Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168936762-6585-62679617983.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig86 Length=360
Score E Sequences producing significant alignments: (Bits) Value gi|18402657|ref|NP_565723.1| unknown protein [Arabidopsis tha... 106 3e-23 gi|115447067|ref|NP_001047313.1| Os02g0595400 [Oryza sativa (... 94.0 1e-19 gi|33147021|dbj|BAC80104.1| hypothetical protein [Oryza sativ... 43.9 2e-04 gi|50725193|dbj|BAD33944.1| hypothetical protein [Oryza sativa ( 39.7 0.003 gi|117606933|gb|ABK42021.1| vegetative cell wall protein [Chlamy 36.6 0.027 gi|21592790|gb|AAM64739.1| unknown [Arabidopsis thaliana] 36.2 0.036 gi|79327889|ref|NP_001031885.1| unknown protein [Arabidopsis tha 36.2 0.036 gi|15242165|ref|NP_196996.1| unknown protein [Arabidopsis tha... 36.2 0.036 gi|115486507|ref|NP_001068397.1| Os11g0657400 [Oryza sativa (... 35.8 0.047 gi|115444419|ref|NP_001045989.1| Os02g0164200 [Oryza sativa (... 35.8 0.047 gi|115478122|ref|NP_001062656.1| Os09g0244600 [Oryza sativa (... 35.4 0.061 gi|115460488|ref|NP_001053844.1| Os04g0612300 [Oryza sativa (... 35.4 0.061 gi|3831447|gb|AAC69930.1| putative extensin [Arabidopsis thal... 35.0 0.079 gi|62526422|gb|AAX84649.1| methionine rich arabinogalactan [Sola 35.0 0.079 gi|29150409|gb|AAO72418.1| hypothetical protein [Oryza sativa (j 35.0 0.079 gi|87162811|gb|ABD28606.1| Plant lipid transfer/seed storage/... 35.0 0.079 gi|115459228|ref|NP_001053214.1| Os04g0498700 [Oryza sativa (... 34.7 0.10 gi|544262|sp|Q03211|PEXLP_TOBAC Pistil-specific extensin-like... 34.7 0.10 gi|115479467|ref|NP_001063327.1| Os09g0450600 [Oryza sativa (... 34.3 0.14 gi|1155068|emb|CAA64425.1| cell wall-plasma membrane linker prot 34.3 0.14 gi|115436326|ref|NP_001042921.1| Os01g0329300 [Oryza sativa (... 34.3 0.14 gi|102139905|gb|ABF70054.1| protein kinase family protein [Musa 33.9 0.18 gi|13447449|gb|AAK21965.1| receptor protein kinase PERK1 [Brassi 33.9 0.18 gi|116308964|emb|CAH66089.1| H0209A05.6 [Oryza sativa (indica cu 33.5 0.23 gi|2653671|gb|AAC15893.1| 120 kDa style glycoprotein [Nicotiana 33.5 0.23 gi|87241486|gb|ABD33344.1| Pollen Ole e 1 allergen and extens... 33.5 0.23 gi|62861393|gb|AAY16798.1| early salt stress and cold acclima... 33.5 0.23 gi|600118|emb|CAA84230.1| extensin-like protein [Zea mays] >g... 33.5 0.23 gi|115443935|ref|NP_001045747.1| Os02g0125700 [Oryza sativa (... 33.1 0.30 gi|87162810|gb|ABD28605.1| Plant lipid transfer/seed storage/... 33.1 0.30 gi|53791543|dbj|BAD52665.1| unknown protein [Oryza sativa (japon 33.1 0.30 gi|115474417|ref|NP_001060805.1| Os08g0108300 [Oryza sativa (... 33.1 0.30 gi|20138131|sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein ... 33.1 0.30 gi|15240947|ref|NP_198672.1| ATP binding / kinase/ protein ki... 33.1 0.30 gi|15233717|ref|NP_193252.1| lipid binding / nutrient reservo... 33.1 0.30 gi|115445437|ref|NP_001046498.1| Os02g0265100 [Oryza sativa (... 32.7 0.39 gi|115440139|ref|NP_001044349.1| Os01g0765300 [Oryza sativa (... 32.7 0.39 gi|57899569|dbj|BAD87148.1| ubiquitin system component Cue do... 32.7 0.39 gi|62861391|gb|AAY16797.1| cold acclimation induced protein 2-1 32.7 0.39 gi|50252987|dbj|BAD29238.1| hypothetical protein [Oryza sativ... 32.7 0.39 gi|41052754|dbj|BAD07610.1| putative caffeine-induced death p... 32.7 0.39 gi|7406657|emb|CAB85622.1| putative proline-rich cell wall prote 32.7 0.39 gi|7406655|emb|CAB85621.1| putative proline-rich cell wall prote 32.7 0.39 gi|228939|prf||1814452D Hyp-rich glycoprotein 32.7 0.39 gi|119713|sp|P24152|EXTN_SORBI Extensin precursor (Proline-ri... 32.7 0.39 gi|115469632|ref|NP_001058415.1| Os06g0690100 [Oryza sativa (... 32.3 0.51 gi|110288755|gb|AAP52555.2| Protease inhibitor/seed storage/L... 32.3 0.51 gi|46850179|gb|AAT02521.1| cell wall protein GP2 [Chlamydomonas 32.3 0.51 gi|38678203|tpg|DAA02082.1| TPA: TPA_exp: transposase [Oryza ... 32.3 0.51 gi|22748417|gb|AAN05382.1| hypothetical protein [Oryza sativa (j 32.3 0.51 gi|21992|emb|CAA46283.1| extensin [Volvox carteri] 32.3 0.51 gi|2832661|emb|CAA16736.1| pherophorin - like protein [Arabid... 32.3 0.51 gi|6573752|gb|AAF17672.1|AC009398_21 F20B24.6 [Arabidopsis thali 32.3 0.51 gi|25056007|gb|AAD55980.2|AF159297_1 extensin-like protein [Zea 32.3 0.51 gi|27311270|gb|AAO00696.1| retrotransposon protein, putative,... 32.3 0.51 gi|15218591|ref|NP_172532.1| ATP binding / kinase/ protein ki... 32.3 0.51 gi|30684447|ref|NP_193591.2| unknown protein [Arabidopsis tha... 32.3 0.51 gi|22138466|gb|AAM93450.1| putative proline-rich cell wall pr... 32.3 0.51 gi|84468382|dbj|BAE71274.1| hypothetical protein [Trifolium prat 32.3 0.51 gi|1709767|sp|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein... 32.3 0.51 gi|116059946|emb|CAL56005.1| Predicted membrane protein (patc... 32.0 0.67 gi|115451937|ref|NP_001049569.1| Os03g0251000 [Oryza sativa (... 32.0 0.67 gi|102140004|gb|ABF70139.1| protein kinase family protein [Musa 32.0 0.67 gi|21554687|gb|AAM63659.1| unknown [Arabidopsis thaliana] 32.0 0.67 gi|15022163|gb|AAC49600.2| putative proline-rich protein [Solanu 32.0 0.67 gi|6692119|gb|AAF24584.1|AC007764_26 F22C12.1 [Arabidopsis thali 32.0 0.67 gi|607771|gb|AAA74419.1| arabinogalactan-like protein 32.0 0.67 gi|38637284|dbj|BAD03547.1| PWWP domain protein-like [Oryza s... 32.0 0.67 gi|115474313|ref|NP_001060753.1| Os08g0100500 [Oryza sativa (... 32.0 0.67 gi|34395167|dbj|BAC83420.1| hypothetical protein [Oryza sativ... 32.0 0.67 gi|34394712|dbj|BAC84075.1| hypothetical protein [Oryza sativa ( 32.0 0.67 gi|6523547|emb|CAB62280.1| hydroxyproline-rich glycoprotein D... 32.0 0.67 gi|488731|emb|CAA55883.1| chitinase [Beta vulgaris subsp. vul... 32.0 0.67 gi|115463835|ref|NP_001055517.1| Os05g0406900 [Oryza sativa (... 31.6 0.88 gi|108706436|gb|ABF94231.1| transposon protein, putative, CAC... 31.6 0.88 gi|1903264|emb|CAA72510.1| hypothetical protein [Pisum sativum] 31.6 0.88 gi|310923|gb|AAA34059.1| cysteine-rich extensin-like protein-1 31.6 0.88 gi|115466656|ref|NP_001056927.1| Os06g0168700 [Oryza sativa (... 31.6 0.88 gi|46806195|dbj|BAD17408.1| hypothetical protein [Oryza sativ... 31.6 0.88 gi|38344557|emb|CAD39899.2| OSJNBa0065B15.3 [Oryza sativa (japon 31.6 0.88 gi|19919|emb|CAA78398.1| Pistil extensin like protein, partia... 31.6 0.88 gi|116059082|emb|CAL54789.1| unnamed protein product [Ostreococc 31.2 1.1 gi|115472205|ref|NP_001059701.1| Os07g0496300 [Oryza sativa (... 31.2 1.1 gi|115470633|ref|NP_001058915.1| Os07g0154400 [Oryza sativa (... 31.2 1.1 gi|115464891|ref|NP_001056045.1| Os05g0516400 [Oryza sativa (... 31.2 1.1 gi|92891904|gb|ABE91006.1| hypothetical protein MtrDRAFT_AC14... 31.2 1.1 gi|92874007|gb|ABE82337.1| mucin-related [Medicago truncatula] 31.2 1.1 gi|53749286|gb|AAU90145.1| putative hydroxyproline-rich glyco... 31.2 1.1 gi|32492226|emb|CAE03677.1| OSJNBa0042N22.21 [Oryza sativa (j... 31.2 1.1 gi|2578444|emb|CAA47812.1| ptxA [Pisum sativum] 31.2 1.1 gi|14253159|emb|CAC39318.1| VMP3 protein [Volvox carteri f. naga 31.2 1.1 gi|62861389|gb|AAY16796.1| early salt stress and cold acclima... 31.2 1.1 gi|42572805|ref|NP_974499.1| unknown protein [Arabidopsis thalia 31.2 1.1 gi|435039|gb|AAA79360.1| proline-rich cell wall protein 31.2 1.1 gi|451544|gb|AAA79364.1| proline-rich cell wall protein 31.2 1.1 gi|51091286|dbj|BAD35993.1| hypothetical protein [Oryza sativ... 31.2 1.1 gi|48716720|dbj|BAD23401.1| hypothetical protein [Oryza sativa ( 31.2 1.1 gi|38346591|emb|CAE04655.2| OSJNBa0061G20.11 [Oryza sativa (j... 31.2 1.1 gi|116317890|emb|CAH65918.1| OSIGBa0102O13.9 [Oryza sativa (indi 30.8 1.5 gi|115484333|ref|NP_001065828.1| Os11g0162300 [Oryza sativa (... 30.8 1.5
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 317 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 360 Length of database: 101054579 Length adjustment: 87 Effective length of query: 273 Effective length of database: 76403216 Effective search space: 2521306128 Effective search space used: 2521306128 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)