Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169017538-9161-37218552223.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig416 Length=300
Score E Sequences producing significant alignments: (Bits) Value gi|6688818|emb|CAB65284.1| putative wound-induced protein [Medic 84.7 9e-17 gi|30681389|ref|NP_849355.1| unknown protein [Arabidopsis tha... 75.9 4e-14 gi|15234987|ref|NP_192765.1| unknown protein [Arabidopsis tha... 74.7 9e-14 gi|19320|emb|CAA42537.1| wound induced protein [Solanum lycopers 74.3 1e-13 gi|115460812|ref|NP_001054006.1| Os04g0635300 [Oryza sativa (... 68.2 8e-12 gi|115460818|ref|NP_001054009.1| Os04g0635600 [Oryza sativa (... 68.2 8e-12 gi|90265178|emb|CAH67649.1| H0410G08.4 [Oryza sativa (indica ... 68.2 8e-12 gi|90265180|emb|CAH67651.1| H0410G08.6 [Oryza sativa (indica ... 68.2 8e-12 gi|38344803|emb|CAE03004.2| OSJNBa0043L09.23 [Oryza sativa (japo 68.2 8e-12 gi|38344805|emb|CAE03006.2| OSJNBa0043L09.25 [Oryza sativa (japo 68.2 8e-12 gi|115460810|ref|NP_001054005.1| Os04g0635100 [Oryza sativa (... 68.2 8e-12 gi|90265182|emb|CAH67653.1| H0410G08.8 [Oryza sativa (indica cul 67.8 1e-11 gi|115460816|ref|NP_001054008.1| Os04g0635500 [Oryza sativa (... 64.7 9e-11 gi|21618257|gb|AAM67307.1| unknown [Arabidopsis thaliana] 55.8 4e-08 gi|15234992|ref|NP_195082.1| unknown protein [Arabidopsis tha... 54.3 1e-07 gi|115475065|ref|NP_001061129.1| Os08g0178500 [Oryza sativa (... 46.2 3e-05 gi|115460814|ref|NP_001054007.1| Os04g0635400 [Oryza sativa (... 45.8 5e-05 gi|115460808|ref|NP_001054004.1| Os04g0635000 [Oryza sativa (... 45.8 5e-05 gi|115469584|ref|NP_001058391.1| Os06g0683700 [Oryza sativa (... 44.3 1e-04 gi|52076652|dbj|BAD45552.1| unknown protein [Oryza sativa (japon 44.3 1e-04 gi|15225570|ref|NP_179023.1| unknown protein [Arabidopsis tha... 33.5 0.23
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 16, 2007 5:53 PM Number of letters in database: 101,065,385 Number of sequences in database: 283,397 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283397 Number of Hits to DB: 159 Number of extensions: 4 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 300 Length of database: 101065385 Length adjustment: 69 Effective length of query: 231 Effective length of database: 81510992 Effective search space: 2526840752 Effective search space used: 2526840752 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)