Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169025030-4278-192932175533.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig440 Length=452
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|12006845|gb|AAG44947.1|AF290620_1 putative PIP2 [Nicotiana gl 190 2e-48 gi|58700408|gb|AAW80918.1| putative plasma membrane intrinsic... 188 8e-48 gi|13486942|dbj|BAB40143.1| plasma membrane intrinsic protein 2- 187 1e-47 gi|57336896|emb|CAH60723.1| putative plasma membrane intrinsi... 187 2e-47 gi|28395418|gb|AAO39007.1| plasma intrinsic protein 2,1 [Juglans 186 2e-47 gi|28395420|gb|AAO39008.1| plasma intrinsic protein 2,2 [Juglans 186 2e-47 gi|15227302|ref|NP_179277.1| PIP2;8/PIP3B; water channel [Ara... 186 2e-47 gi|886100|gb|AAA69490.1| putative water channel protein; plas... 186 3e-47 gi|60498689|dbj|BAD90699.1| plasma membrane intrinsic protein 2; 186 4e-47 gi|1657948|gb|AAB18227.1| MipC [Mesembryanthemum crystallinum] 186 4e-47 gi|82568687|dbj|BAE48656.1| aquaporin [Prunus mume] 186 4e-47 gi|111379078|gb|ABH09326.1| putative aquaporin [Vitis vinifera] 185 5e-47 gi|55982653|gb|AAV69744.1| aquaporin [Vitis vinifera] 185 5e-47 gi|8071620|gb|AAF71816.1|AF141642_1 putative aquaporin PIP2-1 [V 185 5e-47 gi|13486938|dbj|BAB40141.1| plasma membrane intrinsic protein 2- 185 5e-47 gi|3158476|gb|AAC17529.1| aquaporin 2 [Samanea saman] 185 6e-47 gi|73761701|gb|AAZ83350.1| aquaporin [Gossypium hirsutum] 185 6e-47 gi|118132690|gb|ABK60196.1| PIP2 protein [Gossypium hirsutum] 184 8e-47 gi|17940742|gb|AAL49750.1|AF452012_1 aquaporin-like protein [Pet 184 1e-46 gi|38198154|emb|CAE53883.1| aquaporin [Ricinus communis] 183 2e-46 gi|9931530|gb|AAG02208.1|AF290201_1 plasma membrane intrinsic pr 182 3e-46 gi|60498693|dbj|BAD90701.1| plasma membrane intrinsic protein 2; 182 4e-46 gi|17940746|gb|AAL49752.1|AF452014_1 aquaporin-like protein [Pet 182 4e-46 gi|15231810|ref|NP_190910.1| PIP2A; water channel [Arabidopsi... 182 4e-46 gi|57336898|emb|CAH60724.1| putative plasma membrane intrinsi... 182 5e-46 gi|11119335|gb|AAG30607.1|AF314656_1 aquaporin [Brassica olerace 182 5e-46 gi|119514508|gb|ABL76066.1| aquaporin 2 [Bruguiera gymnorhiza] 181 7e-46 gi|111379080|gb|ABH09327.1| putative aquaporin [Vitis vinifera] 181 7e-46 gi|60498691|dbj|BAD90700.1| plasma membrane intrinsic protein 2; 181 7e-46 gi|15236267|ref|NP_195236.1| PIP3 (PLASMA MEMBRANE INTRINSIC ... 181 9e-46 gi|8071628|gb|AAF71820.1|AF141900_1 putative aquaporin PIP2-2 [V 181 1e-45 gi|82659447|gb|ABB88840.1| aquaporin [Stevia rebaudiana] 181 1e-45 gi|17017257|gb|AAL33586.1|AF440272_1 aquaporin [Nicotiana tabacu 180 2e-45 gi|115447423|ref|NP_001047491.1| Os02g0629200 [Oryza sativa (... 179 3e-45 gi|85036237|gb|ABC69040.1| aquaporin PIP2-1 [Rhododendron catawb 179 3e-45 gi|83283953|gb|ABC01884.1| plasma membrane intrinsic protein ... 179 5e-45 gi|1402833|gb|AAB67868.1| plasma membrane major intrinsic protei 178 6e-45 gi|78191436|gb|ABB29939.1| major intrinsic protein 2-like [Solan 177 1e-44 gi|7209562|dbj|BAA92261.1| Plasma membrane aquaporin 2c [Raphanu 177 1e-44 gi|104391599|gb|ABB13430.2| plasma membrane intrinsic protein [O 177 1e-44 gi|85822145|gb|ABC84558.1| aquaporin PIP2 [Vitis vinifera] 177 1e-44 gi|7209560|dbj|BAA92260.1| Plasma membrane aquaporin 2b [Raphanu 177 1e-44 gi|472879|emb|CAA53478.1| plasma membrane intrinsic protein 2b [ 177 2e-44 gi|5081421|gb|AAD39373.1|AF118382_1 plasma membrane intrinsic pr 177 2e-44 gi|21554356|gb|AAM63463.1| aquaporin (plasma membrane intrins... 177 2e-44 gi|21537097|gb|AAM61438.1| aquaporin (plasma membrane intrins... 177 2e-44 gi|15228095|ref|NP_181254.1| PIP2B; water channel [Arabidopsi... 177 2e-44 gi|115471893|ref|NP_001059545.1| Os07g0448800 [Oryza sativa (... 177 2e-44 gi|60498687|dbj|BAD90698.1| plasma membrane intrinsic protein 2; 176 2e-44 gi|29650727|gb|AAO86707.1| aquaporin [Zea mays] 176 2e-44 gi|13447807|gb|AAK26761.1| plasma membrane integral protein ZmPI 176 2e-44 gi|13447805|gb|AAK26760.1| plasma membrane integral protein ZmPI 176 2e-44 gi|13447801|gb|AAK26758.1| plasma membrane integral protein ZmPI 176 2e-44 gi|7381267|gb|AAF61463.1|AF139814_1 plasma membrane intrinsic pr 176 2e-44 gi|15228096|ref|NP_181255.1| RD28; water channel [Arabidopsis... 176 2e-44 gi|5081423|gb|AAD39374.1|AF118383_1 plasma membrane intrinsic pr 176 3e-44 gi|3135543|gb|AAC16545.1| aquaporin [Oryza sativa] 176 4e-44 gi|15233102|ref|NP_191042.1| PIP2;5/PIP2D; water channel [Ara... 176 4e-44 gi|1688296|gb|AAB36949.1| plasma membrane intrinsic protein PIP3 175 5e-44 gi|2306917|gb|AAB65787.1| plasma membrane intrinsic protein [Ara 175 5e-44 gi|57336892|emb|CAH60721.1| putative plasma membrane intrinsi... 175 7e-44 gi|4884864|gb|AAD31846.1|AF133530_1 water channel protein MipH [ 175 7e-44 gi|13447803|gb|AAK26759.1| plasma membrane integral protein ZmPI 175 7e-44 gi|115459470|ref|NP_001053335.1| Os04g0521100 [Oryza sativa (... 175 7e-44 gi|5139539|emb|CAB45651.1| putative plasma membrane intrinsic pr 174 9e-44 gi|1657950|gb|AAB18228.1| MipE [Mesembryanthemum crystallinum] 174 9e-44 gi|13447811|gb|AAK26763.1| plasma membrane integral protein ZmPI 174 9e-44 gi|87240949|gb|ABD32807.1| Major intrinsic protein [Medicago tru 174 9e-44 gi|62546339|gb|AAX86046.1| PIP2,2 [Glycine max] 174 9e-44 gi|68299599|dbj|BAE02729.1| PIP aquaporin [Hordeum vulgare] 174 9e-44 gi|115334277|dbj|BAF33069.1| aquaporin [Hordeum vulgare] 174 1e-43 gi|56131022|gb|AAV80229.1| aquaporin 2 [Aegiceras corniculatum] 174 1e-43 gi|17025878|gb|AAL32127.1| aquaporin [Medicago truncatula] 174 1e-43 gi|18076470|emb|CAC82712.1| major intrinsic protein 1 [Populu... 174 1e-43 gi|7381269|gb|AAF61464.1|AF139815_1 plasma membrane intrinsic pr 174 1e-43 gi|115457384|ref|NP_001052292.1| Os04g0233400 [Oryza sativa (... 174 1e-43 gi|1402835|gb|AAB67869.1| plasma membrane major intrinsic protei 174 1e-43 gi|3551133|dbj|BAA32778.1| Plasma membrane aquaporin (PAQ2) [Rap 174 1e-43 gi|1168480|sp|P42767|PIP1_ATRCA Aquaporin PIP-type >gi|604477|gb 174 1e-43 gi|114841679|dbj|BAF32141.1| putative aquaporin [Taxodium distic 173 2e-43 gi|45643633|gb|AAS72892.1| plasma membrane aquaporin [Physcomitr 173 3e-43 gi|62945921|gb|AAY22203.1| putative aquaporin [Phaseolus vulgari 173 3e-43 gi|114841481|dbj|BAF32042.1| putative aquaporin [Cryptomeria ... 172 3e-43 gi|57336890|emb|CAH60720.1| putative plasma membrane intrinsi... 172 3e-43 gi|2662310|dbj|BAA23744.1| HvPIP2;1 [Hordeum vulgare subsp. vulg 172 3e-43 gi|2982239|gb|AAC32107.1| probable aquaporin [Picea mariana] 172 4e-43 gi|68533200|dbj|BAE06148.1| PIP aquaporin isoform [Hordeum vulga 172 4e-43 gi|13447809|gb|AAK26762.1| plasma membrane integral protein ZmPI 172 6e-43 gi|4741931|gb|AAD28761.1| plasma membrane intrinsic protein [... 172 6e-43 gi|7649310|gb|AAF65845.1|AF255795_1 aquaporin 1 [Allium cepa] 171 7e-43 gi|45643635|gb|AAS72893.1| plasma membrane aquaporin [Physcomitr 171 1e-42 gi|45476710|gb|AAS65964.1| aquaporin PIP 2 [Physcomitrella paten 171 1e-42 gi|60498685|dbj|BAD90697.1| plasma membrane intrinsic protein 2; 171 1e-42 gi|115471887|ref|NP_001059542.1| Os07g0448100 [Oryza sativa (... 171 1e-42 gi|67937804|gb|AAY83358.1| plasma membrane aquaporin [Physcomitr 169 3e-42 gi|15224999|ref|NP_181434.1| PIP2;6/PIP2E; water channel [Ara... 169 5e-42 gi|85544225|pdb|2B5F|A Chain A, Crystal Structure Of The Spin... 167 1e-41 gi|85544014|pdb|1Z98|A Chain A, Crystal Structure Of The Spin... 167 1e-41 gi|75299340|sp|Q8GRI8|PIP25_ORYSA Aquaporin PIP2.5 (Plasma me... 167 1e-41 gi|2765748|emb|CAB07783.1| PaMip-2 [Picea abies] 167 2e-41
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 16, 2007 5:53 PM Number of letters in database: 101,065,385 Number of sequences in database: 283,397 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283397 Number of Hits to DB: 276 Number of extensions: 0 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 452 Length of database: 101065385 Length adjustment: 103 Effective length of query: 349 Effective length of database: 71875494 Effective search space: 3378148218 Effective search space used: 3378148218 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 62 (28.5 bits)