Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168929717-13698-54409765413.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig120 Length=625
Score E Sequences producing significant alignments: (Bits) Value gi|70609690|gb|AAZ05070.1| glutamate decarboxylase [Citrus sinen 257 9e-89 gi|115476804|ref|NP_001061998.1| Os08g0465800 [Oryza sativa (... 253 4e-88 gi|42409426|dbj|BAD10771.1| putative glutamate decarboxylase ... 253 4e-88 gi|21536919|gb|AAM61251.1| glutamate decarboxylase, putative [Ar 251 4e-88 gi|15229517|ref|NP_188403.1| calmodulin binding [Arabidopsis ... 251 4e-88 gi|115458630|ref|NP_001052915.1| Os04g0447400 [Oryza sativa (... 248 9e-88 gi|21321781|gb|AAM47304.1|AF377946_6 putative glutamate carbo... 253 1e-87 gi|115454997|ref|NP_001051099.1| Os03g0720300 [Oryza sativa (... 253 1e-87 gi|13752462|gb|AAK38667.1|AF353615_1 glutamate decarboxylase iso 249 3e-87 gi|15226852|ref|NP_178309.1| calmodulin binding [Arabidopsis ... 248 1e-86 gi|1169238|sp|Q07346|DCE_PETHY Glutamate decarboxylase (GAD) ... 251 2e-86 gi|21327029|gb|AAM48129.1|AF506366_1 glutamate decarboxylase [Ni 253 2e-86 gi|19070761|gb|AAL83983.1| glutamate decarboxylase [Oryza sativa 250 2e-86 gi|13310813|gb|AAK18620.1|AF352732_1 glutamate decarboxylase iso 253 4e-86 gi|3252856|gb|AAC24195.1| glutamate decarboxylase isozyme 1 [Nic 253 4e-86 gi|15226854|ref|NP_178310.1| calmodulin binding [Arabidopsis ... 247 5e-86 gi|45935270|gb|AAS79670.1| glutamate decarboxylase 4a [Brassica 245 9e-86 gi|1777921|gb|AAB40608.1| glutamate decarboxylase 249 3e-85 gi|2494175|sp|Q42472|DCE2_ARATH Glutamate decarboxylase 2 (GA... 250 3e-85 gi|19698825|gb|AAL91148.1| glutamate decarboxylase, putative [Ar 250 3e-85 gi|79372430|ref|NP_176771.2| GAD2 (GLUTAMATE DECARBOXYLASE 2)... 250 3e-85 gi|75268007|gb|ABA18652.1| glutamate decarboxylase [Populus trem 249 6e-85 gi|16226294|gb|AAL16126.1|AF428294_1 At1g65960/F12P19_12 [Arabid 250 1e-84 gi|3252854|gb|AAC39483.1| glutamate decarboxylase isozyme 2 [Nic 250 1e-84 gi|45935272|gb|AAS79671.1| glutamate decarboxylase 4b [Brassica 243 1e-84 gi|497979|gb|AAA93132.1| glutamate decarboxylase 248 2e-84 gi|15237949|ref|NP_197235.1| GAD; calmodulin binding [Arabido... 248 2e-84 gi|45935268|gb|AAS79669.1| glutamate decarboxylase 2 [Brassica j 247 3e-84 gi|115451779|ref|NP_001049490.1| Os03g0236200 [Oryza sativa (... 246 4e-84 gi|92890130|gb|ABE90159.1| Pyridoxal-dependent decarboxylase [Me 249 1e-83 gi|55832255|gb|AAV65329.1| putative glutamate decarboxylase [Hor 241 3e-82 gi|32493114|gb|AAP85548.1| putative glutamate decarboxylase [Gly 243 4e-82 gi|31296711|gb|AAP46640.1| GAD1 [Hordeum vulgare] 237 5e-81 gi|75268060|gb|ABA18653.1| glutamate decarboxylase [Pinus pinast 244 3e-80 gi|92875133|gb|ABE83262.1| Pyridoxal-dependent decarboxylase [Me 240 2e-79 gi|51587340|emb|CAG30580.1| glutamate decarboxylase 1 [Lotus jap 249 5e-74 gi|1706318|sp|P54767|DCE_LYCES Glutamate decarboxylase (GAD) ... 256 6e-68 gi|115458638|ref|NP_001052919.1| Os04g0447800 [Oryza sativa (... 248 2e-65 gi|13111470|dbj|BAB32869.1| glutamate decarboxylase [Oryza sa... 248 2e-65 gi|59940382|gb|AAX12729.1| glutamate decarboxylase [Oryza sativa 195 1e-49 gi|45935274|gb|AAS79672.1| glutamate decarboxylase 1 [Brassica j 74.7 3e-13 gi|95116497|gb|ABF56162.1| putative glutamate decarboxylase [The 64.3 3e-10 gi|15217780|ref|NP_174119.1| carboxy-lyase [Arabidopsis thali... 55.5 2e-07 gi|48475182|gb|AAT44251.1| unknown protein [Oryza sativa (japoni 52.0 2e-06 gi|62632703|gb|AAX89367.1| sphingosine-1-phosphate lyase [Ory... 50.1 7e-06 gi|116061583|emb|CAL52301.1| putative sphingosine-1-phosphate... 48.9 1e-05 gi|15229510|ref|NP_188399.1| carboxy-lyase [Arabidopsis thaliana 48.5 2e-05 gi|9294585|dbj|BAB02866.1| unnamed protein product [Arabidopsis 48.5 2e-05 gi|38347254|emb|CAE05435.2| OSJNBa0059H15.18 [Oryza sativa (j... 48.1 3e-05 gi|92887141|gb|ABE88659.1| hypothetical protein MtrDRAFT_AC14... 46.6 7e-05 gi|110816414|sp|Q52RG7|SGPL_ORYSA Sphingosine-1-phosphate lya... 46.2 1e-04 gi|92891996|gb|ABE91040.1| probable histidine decarboxylase [... 46.2 1e-04 gi|52076595|dbj|BAD45497.1| putative sphingosine-1-phosphate ... 42.0 0.002 gi|15128439|dbj|BAB62623.1| putative sphingosine-1-phosphate ... 42.0 0.002 gi|92429387|gb|ABE77151.1| aromatic amino acid decarboxylase 2 [ 41.2 0.003 gi|92429383|gb|ABE77149.1| aromatic amino acid decarboxylase 1A 39.7 0.009 gi|92429385|gb|ABE77150.1| aromatic amino acid decarboxylase 1B 38.9 0.015 gi|1706319|sp|P54772|DCHS_LYCES Histidine decarboxylase (HDC)... 35.8 0.13 gi|62132461|gb|AAX69013.1| 4-coumarate: coenzyme A ligase [Pinus 32.0 1.9 gi|53792618|dbj|BAD53632.1| putative arogenate dehydrogenase ... 31.6 2.5 gi|21693587|gb|AAM75356.1|AF519805_1 putative serine/threonine p 30.8 4.2 gi|116060586|emb|CAL55922.1| unnamed protein product [Ostreococc 30.0 7.1 gi|8347358|gb|AAF74605.1|AF244768_1 integrase [Oryza officinalis 30.0 7.1 gi|115450959|ref|NP_001049080.1| Os03g0167200 [Oryza sativa (... 29.6 9.3 gi|11994142|dbj|BAB01163.1| unnamed protein product [Arabidopsis 29.6 9.3
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 441 Number of extensions: 4 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 625 Length of database: 101054579 Length adjustment: 108 Effective length of query: 517 Effective length of database: 70452887 Effective search space: 7045288700 Effective search space used: 7045288700 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 65 (29.6 bits)