Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169014196-21088-110638071312.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig367 Length=126
Score E Sequences producing significant alignments: (Bits) Value gi|18412932|ref|NP_567292.1| unknown protein [Arabidopsis tha... 83.2 3e-16 gi|7267293|emb|CAB81075.1| putative protein [Arabidopsis thalian 83.2 3e-16 gi|92884712|gb|ABE87454.1| C2; Arf GTPase activating protein [Me 82.0 6e-16 gi|110738686|dbj|BAF01268.1| hypothetical protein [Arabidopsis t 81.6 7e-16 gi|21594052|gb|AAM65970.1| putative GTPase activating protein [A 81.6 7e-16 gi|18415638|ref|NP_567620.1| ZAC; ARF GTPase activator [Arabi... 81.6 7e-16 gi|51090370|dbj|BAD35631.1| putative zinc finger and C2 domai... 79.3 4e-15 gi|34304192|gb|AAQ63183.1| zinc finger protein F35 [Oryza sat... 77.8 1e-14 gi|49388351|dbj|BAD25461.1| putative zinc finger and C2 domai... 77.8 1e-14 gi|2911073|emb|CAA17535.1| putative protein [Arabidopsis thal... 76.3 3e-14 gi|115444853|ref|NP_001046206.1| Os02g0198300 [Oryza sativa (... 68.9 5e-12 gi|115448375|ref|NP_001047967.1| Os02g0722500 [Oryza sativa (... 67.8 1e-11 gi|6648206|gb|AAF21204.1|AC013483_28 putative GTPase activating 67.4 1e-11 gi|30680493|ref|NP_187451.2| unknown protein [Arabidopsis tha... 67.4 1e-11 gi|92885092|gb|ABE87612.1| Arf GTPase activating protein [Med... 63.5 2e-10 gi|92876968|gb|ABE84233.1| Arf GTPase activating protein [Medica 62.8 4e-10 gi|10441352|gb|AAG17004.1|AF184144_1 ARF GAP-like zinc finger... 62.8 4e-10 gi|21618169|gb|AAM67219.1| ARF GAP-like zinc finger-containin... 62.8 4e-10 gi|115472801|ref|NP_001059999.1| Os07g0563800 [Oryza sativa (... 62.8 4e-10 gi|18423615|ref|NP_568807.1| DNA binding [Arabidopsis thalian... 62.8 4e-10 gi|115442263|ref|NP_001045411.1| Os01g0951100 [Oryza sativa (... 62.0 6e-10 gi|110737199|dbj|BAF00548.1| hypothetical protein [Arabidopsis t 60.8 1e-09 gi|15229090|ref|NP_188393.1| DNA binding [Arabidopsis thaliana] 60.8 1e-09 gi|9294154|dbj|BAB02056.1| unnamed protein product [Arabidopsis 60.8 1e-09 gi|115463607|ref|NP_001055403.1| Os05g0382000 [Oryza sativa (... 59.7 3e-09 gi|116056719|emb|CAL53008.1| GTPase-activating protein Centau... 58.5 7e-09 gi|18403775|ref|NP_565801.1| ATP binding / DNA binding [Arabi... 55.5 6e-08 gi|42571059|ref|NP_973603.1| ATP binding / DNA binding [Arabidop 55.5 6e-08 gi|57222447|gb|AAW39027.1| putative zinc finger protein [Oryz... 55.1 7e-08 gi|115456669|ref|NP_001051935.1| Os03g0854100 [Oryza sativa (... 55.1 7e-08 gi|71535005|gb|AAZ32900.1| zinc finger Glo3-like protein [Medica 55.1 7e-08 gi|116054919|emb|CAL56996.1| Putative GTPase activating prote... 54.7 1e-07 gi|87240335|gb|ABD32193.1| Arf GTPase activating protein [Medica 54.7 1e-07 gi|15237500|ref|NP_199487.1| DNA binding [Arabidopsis thalian... 54.3 1e-07 gi|115483614|ref|NP_001065477.1| Os10g0574800 [Oryza sativa (... 53.9 2e-07 gi|10176916|dbj|BAB10160.1| GCN4-complementing protein homolog [ 53.1 3e-07 gi|110738738|dbj|BAF01293.1| hypothetical protein [Arabidopsis t 53.1 3e-07 gi|20197515|gb|AAD15467.2| unknown protein [Arabidopsis thaliana 53.1 3e-07 gi|7529285|emb|CAB86637.1| putative protein [Arabidopsis thalian 53.1 3e-07 gi|76573333|gb|ABA46771.1| unknown [Solanum tuberosum] 53.1 3e-07 gi|15240398|ref|NP_201004.1| unknown protein [Arabidopsis thalia 53.1 3e-07 gi|79512687|ref|NP_196834.3| VAN3 (VASCULAR NETWORK DEFECTIVE... 53.1 3e-07 gi|115480083|ref|NP_001063635.1| Os09g0510700 [Oryza sativa (... 52.4 5e-07 gi|2894598|emb|CAA17132.1| putative protein [Arabidopsis thal... 52.4 5e-07 gi|13430530|gb|AAK25887.1|AF360177_1 unknown protein [Arabidopsi 52.4 5e-07 gi|79325147|ref|NP_001031658.1| UBP20 (UBIQUITIN-SPECIFIC PRO... 52.4 5e-07 gi|15219822|ref|NP_176283.1| unknown protein [Arabidopsis tha... 52.4 5e-07 gi|84453190|dbj|BAE71192.1| putative Asp1 [Trifolium pratense... 52.4 5e-07 gi|51968646|dbj|BAD43015.1| unknown protein [Arabidopsis thalian 52.4 5e-07 gi|18414983|ref|NP_567543.1| UBP20 (UBIQUITIN-SPECIFIC PROTEA... 52.4 5e-07 gi|15224315|ref|NP_181291.1| ASP1 (PDE1 SUPPRESSOR 1); DNA bi... 52.4 5e-07 gi|115452251|ref|NP_001049726.1| Os03g0278400 [Oryza sativa (... 52.0 6e-07 gi|15231865|ref|NP_190939.1| DNA binding [Arabidopsis thalian... 52.0 6e-07 gi|10441356|gb|AAG17006.1|AF184146_1 ARF GAP-like zinc finger... 52.0 6e-07 gi|116057618|emb|CAL53821.1| GTPase-activating protein Centau... 51.6 8e-07 gi|116061230|emb|CAL56618.1| GTPase-activating protein Centau... 51.2 1e-06 gi|115477541|ref|NP_001062366.1| Os08g0537600 [Oryza sativa (... 51.2 1e-06 gi|30681946|ref|NP_172556.2| unknown protein [Arabidopsis tha... 51.2 1e-06 gi|1931654|gb|AAB65489.1| BRCA1-associated RING domain protei... 51.2 1e-06 gi|38175545|dbj|BAD01238.1| putative ARF GTPase-activating do... 51.2 1e-06 gi|115447447|ref|NP_001047503.1| Os02g0632500 [Oryza sativa (... 49.3 4e-06
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 16, 2007 5:53 PM Number of letters in database: 101,065,385 Number of sequences in database: 283,397 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283397 Number of Hits to DB: 87 Number of extensions: 0 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 126 Length of database: 101065385 Length adjustment: 16 Effective length of query: 110 Effective length of database: 96531033 Effective search space: 2509806858 Effective search space used: 2509806858 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)