Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168930689-594-127138257763.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig48 Length=533
Score E Sequences producing significant alignments: (Bits) Value gi|15235443|ref|NP_193002.1| transporter [Arabidopsis thalian... 249 5e-66 gi|51969536|dbj|BAD43460.1| putative protein [Arabidopsis tha... 249 5e-66 gi|51970126|dbj|BAD43755.1| putative protein [Arabidopsis thalia 243 3e-64 gi|115477084|ref|NP_001062138.1| Os08g0496900 [Oryza sativa (... 241 1e-63 gi|115462311|ref|NP_001054755.1| Os05g0168500 [Oryza sativa (... 238 7e-63 gi|115448371|ref|NP_001047965.1| Os02g0722300 [Oryza sativa (... 233 4e-61 gi|115449239|ref|NP_001048399.1| Os02g0797700 [Oryza sativa (... 229 3e-60 gi|20466566|gb|AAM20600.1| putative protein [Arabidopsis thal... 228 1e-59 gi|15238407|ref|NP_198366.1| transporter [Arabidopsis thaliana] 228 1e-59 gi|10176814|dbj|BAB10022.1| endosomal protein-like [Arabidopsis 228 1e-59 gi|38175639|dbj|BAD01346.1| endosomal protein-like [Oryza sat... 175 1e-49 gi|92897792|gb|ABE93901.1| Nonaspanin (TM9SF) [Medicago truncatu 147 1e-38 gi|53791995|dbj|BAD54580.1| putative PHG1A protein [Oryza sat... 146 3e-38 gi|115468604|ref|NP_001057901.1| Os06g0568000 [Oryza sativa (... 146 3e-38 gi|4115377|gb|AAD03378.1| putative multispanning membrane protei 145 4e-37 gi|30682320|ref|NP_179994.2| transporter [Arabidopsis thalian... 145 4e-37 gi|30683350|ref|NP_196645.2| transporter [Arabidopsis thaliana] 143 2e-36 gi|8979718|emb|CAB96839.1| putative protein [Arabidopsis thalian 143 2e-36 gi|115477747|ref|NP_001062469.1| Os08g0555200 [Oryza sativa (... 144 6e-36 gi|115469246|ref|NP_001058222.1| Os06g0650600 [Oryza sativa (... 139 1e-35 gi|18420880|ref|NP_568465.1| transporter [Arabidopsis thalian... 139 3e-35 gi|15221996|ref|NP_175909.1| transporter [Arabidopsis thalian... 142 3e-35 gi|27754304|gb|AAO22605.1| putative endomembrane protein 70 [Ara 142 3e-35 gi|110737753|dbj|BAF00815.1| putative multispanning membrane pro 146 4e-35 gi|15231359|ref|NP_187991.1| transporter [Arabidopsis thalian... 146 4e-35 gi|115477743|ref|NP_001062467.1| Os08g0554900 [Oryza sativa (... 143 4e-35 gi|42407450|dbj|BAD10383.1| putative PHG1A protein [Oryza sat... 143 4e-35 gi|115477745|ref|NP_001062468.1| Os08g0555000 [Oryza sativa (... 143 4e-35 gi|116000559|emb|CAL50239.1| Endosomal membrane proteins, EMP70 146 5e-35 gi|115480625|ref|NP_001063906.1| Os09g0557800 [Oryza sativa (... 145 1e-34 gi|42407456|dbj|BAD10389.1| putative PHG1A protein [Oryza sat... 103 4e-22 gi|115487610|ref|NP_001066292.1| Os12g0175700 [Oryza sativa (... 96.7 4e-20 gi|115484471|ref|NP_001065897.1| Os11g0181100 [Oryza sativa (... 96.3 6e-20 gi|62734077|gb|AAX96186.1| Endomembrane protein 70 [Oryza sat... 96.3 6e-20 gi|21955292|gb|AAL07091.2| putative endomembrane protein EMP7... 95.1 1e-19 gi|18391222|ref|NP_563881.1| transporter [Arabidopsis thalian... 95.1 1e-19 gi|1931647|gb|AAB65482.1| endomembrane protein EMP70 precusor... 95.1 1e-19 gi|115446649|ref|NP_001047104.1| Os02g0552000 [Oryza sativa (... 95.1 1e-19 gi|92889078|gb|ABE89676.1| Nonaspanin (TM9SF) [Medicago truncatu 94.7 2e-19 gi|15226383|ref|NP_178306.1| transporter [Arabidopsis thalian... 94.7 2e-19 gi|92885243|gb|ABE87730.1| Nonaspanin (TM9SF) [Medicago truncatu 94.0 3e-19 gi|15223852|ref|NP_172919.1| transporter [Arabidopsis thalian... 93.6 4e-19 gi|8778208|gb|AAF79217.1|AC006917_2 F10B6.3 [Arabidopsis thalian 93.6 4e-19 gi|7527721|gb|AAF63170.1|AC010657_6 T5E21.15 [Arabidopsis thalia 93.6 4e-19 gi|9758717|dbj|BAB09103.1| endosomal protein-like [Arabidopsi... 92.4 8e-19 gi|115474915|ref|NP_001061054.1| Os08g0162000 [Oryza sativa (... 90.1 4e-18 gi|28564634|dbj|BAC57816.1| putative syntaxin SYP111 [Oryza s... 90.1 4e-18 gi|115451783|ref|NP_001049492.1| Os03g0237000 [Oryza sativa (... 89.4 7e-18 gi|115480894|ref|NP_001064040.1| Os10g0112600 [Oryza sativa (... 88.2 2e-17 gi|14029044|gb|AAK52585.1|AC079685_16 Putative endosomal prot... 88.2 2e-17 gi|115475670|ref|NP_001061431.1| Os08g0276000 [Oryza sativa (... 84.7 2e-16 gi|116054978|emb|CAL57055.1| Endosomal membrane proteins, EMP70 82.8 7e-16 gi|30693060|ref|NP_198547.2| transporter [Arabidopsis thaliana] 79.0 1e-14 gi|110739674|dbj|BAF01745.1| putative endomembrane protein EM... 76.6 5e-14 gi|15010758|gb|AAK74038.1| At1g08350/T27G7_4 [Arabidopsis tha... 67.0 4e-11 gi|18390882|ref|NP_563812.1| t-SNARE [Arabidopsis thaliana] 67.0 4e-11 gi|6664322|gb|AAF22904.1|AC006932_21 T27G7.5 [Arabidopsis thalia 61.2 2e-09 gi|62321047|dbj|BAD94118.1| putative endosomal protein [Arabidop 58.9 1e-08 gi|6010773|gb|AAF01248.1|AF187853_1 putative multispanning membr 47.4 3e-05 gi|15225585|ref|NP_179026.1| CYP705A13; heme binding / iron i... 32.3 1.0 gi|9755445|gb|AAF98206.1|AC007152_2 Putative ABC transporter [A 32.0 1.3 gi|22330476|ref|NP_176867.2| ATPase, coupled to transmembrane... 32.0 1.3 gi|12320927|gb|AAG50592.1|AC083891_6 ABC transporter, putative [ 32.0 1.3 gi|115444959|ref|NP_001046259.1| Os02g0208300 [Oryza sativa (... 31.6 1.8 gi|75321780|sp|Q5W274|PDR3_TOBAC Pleiotropic drug resistance ... 30.8 3.0 gi|75318232|sp|O24367|TUR2_SPIPO Pleiotropic drug resistance ... 30.4 3.9 gi|37724579|gb|AAO12868.1| putative ABC transporter [Vitis vinif 29.6 6.7 gi|116059348|emb|CAL55055.1| Predicted lipase/calmodulin-bind... 29.3 8.7 gi|45935025|gb|AAS79547.1| At4g11080 [Arabidopsis thaliana] >... 29.3 8.7 gi|8347246|gb|AAF74567.1|AF215853_1 hexose transporter [Solanum 29.3 8.7 gi|8347244|gb|AAF74566.1|AF215852_1 hexose transporter [Nicotian 29.3 8.7 gi|97180275|sp|Q2PCF1|PDR2_NICPL Pleiotropic drug resistance ... 29.3 8.7
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 343 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 533 Length of database: 101054579 Length adjustment: 106 Effective length of query: 427 Effective length of database: 71019585 Effective search space: 5042390535 Effective search space used: 5042390535 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)