RID=1168937101-29416-143220594099.BLASTQ1, Contig95

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168937101-29416-143220594099.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig95
Length=233

Distribution of 19 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|24417262|gb|AAN60241.1|  unknown [Arabidopsis thaliana]         34.3    0.14  
gi|75171219|sp|Q9FKA5|Y5957_ARATH  Uncharacterized protein At5...  34.3    0.14 
gi|108709631|gb|ABF97426.1|  transposon protein, putative, unc...  33.9    0.18 
gi|28269465|gb|AAO38008.1|  hypothetical protein [Oryza sativa (j  33.9    0.18  
gi|54290587|dbj|BAD61996.1|  hypothetical protein [Oryza sativa (  32.0    0.68 
gi|115452647|ref|NP_001049924.1|  Os03g0312500 [Oryza sativa (...  31.6    0.88  
gi|115469042|ref|NP_001058120.1|  Os06g0627100 [Oryza sativa (...  30.8    1.5   
gi|4262159|gb|AAD14459.1|  hypothetical protein [Arabidopsis t...  30.0    2.6  
gi|51091153|dbj|BAD35848.1|  hypothetical protein [Oryza sativa (  30.0    2.6  
gi|115480393|ref|NP_001063790.1|  Os09g0537100 [Oryza sativa (...  29.6    3.4   
gi|92883023|gb|ABE86766.1|  Stress protein DDR48 , related [Medic  29.6    3.4  
gi|13129455|gb|AAK13113.1|AC080019_5  Putative retroelement pol p  29.6    3.4   
gi|28209514|gb|AAO37532.1|  hypothetical protein [Oryza sativa...  29.3    4.4   
gi|30421166|gb|AAP31050.1|  globulin [Hordeum vulgare]             28.9    5.7  
gi|13129442|gb|AAK13100.1|AC078839_16  Hypothetical protein [Oryz  28.9    5.7  
gi|18410222|ref|NP_567015.1|  nucleic acid binding [Arabidopsi...  28.1    9.8

Alignments

 

>gi|24417262|gb|AAN60241.1|  unknown [Arabidopsis thaliana]
Length=381

 Score = 34.3 bits (77),  Expect = 0.14
 Identities = 24/45 (53%), Positives = 25/45 (55%), Gaps = 9/45 (20%)
 Frame = +1

Query  19   KSESEYGSGYGRKAeyegggseyetgygRRHEGEQGSRYGERTET  153
            K ESEYGSGYG +          E  YGRR E   GS YG RTET
Sbjct  119  KPESEYGSGYGGQT---------EVEYGRRPEQSYGSGYGGRTET  154


 Score = 29.3 bits (64),  Expect = 4.4
 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 9/51 (17%)
 Frame = +1

Query  1    GTRGTVKSESEYGSGYGRKAeyegggseyetgygRRHEGEQGSRYGERTET  153
            G  G  ++ESEYGSG G +          E  YGRR E   GS YG R+E+
Sbjct  147  GYGGRTETESEYGSGGGGRT---------EVEYGRRPESGLGSGYGGRSES  188


>gi|75171219|sp|Q9FKA5|Y5957_ARATH  Uncharacterized protein At5g39570
 gi|9758332|dbj|BAB08888.1|  unnamed protein product [Arabidopsis thaliana]
 gi|16604364|gb|AAL24188.1|  AT5g39570/MIJ24_40 [Arabidopsis thaliana]
 gi|23308191|gb|AAN18065.1|  At5g39570/MIJ24_40 [Arabidopsis thaliana]
Length=381

 Score = 34.3 bits (77),  Expect = 0.14
 Identities = 24/45 (53%), Positives = 25/45 (55%), Gaps = 9/45 (20%)
 Frame = +1

Query  19   KSESEYGSGYGRKAeyegggseyetgygRRHEGEQGSRYGERTET  153
            K ESEYGSGYG +          E  YGRR E   GS YG RTET
Sbjct  119  KPESEYGSGYGGQT---------EVEYGRRPEQSYGSGYGGRTET  154


 Score = 29.3 bits (64),  Expect = 4.4
 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 9/51 (17%)
 Frame = +1

Query  1    GTRGTVKSESEYGSGYGRKAeyegggseyetgygRRHEGEQGSRYGERTET  153
            G  G  ++ESEYGSG G +          E  YGRR E   GS YG R+E+
Sbjct  147  GYGGRTETESEYGSGGGGRT---------EVEYGRRPESGLGSGYGGRSES  188


>gi|108709631|gb|ABF97426.1|  transposon protein, putative, unclassified [Oryza sativa (japonica 
cultivar-group)]
Length=321

 Score = 33.9 bits (76),  Expect = 0.18
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 0/54 (0%)
 Frame = +2

Query  35   TGPGMAGRQSMREVDPNMRLDMDGGMRASKDRVMERGRRQDMGPAMRGRRAMVG  196
            T  G   R+S  +     ++  +GG RA + R+  R RR D  PAMR RR  VG
Sbjct  28   TTRGEEVRRSAGDAAAETQVKGEGGGRARRLRLRRRARRSDGRPAMRRRRHGVG  81


>gi|28269465|gb|AAO38008.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=356

 Score = 33.9 bits (76),  Expect = 0.18
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 0/54 (0%)
 Frame = +2

Query  35   TGPGMAGRQSMREVDPNMRLDMDGGMRASKDRVMERGRRQDMGPAMRGRRAMVG  196
            T  G   R+S  +     ++  +GG RA + R+  R RR D  PAMR RR  VG
Sbjct  63   TTRGEEVRRSAGDAAAETQVKGEGGGRARRLRLRRRARRSDGRPAMRRRRHGVG  116


>gi|54290587|dbj|BAD61996.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=146

 Score = 32.0 bits (71),  Expect = 0.68
 Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = +2

Query  50   AGRQSMREVDPNMRLDMDGGMRASKDRVMER---GRRQDMGPAMRGRRAMVGRSMEERGV  220
            AG    R   P  RL+ DG  R    R   R   GR +  GP  RG  A+VG   E  G 
Sbjct  61   AGGGRRRSSWPRRRLEADGNARRGCGRGERRRRGGRWRSSGPRRRGEAALVGAVAEAGGG  120

Query  221  SMRG  232
            +  G
Sbjct  121  AEAG  124


>gi|115452647|ref|NP_001049924.1|  Os03g0312500 [Oryza sativa (japonica cultivar-group)]
 gi|113548395|dbj|BAF11838.1|  Os03g0312500 [Oryza sativa (japonica cultivar-group)]
Length=194

 Score = 31.6 bits (70),  Expect = 0.88
 Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
 Frame = +2

Query  2    ARGVR*SLNLNTGPGMAGRQSMREVDPNMRLDMDGGMRASKDRVMERGRRQDMGPAMRGR  181
            ARGV  S      PG  G +  R    + R D  GG +A    + +RG   +  P  RGR
Sbjct  15   ARGVGGSA-ATARPGAGGGRGAR----HNREDACGGGQAGSRTLPQRGAGGEAPPDERGR  69

Query  182  RAMVGRSMEERGVSMR  229
              + GR  E RG   R
Sbjct  70   AGVDGRCQEPRGCRRR  85


>gi|115469042|ref|NP_001058120.1|  Os06g0627100 [Oryza sativa (japonica cultivar-group)]
 gi|113596160|dbj|BAF20034.1|  Os06g0627100 [Oryza sativa (japonica cultivar-group)]
Length=171

 Score = 30.8 bits (68),  Expect = 1.5
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 0/42 (0%)
 Frame = +2

Query  107  GMRASKDRVMERGRRQDMGPAMRGRRAMVGRSMEERGVSMRG  232
            G  A   R   RGRR  M  A R + A  GR+++ RG++ RG
Sbjct  33   GTSAGGRRRKRRGRRWPMPGAARAQLADGGRTVKARGITFRG  74


>gi|4262159|gb|AAD14459.1|  hypothetical protein [Arabidopsis thaliana]
 gi|7270201|emb|CAB77816.1|  hypothetical protein [Arabidopsis thaliana]
Length=562

 Score = 30.0 bits (66),  Expect = 2.6
 Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 5/35 (14%)
 Frame = +2

Query  53   GRQSMREVDPN-----MRLDMDGGMRASKDRVMER  142
            GRQS++++DPN     +  D+DG + AS  +V ER
Sbjct  85   GRQSLQKLDPNRPPGTLWFDIDGSIAASVRKVFER  119


>gi|51091153|dbj|BAD35848.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=275

 Score = 30.0 bits (66),  Expect = 2.6
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
 Frame = +2

Query  38   GPGMAGRQSMR-----EVDPNMRLDMDGGMRASKDRVMERGRRQDMGPAMRGRRAMVG  196
            G   AGR  +R     E     ++  +GG R  + R+    RR D  PAMR RR  VG
Sbjct  7    GRAAAGRGGVRGCGGGEAAAETQVKGEGGGRVRRLRLRRGARRSDGRPAMRRRRHGVG  64


>gi|115480393|ref|NP_001063790.1|  Os09g0537100 [Oryza sativa (japonica cultivar-group)]
 gi|113632023|dbj|BAF25704.1|  Os09g0537100 [Oryza sativa (japonica cultivar-group)]
Length=117

 Score = 29.6 bits (65),  Expect = 3.4
 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = -3

Query  150  LRPLSITRSLLALMPPSISSLIFGSTSLILCLPAIPGPVFRFRLHRTPRA  1
            LRP+   RSL    PPS S L+  +T     LPA   P  R     TP+A
Sbjct  21   LRPMPSRRSL----PPSSSDLVPATTVSCFWLPASTSPTARSSTAPTPQA  66


>gi|92883023|gb|ABE86766.1|  Stress protein DDR48 , related [Medicago truncatula]
Length=411

 Score = 29.6 bits (65),  Expect = 3.4
 Identities = 19/50 (38%), Positives = 20/50 (40%), Gaps = 16/50 (32%)
 Frame = +1

Query  1    GTRGTVKSESEYGSGYGRKAeyegggseyetgygRRHEGEQGSRYGERTE  150
            G  G    E EYGSGYGRK                  E E GS YG R +
Sbjct  138  GYGGGGAQEGEYGSGYGRK----------------NEESEYGSGYGGRKQ  171


 Score = 29.3 bits (64),  Expect = 4.4
 Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 15/47 (31%)
 Frame = +1

Query  10   GTVKSESEYGSGYGRKAeyegggseyetgygRRHEGEQGSRYGERTE  150
            G  K E EYGSGYG                G   EGE GS YG + E
Sbjct  127  GGRKQEGEYGSGYG---------------GGGAQEGEYGSGYGRKNE  158


>gi|13129455|gb|AAK13113.1|AC080019_5  Putative retroelement pol polyprotein [Oryza sativa]
Length=893

 Score = 29.6 bits (65),  Expect = 3.4
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 0/38 (0%)
 Frame = +2

Query  101  DGGMRASKDRVMERGRRQDMGPAMRGRRAMVGRSMEER  214
            DGG  +S   V   G R+D+  A R  RA+  R++E R
Sbjct  166  DGGKLSSGRPVSSSGSRRDLAAATRAGRALATRTVEAR  203


>gi|28209514|gb|AAO37532.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
 gi|29150359|gb|AAO72368.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=140

 Score = 29.3 bits (64),  Expect = 4.4
 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = +2

Query  44   GMAGRQSMREVDPNMRLDMDGGMRASKDRVMERGRRQDMGPAMRGRRA  187
            G+    S  E  P  R    GG  A   R   RGRR+D G + RGR A
Sbjct  3    GIETLMSRTEAGPRARGGRKGGRPAGDGR---RGRRRDDGSSYRGREA  47


>gi|30421166|gb|AAP31050.1|  globulin [Hordeum vulgare]
Length=224

 Score = 28.9 bits (63),  Expect = 5.7
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 0/39 (0%)
 Frame = +2

Query  107  GMRASKDRVMERGRRQDMGPAMRGRRAMVGRSMEERGVS  223
            G R S  R M R   Q M P   GRR   G   +E+G S
Sbjct  83   GCRCSALRGMVRDYEQSMPPLREGRRRSSGERQQEQGCS  121


>gi|13129442|gb|AAK13100.1|AC078839_16  Hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=236

 Score = 28.9 bits (63),  Expect = 5.7
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +2

Query  95   DMDGGMRASKDRVMERGRRQDMGPAMRGRRAMVGRSMEERG  217
            D+  G R +K R  E GRR   G A RGR+   G +  ERG
Sbjct  146  DLPAGSRHTKRRHQE-GRRGGEGVAERGRQRRSGTTGRERG  185


>gi|18410222|ref|NP_567015.1|  nucleic acid binding [Arabidopsis thaliana]
 gi|18410226|ref|NP_567016.1|  nucleic acid binding [Arabidopsis thaliana]
 gi|7019653|emb|CAB75754.1|  spliceosomal-like protein [Arabidopsis thaliana]
 gi|7019655|emb|CAB75756.1|  spliceosomal-like protein [Arabidopsis thaliana]
Length=1214

 Score = 28.1 bits (61),  Expect = 9.8
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = -3

Query  141  LSITRS-LLALMPPSISSLIFGSTSLILCLPAIP--GPVFRFRLHRTP  7
            LS +RS  L L PP + S+     S +LCL + P  G + R   H TP
Sbjct  681  LSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTP  728

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.302    0.126    0.352 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 128
Number of extensions: 4
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 233
Length of database: 101054579
Length adjustment: 48
Effective length of query: 185
Effective length of database: 87453827
Effective search space: 2536160983
Effective search space used: 2536160983
T: 12
A: 40
X1: 16 (7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)