Score E Sequences producing significant alignments: (Bits) Value gi|6467503|gb|AAF13168.1|AF173900_1 granule bound starch synthas 291 6e-79 gi|68300904|gb|AAY89383.1| starch synthase isoform 2 [Nicotia... 287 1e-77 gi|15232051|ref|NP_186767.1| transferase, transferring glycos... 285 5e-77 gi|3192881|gb|AAC19119.1| starch synthase [Ipomoea batatas] 283 2e-76 gi|57015403|sp|Q43847|SSY2_SOLTU Granule-bound starch synthas... 281 6e-76 gi|47077343|dbj|BAD18846.1| starch synthase II precursor [Phaseo 280 2e-75 gi|77176914|gb|ABA64552.1| starch synthase II [Amaranthus cruent 268 9e-72 gi|47077345|dbj|BAD18847.1| starch synthase II-2 precursor [Phas 266 3e-71 gi|385412|gb|AAB26592.1| granule-bound starch synthase isofor... 262 5e-70 gi|2833384|sp|Q43093|SSG2_PEA Granule-bound starch synthase 2... 262 5e-70 gi|14495348|gb|AAK64284.1|AF383878_1 soluble starch synthase II- 256 2e-68 gi|115482170|ref|NP_001064678.1| Os10g0437600 [Oryza sativa (... 256 2e-68 gi|115448649|ref|NP_001048104.1| Os02g0744700 [Oryza sativa (... 255 4e-68 gi|73621959|sp|Q6Z2T8|SSY22_ORYSA Soluble starch synthase 2-2... 255 4e-68 gi|46390103|dbj|BAD15539.1| putative soluble starch synthase ... 255 4e-68 gi|15384987|emb|CAC59826.1| soluble starch synthase 2 [Oryza sat 255 4e-68 gi|15028467|gb|AAK81729.1|AF395537_1 soluble starch synthase II- 253 2e-67 gi|8953571|emb|CAB96626.1| starch synthase IIa-2 [Triticum ae... 250 1e-66 gi|5825480|gb|AAD53263.1|AF155217_1 starch synthase IIA [Triticu 249 3e-66 gi|8953573|emb|CAB96627.1| starch synthase IIa-3 [Triticum ae... 249 3e-66 gi|37905976|gb|AAP41030.1| soluble starch synthase II [Colocasia 248 7e-66 gi|23476275|gb|AAN28307.1| starch synthase II [Hordeum vulgare s 247 1e-65 gi|23476267|gb|AAN28309.1| starch synthase II [Hordeum vulgare s 247 1e-65 gi|23476265|gb|AAN28308.1| starch synthase II [Aegilops tauschii 246 2e-65 gi|1620660|gb|AAB17085.1| starch synthase 245 6e-65 gi|7529653|emb|CAB86618.1| starch synthase IIa-1 [Triticum aesti 245 6e-65 gi|82943648|dbj|BAE48800.1| starch synthase II-D [Triticum aesti 245 6e-65 gi|37694738|gb|AAQ99280.1| soluble starch synthase II [Oryza ... 242 5e-64 gi|60417787|dbj|BAD90593.1| starch synthase IIa [Oryza sativa... 242 5e-64 gi|115467234|ref|NP_001057216.1| Os06g0229800 [Oryza sativa (... 241 1e-63 gi|60417785|dbj|BAD90592.1| starch synthase IIa [Oryza sativa (j 240 1e-63 gi|2655031|gb|AAD13342.1| starch synthase isoform zSTSII-2 [Zea 240 1e-63 gi|46241866|gb|AAS77569.1| starch synthase IIa [Zea mays] 238 7e-63 gi|2655029|gb|AAD13341.1| starch synthase isoform zSTSII-1 [Zea 236 2e-62 gi|116055609|emb|CAL58277.1| soluble starch synthase II (IC) [Os 218 8e-57 gi|8708896|gb|AAC17970.2| soluble starch synthase [Chlamydomonas 205 7e-53 gi|6103327|gb|AAF03557.1| starch synthase I [Aegilops tauschii] 196 4e-50 gi|5880466|gb|AAD54661.1| starch synthase I [Triticum aestivum] 196 4e-50 gi|1373150|gb|AAB02197.1| soluble starch synthase 196 4e-50 gi|9369334|emb|CAB99209.1| starch synthase I-1 [Triticum aestivu 196 4e-50 gi|42560550|sp|Q43654|SSY1_WHEAT Starch synthase 1, chloropla... 196 4e-50 gi|51832613|gb|AAB99957.2| plastid starch synthase I precursor [ 195 5e-50 gi|6690399|gb|AAF24126.1|AF121673_1 soluble starch synthase [Ara 195 5e-50 gi|15237934|ref|NP_197818.1| transferase, transferring glycos... 195 5e-50 gi|7188796|gb|AAF37876.1|AF234163_1 starch synthase I [Hordeum v 195 7e-50 gi|2829792|sp|P93568|SSY1_SOLTU Soluble starch synthase 1, ch... 194 1e-49 gi|31745888|gb|AAP56350.1| soluble starch synthase I precurso... 193 2e-49 gi|115466564|ref|NP_001056881.1| Os06g0160700 [Oryza sativa (... 193 2e-49 gi|46360114|gb|AAS88880.1| SSII [Ostreococcus tauri] 190 2e-48 gi|27447607|gb|AAN37578.1| soluble starch synthase I [Colocasia 188 7e-48 gi|47077341|dbj|BAD18845.1| starch synthase I precursor [Phaseol 184 1e-46 gi|46360138|gb|AAS88892.1| SSI [Ostreococcus tauri] >gi|11606... 174 1e-43 gi|12019656|gb|AAD45815.2| soluble starch synthase [Sorghum bico 173 3e-43 gi|72140128|gb|AAZ66390.1| At5g24300 [Arabidopsis thaliana] >... 164 1e-40 gi|72140140|gb|AAZ66396.1| At5g24300 [Arabidopsis thaliana] >... 164 1e-40 gi|72140132|gb|AAZ66392.1| At5g24300 [Arabidopsis thaliana] 164 1e-40 gi|109940172|sp|Q40739|SSY1_ORYSA Soluble starch synthase 1, ... 164 2e-40 gi|450485|dbj|BAA03739.1| soluble starch synthase precursor [Ory 164 2e-40 gi|30698530|dbj|BAC76613.1| granule-bound starch synthase Ib pre 122 8e-28 gi|119710158|gb|ABL96300.1| granule-bound starch synthase [Glyci 120 2e-27 gi|15626365|emb|CAC69955.1| granule-bound starch synthase [Pisum 120 3e-27 gi|5441242|dbj|BAA82346.1| granule-bound starch synthase I [Phas 116 3e-26 gi|6136121|sp|O82627|SSG1_ANTMA Granule-bound starch synthase... 116 3e-26 gi|228210|prf||1718316A granule-bound starch synthase 115 6e-26 gi|602594|emb|CAA58220.1| starch (bacterial glycogen) synthase [ 115 9e-26 gi|267196|sp|Q00775|SSG1_SOLTU Granule-bound starch synthase ... 115 9e-26 gi|115448651|ref|NP_001048105.1| Os02g0744800 [Oryza sativa (... 114 1e-25 gi|2833388|sp|Q43784|SSG1_MANES Granule-bound starch synthase... 114 1e-25 gi|15983795|gb|AAL10494.1| At1g32900/F9L11_8 [Arabidopsis thalia 114 2e-25 gi|12003285|gb|AAG43519.1|AF210699_1 granule-bound starch syntha 114 2e-25 gi|15223331|ref|NP_174566.1| transferase, transferring glycos... 114 2e-25 gi|3832512|gb|AAC70779.1| granule-bound glycogen (starch) syn... 112 5e-25 gi|16755883|gb|AAL28128.1|AF433156_1 granule-bound starch syn... 111 1e-24 gi|22002428|dbj|BAC06486.1| granule bound starch synthase [Setar 109 4e-24 gi|1172159|gb|AAA86423.1| starch synthase [Ipomoea batatas] 109 4e-24 gi|3493101|gb|AAD03008.1| granule-bound starch synthase [Pennise 109 4e-24 gi|42560549|sp|Q42857|SSG1_IPOBA Granule-bound starch synthas... 109 4e-24 gi|22002468|dbj|BAC06488.1| granule bound starch synthase [Setar 109 4e-24 gi|33321025|gb|AAQ06271.1| granule-bound starch synthase precurs 109 5e-24 gi|19702245|gb|AAL93217.1| granule-bound starch synthase I [Clei 109 5e-24 gi|82478|pir||JQ0703 glycogen(starch) synthase (EC 2.4.1.11) - r 109 5e-24 gi|3493009|gb|AAD02962.1| granule-bound starch synthase [Coix aq 108 7e-24 gi|83375879|gb|ABC17781.1| waxy [Oryza barthii] 108 9e-24 gi|83375868|gb|ABC17777.1| waxy [Oryza rufipogon] 108 9e-24 gi|83375803|gb|ABC17745.1| waxy [Oryza sativa (japonica culti... 108 9e-24 gi|83375725|gb|ABC17707.1| waxy [Oryza sativa (indica cultiva... 108 9e-24 gi|83375733|gb|ABC17711.1| waxy [Oryza sativa (indica cultivar-g 108 9e-24 gi|83375873|gb|ABC17779.1| waxy [Oryza rufipogon] 108 9e-24 gi|83375792|gb|ABC17740.1| waxy [Oryza sativa (japonica cultivar 108 9e-24 gi|83375801|gb|ABC17744.1| waxy [Oryza sativa (japonica cultivar 108 9e-24 gi|83375723|gb|ABC17706.1| waxy [Oryza sativa (indica cultiva... 108 9e-24 gi|83375749|gb|ABC17719.1| waxy [Oryza sativa (indica cultiva... 108 9e-24 gi|89593588|gb|ABD77490.1| waxy [Oryza sativa (indica cultivar-g 108 9e-24 gi|46326772|gb|AAS88331.1| granule-bound starch synthase I [Coel 108 9e-24 gi|3493019|gb|AAD02967.1| granule-bound starch synthase [Cymbopo 108 9e-24 gi|7798551|gb|AAC61675.2| granule-bound starch synthase [Oryz... 108 9e-24 gi|8101497|gb|AAF72561.1|AF141954_1 granule-bound starch synt... 108 9e-24 gi|19911776|dbj|BAB88209.1| starch granule-bound starch synth... 108 9e-24 gi|2833382|sp|Q42968|SSG1_ORYGL Granule-bound starch synthase... 108 9e-24 gi|115466210|ref|NP_001056704.1| Os06g0133000 [Oryza sativa (... 108 9e-24
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 16, 2007 5:53 PM Number of letters in database: 101,065,385 Number of sequences in database: 283,397 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283397 Number of Hits to DB: 363 Number of extensions: 8 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 479 Length of database: 101065385 Length adjustment: 104 Effective length of query: 375 Effective length of database: 71592097 Effective search space: 3937565335 Effective search space used: 3937565335 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)