Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169017979-3921-138737394577.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig422 Length=456
Score E Sequences producing significant alignments: (Bits) Value gi|77403665|dbj|BAE46411.1| hypothetical protein [Solanum tubero 107 1e-23 gi|62321662|dbj|BAD95285.1| hypothetical protein [Arabidopsis th 78.2 1e-14 gi|21618251|gb|AAM67301.1| unknown [Arabidopsis thaliana] 78.2 1e-14 gi|42572469|ref|NP_974330.1| unknown protein [Arabidopsis thalia 78.2 1e-14 gi|18401669|ref|NP_566590.1| unknown protein [Arabidopsis tha... 78.2 1e-14 gi|61097812|dbj|BAD04852.2| hypothetical protein [Nicotiana bent 77.4 2e-14 gi|39652276|dbj|BAD04851.1| hypothetical protein [Solanum tubero 77.4 2e-14 gi|12324750|gb|AAG52332.1|AC011663_11 hypothetical protein; 4927 61.2 1e-09 gi|22330549|ref|NP_177227.2| unknown protein [Arabidopsis thalia 61.2 1e-09 gi|17064878|gb|AAL32593.1| Unknown protein [Arabidopsis thali... 59.3 5e-09 gi|8778689|gb|AAF79697.1|AC020889_5 T1N15.11 [Arabidopsis thalia 57.4 2e-08 gi|61742534|gb|AAX55088.1| hypothetical protein At1g48500 [Ar... 57.4 2e-08 gi|15221205|ref|NP_175283.1| unknown protein [Arabidopsis thalia 57.4 2e-08 gi|79321092|ref|NP_001031264.1| unknown protein [Arabidopsis tha 53.9 2e-07 gi|50251455|dbj|BAD28520.1| unknown protein [Oryza sativa (japon 53.9 2e-07 gi|115479055|ref|NP_001063121.1| Os09g0401300 [Oryza sativa (... 53.9 2e-07 gi|115461006|ref|NP_001054103.1| Os04g0653000 [Oryza sativa (... 50.1 3e-06 gi|32488878|emb|CAE03550.1| OSJNBa0060D06.16 [Oryza sativa (japo 50.1 3e-06 gi|118154067|gb|ABK63978.1| ZIM motif-containing protein [Tritic 48.9 7e-06 gi|21593416|gb|AAM65383.1| unknown [Arabidopsis thaliana] 47.8 2e-05 gi|42571543|ref|NP_973862.1| unknown protein [Arabidopsis thalia 47.8 2e-05 gi|18394706|ref|NP_564075.1| unknown protein [Arabidopsis tha... 47.8 2e-05 gi|2244828|emb|CAB10251.1| hypothetical protein [Arabidopsis ... 47.4 2e-05 gi|30682967|ref|NP_193208.2| unknown protein [Arabidopsis tha... 47.4 2e-05 gi|30682959|ref|NP_567442.2| unknown protein [Arabidopsis tha... 46.6 4e-05 gi|2244827|emb|CAB10250.1| hypothetical protein [Arabidopsis ... 46.6 4e-05 gi|42572903|ref|NP_974548.1| unknown protein [Arabidopsis thalia 46.6 4e-05 gi|21592605|gb|AAM64554.1| unknown [Arabidopsis thaliana] 44.7 1e-04 gi|18410737|ref|NP_565096.1| unknown protein [Arabidopsis tha... 44.7 1e-04 gi|115473339|ref|NP_001060268.1| Os07g0615200 [Oryza sativa (... 44.3 2e-04 gi|16604489|gb|AAL24250.1| At1g19180/T29M8_5 [Arabidopsis thalia 43.9 2e-04 gi|115476506|ref|NP_001061849.1| Os08g0428400 [Oryza sativa (... 43.1 4e-04 gi|108708686|gb|ABF96481.1| ZIM motif family protein, express... 42.0 0.001 gi|115453443|ref|NP_001050322.1| Os03g0402800 [Oryza sativa (... 42.0 0.001 gi|17154783|gb|AAL35984.1|AF104397_1 unknown [Cucumis sativus] 42.0 0.001 gi|108710446|gb|ABF98241.1| GATA transcription factor 27, put... 40.8 0.002 gi|115454631|ref|NP_001050916.1| Os03g0684000 [Oryza sativa (... 40.8 0.002 gi|21554328|gb|AAM63435.1| unknown [Arabidopsis thaliana] 40.4 0.003 gi|18418038|ref|NP_567898.1| unknown protein [Arabidopsis tha... 40.4 0.003 gi|115451133|ref|NP_001049167.1| Os03g0180900 [Oryza sativa (... 39.7 0.005 gi|115451135|ref|NP_001049168.1| Os03g0181100 [Oryza sativa (... 37.4 0.022 gi|24960746|gb|AAN65440.1| Unknown protein [Oryza sativa (jap... 37.4 0.022 gi|121489771|emb|CAK18857.1| Zinc-finger protein (ZIM) precursor 37.0 0.029 gi|18410088|ref|NP_565043.1| unknown protein [Arabidopsis tha... 35.8 0.065 gi|18394473|ref|NP_564019.1| unknown protein [Arabidopsis tha... 35.8 0.065 gi|21593242|gb|AAM65191.1| unknown [Arabidopsis thaliana] 35.4 0.085 gi|15229286|ref|NP_189930.1| unknown protein [Arabidopsis tha... 35.4 0.085 gi|15242096|ref|NP_197590.1| unknown protein [Arabidopsis tha... 35.0 0.11 gi|8099338|gb|AAF72099.1|AF146690_1 Pto-responsive gene 1 protei 33.9 0.25 gi|115481840|ref|NP_001064513.1| Os10g0392400 [Oryza sativa (... 33.9 0.25 gi|115481836|ref|NP_001064511.1| Os10g0391400 [Oryza sativa (... 33.9 0.25 gi|115451131|ref|NP_001049166.1| Os03g0180800 [Oryza sativa (... 33.5 0.32 gi|92877257|gb|ABE84420.1| Ribonuclease H [Medicago truncatula] 32.7 0.55 gi|47174868|gb|AAT12424.1| male-specific transcription factor... 32.3 0.72 gi|115469738|ref|NP_001058468.1| Os06g0698900 [Oryza sativa (... 32.0 0.94 gi|53791868|dbj|BAD53990.1| putative zinc-finger protein [Ory... 32.0 0.94 gi|3063713|emb|CAA18604.1| putative protein [Arabidopsis thal... 31.6 1.2 gi|15028099|gb|AAK76580.1| putative flowering protein CONSTANS [ 30.8 2.1 gi|12321671|gb|AAG50873.1|AC025294_11 hypothetical protein [A... 30.8 2.1 gi|21537322|gb|AAM61663.1| flowering protein CONSTANS, putative 30.8 2.1 gi|30686115|ref|NP_850618.1| ZML1 (ZIM-LIKE 1); transcription... 30.8 2.1 gi|115479359|ref|NP_001063273.1| Os09g0439200 [Oryza sativa (... 30.8 2.1 gi|18402914|ref|NP_566676.1| ZML1 (ZIM-LIKE 1); transcription... 30.8 2.1 gi|18403600|ref|NP_564593.1| ZML2 (ZIM-LIKE 2); transcription... 30.8 2.1 gi|92895177|gb|ABE92609.1| Ribonuclease H [Medicago truncatula] 30.0 3.6 gi|92891797|gb|ABE90956.1| ZIM [Medicago truncatula] 29.6 4.7 gi|77551602|gb|ABA94399.1| Ubiquitin carboxyl-terminal hydrol... 29.6 4.7 gi|14029019|gb|AAK52560.1|AC079853_13 Unknown protein [Oryza ... 29.3 6.1 gi|115461887|ref|NP_001054543.1| Os05g0129200 [Oryza sativa (... 28.9 7.9 gi|92890226|gb|ABE90243.1| RNA-directed DNA polymerase (Rever... 28.9 7.9 gi|115464237|ref|NP_001055718.1| Os05g0454200 [Oryza sativa (... 28.9 7.9
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 16, 2007 5:53 PM Number of letters in database: 101,065,385 Number of sequences in database: 283,397 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283397 Number of Hits to DB: 292 Number of extensions: 3 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 456 Length of database: 101065385 Length adjustment: 103 Effective length of query: 353 Effective length of database: 71875494 Effective search space: 3521899206 Effective search space used: 3521899206 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 62 (28.5 bits)